Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- XR_001748845.2
- Aligned Length:
- 2395
- Identities:
- 1347
- Gaps:
- 1032
Alignment
Query 1 -----------------------------------------------------------ATGATTTTATTTTGA 15
| ||||.|.|||
Sbjct 1 AGCTGTGCGACGCGCCGGGCCTCCTCGCCTTTGTGCCATCCGGGTCTCTCGCGCGAGCGA----TTTAGTCTGA 70
Query 16 ----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC 74
|.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.|
Sbjct 71 GGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTCT-------------- 126
Query 75 TTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 137
||| ||| ||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 127 ------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 187
Query 138 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 261
Query 212 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 335
Query 286 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 409
Query 360 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 483
Query 434 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 557
Query 508 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 631
Query 582 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 705
Query 656 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 779
Query 730 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 803
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 780 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 853
Query 804 GGAAGCTTTAGCTAGAAG-------------------------------------------------------- 821
||||||||||||||||||
Sbjct 854 GGAAGCTTTAGCTAGAAGAGAAGACGGGGTCTCCCTATGTTGCCCAGGCTGGTAACACAGTGTAACCTGATGTG 927
Query 822 ----------------------------------------------------GTTGGAAAGGGCAAAGAAATTA 843
||||||||||||||||||||||
Sbjct 928 CTTCCCTGGGAACCCAGCCTGACAGAAACTGCAGCTGAACAGCAGCAAAAGTGTTGGAAAGGGCAAAGAAATTA 1001
Query 844 CAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGG 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 CAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGG 1075
Query 918 TTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 TTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGA 1149
Query 992 TGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTT 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 TGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTT 1223
Query 1066 AATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATC 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 AATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATC 1297
Query 1140 CCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGG 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 CCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGG 1371
Query 1214 GTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAA 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 GTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAA 1445
Query 1288 GAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTT 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 GAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTT 1519
Query 1362 GGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT------------------------------------- 1398
|||||||||||||||||||||||||||||||||||||
Sbjct 1520 GGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAG 1593
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1594 ACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACT 1667
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1668 TTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTA 1741
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1742 AACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAAT 1815
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1816 ATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTA 1889
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1890 CTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTG 1963
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1964 GCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTG 2037
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2038 TTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGA 2111
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2112 AAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGT 2185
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2186 GAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTG 2259
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2260 GTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTT 2333
Query 1399 --------------------------- 1398
Sbjct 2334 TTATTTTAATAAAGTGCCTTATAACAA 2360
