Nucleotide Global Alignment

Description

Query:
TRCN0000489543
Subject:
XR_001748845.2
Aligned Length:
2395
Identities:
1347
Gaps:
1032

Alignment

Query    1  -----------------------------------------------------------ATGATTTTATTTTGA  15
                                                                       |    ||||.|.|||
Sbjct    1  AGCTGTGCGACGCGCCGGGCCTCCTCGCCTTTGTGCCATCCGGGTCTCTCGCGCGAGCGA----TTTAGTCTGA  70

Query   16  ----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC  74
                      |.|  ||.|.||.||.| |||    ||.||||.|.||.|.||  .|||.|              
Sbjct   71  GGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTCT--------------  126

Query   75  TTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA  137
                        ||| |||           ||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  127  ------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA  187

Query  138  AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC  211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  188  AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC  261

Query  212  ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC  285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  262  ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC  335

Query  286  CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA  359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  336  CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA  409

Query  360  TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA  433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  410  TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA  483

Query  434  AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT  507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  484  AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT  557

Query  508  AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG  581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  558  AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG  631

Query  582  GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA  655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  632  GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA  705

Query  656  GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA  729
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  706  GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA  779

Query  730  AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA  803
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  780  AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA  853

Query  804  GGAAGCTTTAGCTAGAAG--------------------------------------------------------  821
            ||||||||||||||||||                                                        
Sbjct  854  GGAAGCTTTAGCTAGAAGAGAAGACGGGGTCTCCCTATGTTGCCCAGGCTGGTAACACAGTGTAACCTGATGTG  927

Query  822  ----------------------------------------------------GTTGGAAAGGGCAAAGAAATTA  843
                                                                ||||||||||||||||||||||
Sbjct  928  CTTCCCTGGGAACCCAGCCTGACAGAAACTGCAGCTGAACAGCAGCAAAAGTGTTGGAAAGGGCAAAGAAATTA  1001

Query  844  CAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGG  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002  CAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGG  1075

Query  918  TTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGA  991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076  TTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGA  1149

Query  992  TGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTT  1065
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150  TGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTT  1223

Query 1066  AATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATC  1139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224  AATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATC  1297

Query 1140  CCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGG  1213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298  CCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGG  1371

Query 1214  GTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAA  1287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372  GTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAA  1445

Query 1288  GAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTT  1361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446  GAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTT  1519

Query 1362  GGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT-------------------------------------  1398
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct 1520  GGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAG  1593

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1594  ACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACT  1667

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1668  TTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTA  1741

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1742  AACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAAT  1815

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1816  ATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTA  1889

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1890  CTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTG  1963

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1964  GCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTG  2037

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2038  TTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGA  2111

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2112  AAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGT  2185

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2186  GAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTG  2259

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2260  GTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTT  2333

Query 1399  ---------------------------  1398
                                       
Sbjct 2334  TTATTTTAATAAAGTGCCTTATAACAA  2360

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