Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- XR_001748847.2
- Aligned Length:
- 2412
- Identities:
- 1347
- Gaps:
- 1049
Alignment
Query 1 -----------------------------------------------------------ATGATTTTATTTTGA 15
| ||||.|.|||
Sbjct 1 AGCTGTGCGACGCGCCGGGCCTCCTCGCCTTTGTGCCATCCGGGTCTCTCGCGCGAGCGA----TTTAGTCTGA 70
Query 16 ----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC 74
|.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.|
Sbjct 71 GGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTCT-------------- 126
Query 75 TTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 137
||| ||| ||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 127 ------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 187
Query 138 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 261
Query 212 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 335
Query 286 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 409
Query 360 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 483
Query 434 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 557
Query 508 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 631
Query 582 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 705
Query 656 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 779
Query 730 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 803
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 780 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 853
Query 804 GGAAGCTTTAGCTAGAAG-------------------------------------------------------- 821
||||||||||||||||||
Sbjct 854 GGAAGCTTTAGCTAGAAGACAAAATACCTGAAACAAGAAGACGGGGTCTCCCTATGTTGCCCAGGCTGGTAACA 927
Query 822 ---------------------------------------------------------------------GTTGG 826
|||||
Sbjct 928 CAGTGTAACCTGATGTGCTTCCCTGGGAACCCAGCCTGACAGAAACTGCAGCTGAACAGCAGCAAAAGTGTTGG 1001
Query 827 AAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 AAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCA 1075
Query 901 GCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGAT 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGAT 1149
Query 975 AGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACT 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 AGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACT 1223
Query 1049 ATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAG 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 ATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAG 1297
Query 1123 AAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAA 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 AAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAA 1371
Query 1197 ATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGA 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 ATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGA 1445
Query 1271 CTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 CTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACA 1519
Query 1345 CAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT-------------------- 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 CAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTA 1593
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1594 AAGTTTGGGACTTATAGACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCA 1667
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1668 TGGGTGTTGCATTGACTTTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTA 1741
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1742 GTGTTGTAATCAGGTTAAACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATG 1815
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1816 AATTCTACTTTTCAAATATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTG 1889
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1890 TCTTGTGTACTTTTGTACTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGAT 1963
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1964 GTTCTTTAGAAGATCTGGCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGG 2037
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2038 TTTTCTCAAAACTGGTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATT 2111
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2112 TGGCAATTGCTGTTAGAAAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACT 2185
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2186 ACAGTCAATACCGTGGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTAT 2259
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2260 TATAAGGGACAGACTTGGTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTA 2333
Query 1399 -------------------------------------------- 1398
Sbjct 2334 AAGGGATGTAAGCACTTTTATTTTAATAAAGTGCCTTATAACAA 2377
