Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- XR_001748848.2
- Aligned Length:
- 2304
- Identities:
- 1347
- Gaps:
- 941
Alignment
Query 1 -----------------------------------------------------------ATGATTTTATTTTGA 15
| ||||.|.|||
Sbjct 1 AGCTGTGCGACGCGCCGGGCCTCCTCGCCTTTGTGCCATCCGGGTCTCTCGCGCGAGCGA----TTTAGTCTGA 70
Query 16 ----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC 74
|.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.|
Sbjct 71 GGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTCT-------------- 126
Query 75 TTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 137
||| ||| ||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 127 ------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 187
Query 138 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 261
Query 212 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 335
Query 286 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 409
Query 360 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 483
Query 434 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 557
Query 508 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 631
Query 582 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 705
Query 656 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 779
Query 730 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 803
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 780 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 853
Query 804 GGAAGCTTTAGCTAGAAG-----------------GTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAA 860
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 854 GGAAGCTTTAGCTAGAAGACAAAATACCTGAAACAGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAA 927
Query 861 GGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTG 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 GGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTG 1001
Query 935 CTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCT 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 CTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCT 1075
Query 1009 AAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGC 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGC 1149
Query 1083 TGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATAT 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 TGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATAT 1223
Query 1157 GGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGAT 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 GGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGAT 1297
Query 1231 GAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTT 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 GAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTT 1371
Query 1305 AGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 AGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAA 1445
Query 1379 TGCGAGGAATGGATGCAGTT------------------------------------------------------ 1398
||||||||||||||||||||
Sbjct 1446 TGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCTGATGT 1519
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1520 CACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACTTTAATTTATTGAAAAAT 1593
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1594 ACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCATTAAA 1667
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1668 CTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAATATATAAAAGCTGCAGGT 1741
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1742 GGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTACAGTT 1815
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1816 ATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTGGCCATTTGGTACATAAT 1889
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1890 CCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTTACCTG 1963
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1964 GGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGAAAACACTAGCTAGAAAT 2037
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2038 CCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGTGAGCAAAAATGTAAAAG 2111
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2112 GTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTGGTATTCAGTATTTGTCA 2185
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2186 AATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTTTTATTTTAATAAAGTGC 2259
Query 1399 ---------- 1398
Sbjct 2260 CTTATAACAA 2269
