Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- XR_002957370.1
- Aligned Length:
- 2307
- Identities:
- 1347
- Gaps:
- 944
Alignment
Query 1 -----------------------------------------------------------ATGATTTTATTTTGA 15
| ||||.|.|||
Sbjct 1 AGCTGTGCGACGCGCCGGGCCTCCTCGCCTTTGTGCCATCCGGGTCTCTCGCGCGAGCGA----TTTAGTCTGA 70
Query 16 ----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC 74
|.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.|
Sbjct 71 GGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTCT-------------- 126
Query 75 TTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 137
||| ||| ||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 127 ------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGA 187
Query 138 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 AAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATC 261
Query 212 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGC 335
Query 286 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 CGGAGCAGAAGCAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACA 409
Query 360 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACA 483
Query 434 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 AACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGT 557
Query 508 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 AGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAG 631
Query 582 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 GAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACA 705
Query 656 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 706 GGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGA 779
Query 730 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 803
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 780 AGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACA 853
Query 804 GGAAGCTTTAGCTAGAAG-----------------GTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAA 860
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 854 GGAAGCTTTAGCTAGAAGACAAAATACCTGAAACAGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAA 927
Query 861 GGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCT---GCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATG 931
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 928 GGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATG 1001
Query 932 TTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAA 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 TTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAA 1075
Query 1006 GCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATT 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATT 1149
Query 1080 TGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAA 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 TGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAA 1223
Query 1154 TATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAA 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 TATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAA 1297
Query 1228 GATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAA 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 GATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAA 1371
Query 1302 TTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTT 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 TTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTT 1445
Query 1376 CAATGCGAGGAATGGATGCAGTT--------------------------------------------------- 1398
|||||||||||||||||||||||
Sbjct 1446 CAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCTGA 1519
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1520 TGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACTTTAATTTATTGAAA 1593
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1594 AATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCATT 1667
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1668 AAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAATATATAAAAGCTGCA 1741
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1742 GGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTACA 1815
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1816 GTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTGGCCATTTGGTACAT 1889
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1890 AATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTTAC 1963
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1964 CTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGAAAACACTAGCTAGA 2037
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2038 AATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGTGAGCAAAAATGTAA 2111
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2112 AAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTGGTATTCAGTATTTG 2185
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2186 TCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTTTTATTTTAATAAAG 2259
Query 1399 ------------- 1398
Sbjct 2260 TGCCTTATAACAA 2272
