Nucleotide Global Alignment
Description
- Query:
- TRCN0000489560
- Subject:
- NM_001080448.3
- Aligned Length:
- 3404
- Identities:
- 970
- Gaps:
- 2416
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAATTCCCCTCGCCTCCAGCCGCGAGGAGCTCCCCGGCGCCGCAGGCAGCGTCCTCCTCCGAAGCAGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGCAACTGGGCAGCCTGGACCCTCGTGCCCTGTTCCCGGGACCTCGCGCAGGGGGCGCCCCGGGACACCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCGGGCCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGACGTGGACAAGGACCCCCATCCTACCCAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCTGCCTGCGCTGCCGCCACTTCTCTTTAAGGGAGAGGAAAAGAGAGCCTAGGAGAACCATGGGGGGCTGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCTCTGCTGACAGCGTGGCCAGGCGACTGCAGTCACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCCAACAACCAAGTTGTGTTGCTTGATACAACAACTGTACTGGGAGAGCTAGGATGGAAAACATATCCATTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGGTGGGATGCCATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACCAAACCAAAACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAATTCACACTAAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATATGGAATCAGATGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGAGAGTTTTACCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATAGAAAGGAAAGGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTACAAGAAATGCCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTTTGGTTGAAGTACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGATGGAGATTGGCTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTC 1702
Query 1 ---------------------AT--GAAAG------------------ACTC-TCCATTTCAAGTGACAAA--- 29
|| ||||| |||| |||| ||||...||||
Sbjct 1703 TGGACTACGAGATCAAGTACTATGAGAAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCC 1773
Query 30 ---ACTGT-------ACTGG-CTTAA--------------------------------TGAAAAGTGGGAC--- 57
|.||| ||.|| ||||| |||.||.||.|||
Sbjct 1774 CCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGG 1847
Query 58 -TTTATTGCCT-CAG--------------------------------CTTCTGACATGGCAGCAGAACAAGGAC 97
|..|.||.|| ||| |||||||||||||||||||||||||||
Sbjct 1848 ATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGAC 1921
Query 98 AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC 1995
Query 172 ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG 2069
Query 246 GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG 2143
Query 320 AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC 2217
Query 394 TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT 2291
Query 468 GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC 2365
Query 542 TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA 2439
Query 616 GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2440 GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG 2513
Query 690 CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC 2587
Query 764 ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2588 ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT 2661
Query 838 TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2662 TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG 2735
Query 912 TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACT----GACCTCTTCCAAACTCTAACA 981
||||||||||||||||||||||||||||||||||||||||||||||||| || |||.|| |.
Sbjct 2736 TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGA--------AAAATC---CC 2798
Query 982 CTTAA-------------------CCTCTGCT-------ATTCT-----GCA---------------------- 1002
|.||| |.||..|| ||||| |||
Sbjct 2799 CATAAGGTGGACAGCCCCAGAAGCCATCGCCTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCA 2872
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2873 TTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCC 2946
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 2947 ATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTG 3020
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 3021 GCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCA 3094
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 3095 GTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTG 3168
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 3169 TTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTT 3242
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 3243 TACAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACC 3316
Query 1003 -------------------------------------------------------------------------- 1002
Sbjct 3317 AGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA 3390
