Nucleotide Global Alignment
Description
- Query:
- TRCN0000489564
- Subject:
- XR_946573.2
- Aligned Length:
- 4059
- Identities:
- 2117
- Gaps:
- 1941
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGTCCCTGTATCCAGCTCACCCCCAGGGACCACTGGGCACCTGGTCCATCACATTTTCCTGATGTTTCTAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGCCCCTCCTGCATCCCTGTTCGTCTGATAAACTTGCCTTTAAACGTGTATATGAAGGACTCTTCCTCTGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCTAATCCTAACAGGTGCTAGATCCCACAGAGCCCTGTCCAGCTGGGGACTATGCTGACCTCTCTCCCAGATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATATCCCTCTCCTCGGGGCTCAGCCTGGCCAGTGCCTGATGTTCTGGGATAGGAGAACTGGGGAGAGAAGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAGGACCCTGCCTCTCACTTTTCTTTCCACCAAAAGGGGAAAAAAGAGGATCTGGTCCTCACACCCAGCCTTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATACTTATAAGATGCTGGGGATAGGGTGTGGGACAGGGCCAGTGAGAGCTGGGGATGGGGTGTGGGACAGGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGTGAGATCTGTTTTCCTGCTGCTCCAGTCTGGGCCCTACAGCAGATGCATGCAGAGTAATATTTGTAAGACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAATATTCCAAATGCAGCTACTTTGGAAGGACCATGTGAGCAGATATCTAAGTGCGTGGCATCTGGGCCCCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCTAGATGGTGGTCGATGTTGGTTTCTTTGTGTTAACCCCAAGAACATTCAGTAGCTCAGGGTTTGCAGAGGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTCAGGAGCACATCTTAGCCTCATTGGTGGTGTGAGGCAGGCAGGGCACAGGTCACACTGATGAGGACACCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCCAGAGACATTTAGCAACCTGCCCAAGGGCATCTGTAGTTCAGTGAGAGGTGGAGCTGGGACTGAAATCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTGCCTGAGTCCCAGAGATGGTCTTCCCTGGACCCAGGGAGCACTGTATCTTTTTCAGGGAAGGCCTCCTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCACAACCATTTCATCTGTCACAGTACAGAATAGGAAGTATGGGTCAGGCATCAGAAGATGTGAATTCTGGCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCTTTTCAGAGATGGCCCTGCCTAGTTCCTTGGAATAAATGATGATGTCTTCCCCAGCCTCAGTTTCCTACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATATAAAAAGAGAAAGCAACATCTAGGTAGGTTGGAATGGGAGTACATGAGGTGGTGGCCACTTTGCTAGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACAGTAGACTCCTCACCTCCTTCCCCTTGTCTTCCTCTCACTAGGTAAAAGACAATTGTATTGAACTCTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAAATTGGACTCCAGTCCCGGCTCCACCTTTACTTCCCTGGGCCTTGGTTTTCCCACCACACAGGAGTTTGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACTTTGATTTCTGAAGTCCTTCCCACCTCTGGGGTTCCAATATTCTGCTCCTTTTCTCCTCTTCCTCCTCCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCCTTTCTCCTCCTGCTCATCTGGGGTTAGGGAGATTGCGTGTATGTGTGTGCCTGTGTGTACACATGCATGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTGTGTGCACGTAGTGGCAGCAAGGAAGAGGAAGGAAGGAGTCCTGCAGGGGTTGGTGGTGGCAGTTGGGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAAGGAGGCAGGACTGTATGTGCCAGCAGGGCTCAGAGTTTTCTCACCAACTAATGGTGCTTGGGGCAGTTTA 1554
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 1555 ATCATTAAAGGAAAGGAATGAAGCCAGGAGCGCCTCAAAGTCCAGCCTGCTGTTGACCAACACTAACAGATGAG 1628
Query 6 CAAGGAGCTGGCAGCAATGGGGCCTGGAGCTTCAGGGGACGGGGTCAGGACTGAGACAGCTCCACACATAGCAC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAAGGAGCTGGCAGCAATGGGGCCTGGAGCTTCAGGGGACGGGGTCAGGACTGAGACAGCTCCACACATAGCAC 1702
Query 80 TGGACTCCAGAGTTGGTCTGCACGCCTACGACATCAGCGTGGTGGTCATCTACTTTGTCTTCGTCATTGCTGTG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGGACTCCAGAGTTGGTCTGCACGCCTACGACATCAGCGTGGTGGTCATCTACTTTGTCTTCGTCATTGCTGTG 1776
Query 154 GGGATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCCTGGCCGGGAGGTCCATGAGCTG 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGGATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCCTGGCCGGGAGGTCCATGAGCTG 1850
Query 228 GTGGCCAATTGGAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGACAGGGG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTGGCCAATTGGAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGACAGGGG 1924
Query 302 CTGCCGGAGGCCTTGCCGTAGGTGGCTTCGAGTGGAACATGAGGAAATCAAGGTCTGGAGGAGACAGAGGGATC 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGCCGGAGGCCTTGCCGTAGGTGGCTTCGAGTGGAACATGAGGAAATCAAGGTCTGGAGGAGACAGAGGGATC 1998
Query 376 CATCCAAGGTCACACGGGAGGACTGGGGTCAGG----------------------------------------- 408
|||||||||||||||||||||||||||||||||
Sbjct 1999 CATCCAAGGTCACACGGGAGGACTGGGGTCAGGTCCCAGGTCTCTTATTTCTCTGTTCGGGGGCCTCCCACAGC 2072
Query 409 -------------------------------------------------------------------------- 408
Sbjct 2073 ACAGCACTGCCTCTGGGTGGGAAGCCGCCCCTCTGTCTACATCCAGGACCTGGATACCTTCTTCTTCTCCCCAC 2146
Query 409 --TCCCAGGCAACCTGGCTGCTCCTGGCCCTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCTCCCAGGCAACCTGGCTGCTCCTGGCCCTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTC 2220
Query 481 ACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGCCAGAGGATCCAGGTGTACATGTCTGTCCTGTCTCTCAT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGCCAGAGGATCCAGGTGTACATGTCTGTCCTGTCTCTCAT 2294
Query 555 CCTCTACATCTTCACCAAGATCTCGACTGACATCTTCTCTGGAGCCCTCTTCATCCAGATGGCATTGGGCTGGA 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCTCTACATCTTCACCAAGATCTCGACTGACATCTTCTCTGGAGCCCTCTTCATCCAGATGGCATTGGGCTGGA 2368
Query 629 ACCTGTACCTCTCCACAGGGATCCTGCTGGTGGTGACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCCGTG 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACCTGTACCTCTCCACAGGGATCCTGCTGGTGGTGACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCCGTG 2442
Query 703 ATCTACACAGATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCCTGGTCCTCATGTTTCTGGGCTTTCAGGA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ATCTACACAGATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCCTGGTCCTCATGTTTCTGGGCTTTCAGGA 2516
Query 777 CGTGGGCTGGTACCCAGGCCTGGAGCAGCGGTACAGGCAGGCCATCCCTAATGTCACAGTCCCCAACACCACCT 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CGTGGGCTGGTACCCAGGCCTGGAGCAGCGGTACAGGCAGGCCATCCCTAATGTCACAGTCCCCAACACCACCT 2590
Query 851 GTCACCTCCCACGGCCCGATGCTTTCCACATGCTTCGGGACCCTGTGAGCGGGGACATCCCTTGGCCAGGTCTC 924
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTCACCTCCCACGGCCCGATGCTTTCCACATTCTTCGGGACCCTGTGAGCGGGGACATCCCTTGGCCAGGTCTC 2664
Query 925 ATTTTCGGGCTCACAGTGCTGGCCACCTGGTGTTGGTGCACAGACCAGGTCATTGTGCAGCGGTCTCTCTCGGC 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATTTTCGGGCTCACAGTGCTGGCCACCTGGTGTTGGTGCACAGACCAGGTCATTGTGCAGCGGTCTCTCTCGGC 2738
Query 999 CAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGCTGGGGGGCTACCTGAAGATCCTCCCCATGTTCTTCATCG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGCTGGGGGGCTACCTGAAGATCCTCCCCATGTTCTTCATCG 2812
Query 1073 TCATGCCTGGCATGATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGCGTGGACCCTGATGTCTGCCAAAGA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TCATGCCTGGCATGATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGCGTGGACCCTGATGTCTGCCAAAGA 2886
Query 1147 ATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCT 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCT 2960
Query 1221 GCGGGGGCTGATGATTGCCGTGATCATGGCCGCTCTCATGAGCTCACTCACCTCCATCTTCAACAGCAGCAGCA 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCGGGGGCTGATGATTGCCGTGATCATGGCCGCTCTCATGAGCTCACTCACCTCCATCTTCAACAGCAGCAGCA 3034
Query 1295 CCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAG- 1367
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGG 3108
Query 1368 -------------------------------------------------------------------------- 1367
Sbjct 3109 TGCGCCGGCCCCTCCTTCCCTCCTTCCGAAGTGCCCTCTCCCCTCTGCCCTGCCCTGGGTTACCCTGAACAGAG 3182
Query 1368 -----------------------------------------------------------------------AGT 1370
|||
Sbjct 3183 GTGGCTGGGTTGGACCCTGGACTGGCAGCCAGAGCACCGGGTTCAAGCTCCAGCTCTCCACATGATTTCAAAGT 3256
Query 1371 GTTTGTGGTGTTCCTGGTTGTCATCAGCATCCTCTGGATCCCCATCATCCAAAGCTCCAACAGTGGGCAGCTCT 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GTTTGTGGTGTTCCTGGTTGTCATCAGCATCCTCTGGATCCCCATCATCCAAAGCTCCAACAGTGGGCAGCTCT 3330
Query 1445 TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCCCACCCATCACCGCTCTCTTCCTGCTGGCCATCTTCTGC 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCCCACCCATCACCGCTCTCTTCCTGCTGGCCATCTTCTGC 3404
Query 1519 AAGAGGGTCACAGAGCCCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGTATGATCCT 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AAGAGGGTCACAGAGCCCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGTATGATCCT 3478
Query 1593 GGAGTTCTCATACCCAGCGCCAGCCTGTGGGGAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTCCACTACC 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GGAGTTCTCATACCCAGCGCCAGCCTGTGGGGAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTCCACTACC 3552
Query 1667 TGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATC 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATC 3626
Query 1741 CCTGAGGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCCCA 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CCTGAGGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCCCA 3700
Query 1815 CGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGA 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGA 3774
Query 1889 GCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGTTGCTCTGGAGCTGGTTCTGTGGGCTC 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGTTGCTCTGGAGCTGGTTCTGTGGGCTC 3848
Query 1963 TCTGGAACACCGGAGCAGGCCCTGAGCCCAGCAGAGAAGGCTGCGCTAGAACAGAAGCTGACAAGCATTGAGGA 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TCTGGAACACCGGAGCAGGCCCTGAGCCCAGCAGAGAAGGCTGCGCTAGAACAGAAGCTGACAAGCATTGAGGA 3922
Query 2037 GGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGGGCT 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 GGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGGGCT 3996
Query 2111 ATTTTGCG------------------------------------------------------- 2118
||||||||
Sbjct 3997 ATTTTGCGTGATTCCACAGACCTGGCTTCAGTGTAGACAGATTAAACAAAGCCCAAGCCTGTC 4059
