Nucleotide Global Alignment
Description
- Query:
- TRCN0000489576
- Subject:
- NR_004843.2
- Aligned Length:
- 4551
- Identities:
- 1011
- Gaps:
- 3370
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTCCTTGGTTCCGGACACAGTCCACGCAGTAACTTGTTTTTGCAGAGACTGATAGGCGGATCGGGCGTGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGCGCGCCCCACTCAGGGAAAGCTGCCGTCCCTCTTTGCCTTTGAGCGCCGCAGCCCTGAGAATCGCATCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTTGGAAACGGTCCCAGGACTGGAGCCACCAAGAAAGCCGAAGGCAGTCGCGAAGAGCCGAGGACGCCCAGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTCTGCGGCTTCCGGGAAGCGGAACCGAGCCTACCCGGAAGGAGCCAACCTCACCTGAGGCTCGCTGAGCACC 296
Query 1 -------------------------------ATGGCGGCCGAGGCGACAGCTGTGGCCGGAAGCGGGGCTGTTG 43
||||||||.||.|.|||||..||.|.||||.|.||||||||.|
Sbjct 297 GGCAGGCGTTAAACCTAACGGAGCCCACGTCATGGCGGCAGACGGGACAGGGGTAGTCGGAGGAGGGGCTGTCG 370
Query 44 GCGGCTGCCTGGCCAAAGACGGCTTGCAGCAGTCTAAGTGCCCGGACACTACCCCAAAACGGCGGCGCGCCTCG 117
|||||.|||||.||||.|||||.||||||.|..||||||||||.||..|.|.|||.||.|||||||||||.||.
Sbjct 371 GCGGCGGCCTGCCCAAGGACGGTTTGCAGGATGCTAAGTGCCCAGAGCCAATCCCCAATCGGCGGCGCGCTTCC 444
Query 118 TCGCTGTCGCGTGACGCCGAGCGCCGAGCCTACCAATGGTGCCGGGAGTACTTGGGCGGGGCCTGGCGCCGAGT 191
||||||||.||||||||..|||||||||||||.||.|||||||||||||||.|||||||||||||||||||||.
Sbjct 445 TCGCTGTCCCGTGACGCGCAGCGCCGAGCCTATCAGTGGTGCCGGGAGTACCTGGGCGGGGCCTGGCGCCGAGC 518
Query 192 GCAGCCCGAGGAGCTGAGGGTTTACCCCGTGAGCGGAGGCCTCAGCAACCTGCTCTTCCGCTGCTCGCTCCCGG 265
||.|||.|||||||||||.||||..|||||||||||||||||||||||||||||||||||.|||||.||.|||.
Sbjct 519 GCGGCCGGAGGAGCTGAGCGTTTGTCCCGTGAGCGGAGGCCTCAGCAACCTGCTCTTCCGATGCTCACTACCGA 592
Query 266 ACCACCTGCCCAGCGTTGGCGAGGAGCCCCGGGAGGTGCTTCTGCGGCTGTACGGAGCCATCTTGCAGGGCGTG 339
|||||.|.|||||.||.||||.||||||||||||||||||.||.||.||.|||||.||||||.|||||||.||.
Sbjct 593 ACCACGTACCCAGTGTGGGCGGGGAGCCCCGGGAGGTGCTGCTACGACTCTACGGGGCCATCCTGCAGGGTGTA 666
Query 340 GACTCCCTGGTGCTAGAAAGCGTGATGTTCGCCATACTTGCGGAGCGGTCGCTGGGGCCCCAGCTGTACGGAGT 413
||||||.||||..||||||||||||||||||||||.||.||.||||||||.||.|||||||||||.||||||||
Sbjct 667 GACTCCTTGGTATTAGAAAGCGTGATGTTCGCCATTCTCGCAGAGCGGTCTCTAGGGCCCCAGCTTTACGGAGT 740
Query 414 CTTCCCAGAGGGCCGGCTGGAACAGTACATCCCA---------------------------------------- 447
.||.|||||||||||..|||||||||||.|||||
Sbjct 741 GTTTCCAGAGGGCCGCTTGGAACAGTACCTCCCAGTAAGAGCCCAGTTTTTGTTGTTTTTACCCCAAGTCTTTA 814
Query 448 -------------------------------------------------------------------------- 447
Sbjct 815 CCCTTCCCAAAGTCTGCCTTCACATCCCAGGTAGGGAAATTTCCCTAAGACCTTGATCTCCTCCCATCCCGTAT 888
Query 448 -------------------------------------------------------AGTCGGCCATTGAAAACTC 466
||.|||||.||||||||||
Sbjct 889 CCCTTCCCCCTCCCGCCCCAGCCCCCTCACCACCCTGATAGGTTACTGGGTACAGAGCCGGCCGTTGAAAACTC 962
Query 467 AAGAGCTTCGAGAGCCAGTGTTGTCAGCAGCCATTGCCACGAAGATGGCGCAATTTCATGGCATGGAGATGCCT 540
|||||||.||.||.|||||||||||.|.|||||||||.||||.||||||.|..||.|||||.|||||||||||.
Sbjct 963 AAGAGCTCCGGGACCCAGTGTTGTCGGGAGCCATTGCAACGAGGATGGCCCGTTTCCATGGTATGGAGATGCCC 1036
Query 541 TTCACCAAGGAGCCCCACTGGCTGTTTGGGACCATGGAGCGGTACCTAAAACAGATCCAGGACCTGCCCCCAAC 614
|||||.||||||||||..|||.|||||||||||||||||||||||||.||.||||||||||||.||||..|.||
Sbjct 1037 TTCACTAAGGAGCCCCGATGGTTGTTTGGGACCATGGAGCGGTACCTGAAGCAGATCCAGGACTTGCCTTCCAC 1110
Query 615 TGGCCTCCCTGAGATGAACCTGCTGGAGATGTACAGCCTGAAGGATGAGATGGGCAACCTCAGGAAGTTACTAG 688
..||||.||..|||||||||||.|.||||||||||||||.|||||.||||||..||.|||||||||||||||||
Sbjct 1111 CAGCCTTCCCCAGATGAACCTGGTAGAGATGTACAGCCTCAAGGACGAGATGAACAGCCTCAGGAAGTTACTAG 1184
Query 689 AGTCTACCCCATCGCCAGTCGTCTTCTGCCACAATGACATCCAGGAAGGGAACATCTTGCTGCTCTCAGAGCCA 762
|...||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||.||||.|||||||||
Sbjct 1185 ACGATACCCCGTCACCAGTGGTCTTCTGCCACAATGACATCCAGGAAGGAAACATCTTGTTGCTTTCAGAGCCA 1258
Query 763 GAAAATGCTGACAGCCTCATGCTGGTGGACTTCGAGTACAGCAGTTATAACTATAGGGGCTTTGACATTGGGAA 836
||.|.||.|||.|.|||||||.||||.||.||.||||||||.|||||||||||.||||||||||||||||||||
Sbjct 1259 GACAGTGATGATAACCTCATGTTGGTTGATTTTGAGTACAGTAGTTATAACTACAGGGGCTTTGACATTGGGAA 1332
Query 837 CCATTTTTGTGAGTGGGTTTATGATTATACTCACGAGGAATGGCCTTTCTACAAAGCAAGGCCCACAGACTACC 910
.||||||||||||||||||||||||||||||.|.||.|||||||||||||||||||||||.|||||.|||||||
Sbjct 1333 TCATTTTTGTGAGTGGGTTTATGATTATACTTATGAAGAATGGCCTTTCTACAAAGCAAGACCCACGGACTACC 1406
Query 911 CCACTCAAGAACAGCAGTTGCATTTTATTCGTCATTACCTGGCAGAGGCAAAGAAAGGTGAGACCCTCTCCCAA 984
|||||..||||||||||.|.|||||||||||.|||||.||||||||||...||||.|||||||.|||||||.||
Sbjct 1407 CCACTAGAGAACAGCAGCTCCATTTTATTCGCCATTATCTGGCAGAGGTTCAGAAGGGTGAGATCCTCTCCGAA 1480
Query 985 GAGGAGCAGAGAAAACTGGAAGAAGATTTGCTGGTAGAAGTCAGTCGGTATGCTCTGGCATCCCATTTCTTCTG 1058
|||||.||||..||||.|||||||||.||||||.||||..||||||||||..|.||||||||.||.||.|||||
Sbjct 1481 GAGGAACAGAAGAAACGGGAAGAAGAATTGCTGCTAGAGATCAGTCGGTACTCCCTGGCATCTCACTTTTTCTG 1554
Query 1059 GGGTCTGTGGTCCATCCTCCAGGCATCCATGTCCACCATAGAATTTGGTTACTTGGACTATGCCCAGTCTCGGT 1132
||||||||||||||.|||.|||||.||.||||||||.|||||.||.||.||||||||.||||||||.|||||||
Sbjct 1555 GGGTCTGTGGTCCACCCTGCAGGCTTCGATGTCCACTATAGAGTTCGGCTACTTGGAGTATGCCCAATCTCGGT 1628
Query 1133 TCCAGTTCTACTTCCAGCAGAAGGGGCAGCTGACCAGTGTCCACTCC-TCATCC-------------------- 1185
|||||||||||||||||||||||||.||||||||.||| ||| || ||||||
Sbjct 1629 TCCAGTTCTACTTCCAGCAGAAGGGCCAGCTGACGAGT-TCC---CCATCATCCTGAGGATCCAACCCCACCTC 1698
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1699 AAGTTTCTCCTGGAGCCTCCGGGGCAGGACCTTGGAGGGAGGGGCAGAGAGCAGACGACCCCCAGAGACGGGGC 1772
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1773 TGTGCCTCAAAGTGCTGAATAAACCCCAGGATGGCGGAAGCACACCAGGCAGTAGCTTTCCAGTTCACTGTGAC 1846
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1847 CCCAGACGGGGTCGACTTCCGGCTTAGTCGGGAGGCTCTGAGACACATCTACCTGTCTGGAATCAACTCCTGGA 1920
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1921 AGAAACGCCTTATTCGAATCAAGAATGGCATCCTTAGGGGTGTGTACCCTGGCAGCCCCACCAGCTGGCTGGTT 1994
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1995 GTTGTCATGGCAACAGTTGGTTCCAACTACTGCAAGGTGGACATCTCCATGGGACTGGTCGATTGCATCCAGAG 2068
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2069 ATGCCTCCCGGAAAGGTATGGCCACTTTGGGACCCCACAGACAGAGGCACTTCTCAGCATGGTCATCTTCTCCA 2142
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2143 CCGGAGTCTGGGCGACAGGCATTTTCTTCTTCCGACAAACCCTGAAGCTGCTGCTCTCCTACCACGGGTGGATG 2216
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2217 TTCGAGATGCACAGCAAGACCAGCCATGCCACCAAGATCTGGGCTATCTGTGTCCGTCTCCTGTCCAGCCGGCG 2290
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2291 GCCCATGCTCTACAGCTTCCAAACGTCACTGCCTAAGCTTCCTGTCCCCAGCGTGCCAGCCACAATTCACCGGT 2364
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2365 ACTTGGATTCTGTGCGGCCCTTATTGGATGATGAAGCATATTACCGCATGGAGACATTGGCCAAGGAATTCCAG 2438
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2439 GACAAGACTGCCCCCAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAACTAACTATGTGAGTGACTG 2512
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2513 GTGGGAAGAATATGTCTACCTCCGAAGCAGGAGCCCCCTCATGGTGAACAGCAACTATTATGCCATGGATTTTG 2586
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2587 TGCTTATTAAGAACACAAATGTGCAAGCAGCCCGTCTAGGCAATGCCGTTCACGCCATGATCATGTATCGCCGC 2660
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2661 AAACTGGACCGTGAAGAGATCAAGCCGACTTGCTACAGCACCTCTCAGAGAGCAGGCACGTGGCTGTCTACCAC 2734
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2735 AAAGGTCGCTTCTTCAAGGTCTGGCTCTATGAGGGCTCGCGCCTGCTCAAGCCCCGAGACCTGGAGATGCAGTT 2808
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2809 CCAGAGAATCCTCGACGACCCTTCCCCACCTCAGCCTGGGGAGGAGAAGCTGGCAGCCCTCACCGCAGGAGGAA 2882
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2883 GGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACAAGATGTCTCTGGACGCCATCGAA 2956
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2957 CGTGCTGCTTTCTTTGTGACCCTGGATGAAGATTCTCATTGCTACAACCCTGACGATGAGACCAGTCTTAGCCT 3030
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3031 CTACGGCAAAGCCTTGCTCCATGGCAACTGCTATAACAGGTGGTTTGACAAATCTTTCACCCTTATCTCCTGCA 3104
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3105 AGAATGGCCTGTTAGGCCTCAACACCGAACACTCGTGGGCAGACGCGCCCATCATTGGGCACCTCTGGGAGTTT 3178
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3179 GTCCTGGGCACTGATACCTTTCACCTGGGCTACACGGAGACAGGACACTGTGTGGGTGAGCCAAACACCACGTT 3252
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3253 GCCACCCCCTCAGCGGCTGCCGTGGGACATTCCCGAGCAGTGCCGGGAAGCCATCGAGAACTCGTACCAAGTAG 3326
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3327 CCAAGGCACTGGCCGATGACGTGGAGCTCTACTGCTTCCAGTTCTTACCCTTTGGCAAAGGTCTTATCAAGAAG 3400
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3401 TGTAGGACCAGCCCCGACGCTTTTGTGCAGATTGCCCTACAGCTGGCTCATTTCCGGGACAAAGGCAAGTTCTG 3474
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3475 CCTGACTTACGAGGCCTCGATGACAAGAATGTTCCGAGAGGGGCGGACTGAGACTGTGCGTTCCTGTACCAACG 3548
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3549 AGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGACCTCCAAGATCTCTTCCGGAAA 3622
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3623 GCCTCCGAAAAGCACCAAAACATGTACCGCCTAGCCATGACAGGGGCTGGGATCGACCGGCACCTCTTCTGCCT 3696
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3697 TTACATCGTCTCCAAGTACTTAGGAGTTAGCTCTCCTTTCCTGGCTGAGGTACTTTCTGAACCCTGGAGCCTCT 3770
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3771 CCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAACAGTATCCCAATCATCTGGGTGCTGGA 3844
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3845 GGTGGCTTTGGTCCCGTGGCGGATGATGGCTACGGGGTCTCTTACATGATCGCAGGAGAAAACACCATGTTCTT 3918
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3919 CCACATCTCCAGCAAATACTCAAGTTCAGAGACGAACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGT 3992
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3993 TGGACATCGCCGAACTTTTCAAAATTTCCAAGACAGACAGCTGAGGAAAAGAGATACCCCAGCTGCCCTCTGGT 4066
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4067 CCCCACCTGGTGGAAGAAGAGGCCTGTGGCCAGCTCACAGGCATAAGGGGTGGCGTGCACACACGCCCAGTTCG 4140
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4141 GAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCC 4214
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4215 CGCTGGAGGTGGGATTGGAGCAGCAGGGGAATTTTGATTTTTTTTTTTTTTTTTTGGCTTGGTAGATGTTAATA 4288
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4289 AAAATAAGGCTGTATAATTCTTACTTGGCTGTTAGGTGCCTATGTTTTTGTTAGAGAACGATAAGGCCCTTTCC 4362
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4363 TGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGAGAATGTTCATAATGGGCTTCTTACCTGCTTT 4436
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4437 GAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCGCTGTCCAACCTCTCATGTGCACTTGGAATAAAT 4510
Query 1186 ------------------------------------- 1185
Sbjct 4511 TCTTACTTTAGAACCTTAAAAAAAAAAAAAAAAAAAA 4547
