Nucleotide Global Alignment
Description
- Query:
- TRCN0000489576
- Subject:
- NR_027928.2
- Aligned Length:
- 4293
- Identities:
- 1185
- Gaps:
- 3108
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGATCTGCGGAATTCGGCCTTCGGAAAGAGCCCCCGGGCCGGGGCACGGAGAGAGCCGAGCGCCGCAGCCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCCGAATAGAGCCGGAGAGACCCGAGTATGACCGGAGAAGCCCAGGCCGGCCGGAAGAGGAGCCGAGCGCGG 148
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 149 CCGGAAGGAACCGAGCCCGTCCGAAGGGAGCGGAGCGCAGCCTGGCCTGGGGCCCGGTCGAGCCCGCGCCATGG 222
Query 5 CGGCCGAGGCGACAGCTGTGGCCGGAAGCGGGGCTGTTGGCGGCTGCCTGGCCAAAGACGGCTTGCAGCAGTCT 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGCCGAGGCGACAGCTGTGGCCGGAAGCGGGGCTGTTGGCGGCTGCCTGGCCAAAGACGGCTTGCAGCAGTCT 296
Query 79 AAGTGCCCGGACACTACCCCAAAACGGCGGCGCGCCTCGTCGCTGTCGCGTGACGCCGAGCGCCGAGCCTACCA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGTGCCCGGACACTACCCCAAAACGGCGGCGCGCCTCGTCGCTGTCGCGTGACGCCGAGCGCCGAGCCTACCA 370
Query 153 ATGGTGCCGGGAGTACTTGGGCGGGGCCTGGCGCCGAGTGCAGCCCGAGGAGCTGAGGGTTTACCCCGTGAGCG 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGTGCCGGGAGTACTTGGGCGGGGCCTGGCGCCGAGTGCAGCCCGAGGAGCTGAGGGTTTACCCCGTGAGCG 444
Query 227 GAGGCCTCAGCAACCTGCTCTTCCGCTGCTCGCTCCCGGACCACCTGCCCAGCGTTGGCGAGGAGCCCCGGGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGGCCTCAGCAACCTGCTCTTCCGCTGCTCGCTCCCGGACCACCTGCCCAGCGTTGGCGAGGAGCCCCGGGAG 518
Query 301 GTGCTTCTGCGGCTGTACGGAGCCATCTTGCAGGGCGTGGACTCCCTGGTGCTAGAAAGCGTGATGTTCGCCAT 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGCTTCTGCGGCTGTACGGAGCCATCTTGCAGGGCGTGGACTCCCTGGTGCTAGAAAGCGTGATGTTCGCCAT 592
Query 375 ACTTGCGGAGCGGTCGCTGGGGCCCCAGCTGTACGGAGTCTTCCCAGAGGGCCGGCTGGAACAGTACATCCCAA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTTGCGGAGCGGTCGCTGGGGCCCCAGCTGTACGGAGTCTTCCCAGAGGGCCGGCTGGAACAGTACATCCCAA 666
Query 449 GTCGGCCATTGAAAACTCAAGAGCTTCGAGAGCCAGTGTTGTCAGCAGCCATTGCCACGAAGATGGCGCAATTT 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTCGGCCATTGAAAACTCAAGAGCTTCGAGAGCCAGTGTTGTCAGCAGCCATTGCCACGAAGATGGCGCAATTT 740
Query 523 CATGGCATGGAGATGCCTTTCACCAAGGAGCCCCACTGGCTGTTTGGGACCATGGAGCGGTACCTAAAACAGAT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATGGCATGGAGATGCCTTTCACCAAGGAGCCCCACTGGCTGTTTGGGACCATGGAGCGGTACCTAAAACAGAT 814
Query 597 CCAGGACCTGCCCCCAACTGGCCTCCCTGAGATGAACCTGCTGGAGATGTACAGCCTGAAGGATGAGATGGGCA 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCAGGACCTGCCCCCAACTGGCCTCCCTGAGATGAACCTGCTGGAGATGTACAGCCTGAAGGATGAGATGGGCA 888
Query 671 ACCTCAGGAAGTTACTAGAGTCTACCCCATCGCCAGTCGTCTTCTGCCACAATGACATCCAGGAAGGGAACATC 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCTCAGGAAGTTACTAGAGTCTACCCCATCGCCAGTCGTCTTCTGCCACAATGACATCCAGGAAGGGAACATC 962
Query 745 TTGCTGCTCTCAGAGCCAGAAAATGCTGACAGCCTCATGCTGGTGGACTTCGAGTACAGCAGTTATAACTATAG 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTGCTGCTCTCAGAGCCAGAAAATGCTGACAGCCTCATGCTGGTGGACTTCGAGTACAGCAGTTATAACTATAG 1036
Query 819 GGGCTTTGACATTGGGAACCATTTTTGTGAGTGGGTTTATGATTATACTCACGAGGAATGGCCTTTCTACAAAG 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGGCTTTGACATTGGGAACCATTTTTGTGAGTGGGTTTATGATTATACTCACGAGGAATGGCCTTTCTACAAAG 1110
Query 893 CAAGGCCCACAGACTACCCCACTCAAGAACAGCAGTTGCATTTTATTCGTCATTACCTGGCAGAGGCAAAGAAA 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAAGGCCCACAGACTACCCCACTCAAGAACAGCAGTTGCATTTTATTCGTCATTACCTGGCAGAGGCAAAGAAA 1184
Query 967 GGTGAGACCCTCTCCCAAGAGGAGCAGAGAAAACTGGAAGAAGATTTGCTGGTAGAAGTCAGTCGGTATGCTCT 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGTGAGACCCTCTCCCAAGAGGAGCAGAGAAAACTGGAAGAAGATTTGCTGGTAGAAGTCAGTCGGTATGCTCT 1258
Query 1041 GGCATCCCATTTCTTCTGGGGTCTGTGGTCCATCCTCCAGGCATCCATGTCCACCATAGAATTTGGTTACTTGG 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCATCCCATTTCTTCTGGGGTCTGTGGTCCATCCTCCAGGCATCCATGTCCACCATAGAATTTGGTTACTTGG 1332
Query 1115 ACTATGCCCAGTCTCGGTTCCAGTTCTACTTCCAGCAGAAGGGGCAGCTGACCAGTGTCCACTCCTCATCC--- 1185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACTATGCCCAGTCTCGGTTCCAGTTCTACTTCCAGCAGAAGGGGCAGCTGACCAGTGTCCACTCCTCATCCTGA 1406
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1407 CTCCACCCTCCCACTCCTTGGATTTCTCCTGGAGCCTCCAGGGCAGGACCTTGGAGGGAGGAACAACGAGCAGA 1480
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1481 AGGCCCTGGCGACTGGGCTGAGCCCCCAAGTGAAACTGAGGTTCAGGAGACCGGCCTGTTCCTGAGTTTGAGTG 1554
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1555 CCGACCAACCCCCAGGATGGCGGAAGCTCACCAGGCCGTGGCCTTCCAGTTCACGGTGACCCCAGACGGGGTCG 1628
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1629 ACTTCCGGCTCAGTCGGGAGGCCCTGAAACACGTCTACCTGTCTGGGATCAACTCCTGGAAGAAACGCCTGATC 1702
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1703 CGCATCAAGAATGGCATCCTCAGGGGCGTGTACCCTGGCAGCCCCACCAGCTGGCTGGTCGTCATCATGGCAAC 1776
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1777 AGTGGGTTCCTCCTTCTGCAACGTGGACATCTCCTTGGGGCTGGTCAGTTGCATCCAGAGATGCCTCCCTCAGG 1850
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1851 GGTGTGGCCCCTACCAGACCCCGCAGACCCGGGCACTTCTCAGCATGGCCATCTTCTCCACGGGCGTCTGGGTG 1924
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1925 ACGGGCATCTTCTTCTTCCGCCAAACCCTGAAGCTGCTTCTCTGCTACCATGGGTGGATGTTTGAGATGCATGG 1998
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1999 CAAGACCAGCAACTTGACCAGGATCTGGGCTATGTGTATCCGCCTTCTATCCAGCCGGCACCCTATGCTCTACA 2072
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2073 GCTTCCAGACATCTCTGCCCAAGCTTCCTGTGCCCAGGGTGTCAGCCACAATTCAGCGGTACCTAGAGTCTGTG 2146
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2147 CGCCCCTTGTTGGATGATGAGGAATATTACCGCATGGAGTTGCTGGCCAAAGAATTCCAGGACAAGACTGCCCC 2220
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2221 CAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAAGTAACTATGTGAGTGACTGGTGGGAAGAGTACA 2294
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2295 TCTACCTTCGAGGCAGGAGCCCTCTCATGGTGAACAGCAACTATTATGTCATGGACCTTGTGCTCATCAAGAAT 2368
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2369 ACAGACGTGCAGGCAGCCCGCCTGGGAAACATCATCCACGCCATGATCATGTATCGCCGTAAACTGGACCGTGA 2442
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2443 AGAAATCAAGCCTGTGATGGCACTGGGCATAGTGCCTATGTGCTCCTACCAGATGGAGAGGATGTTCAACACCA 2516
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2517 CTCGGATCCCGGGCAAGGACACAGATGTGCTACAGCACCTCTCAGACAGCCGGCACGTGGCTGTCTACCACAAG 2590
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2591 GGACGCTTCTTCAAGCTGTGGCTCTATGAGGGCGCCCGTCTGCTCAAGCCTCAGGATCTGGAGATGCAGTTCCA 2664
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2665 GAGGATCCTGGACGACCCCTCCCCACCTCAGCCTGGGGAGGAGAAGCTGGCAGCCCTCACTGCAGGAGGAAGGG 2738
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2739 TGGAGTGGGCGCAGGCACGCCAGGCCTTCTTTAGCTCTGGAAAGAATAAGGCTGCCTTGGAGGCCATCGAGCGT 2812
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2813 GCCGCTTTCTTCGTGGCCCTGGATGAGGAATCCTACTCCTATGACCCCGAAGATGAGGCCAGCCTCAGCCTCTA 2886
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2887 TGGCAAGGCCCTGCTACATGGCAACTGCTACAACAGGTGGTTTGACAAATCCTTCACTCTCATTTCCTTCAAGA 2960
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 2961 ATGGCCAGTTGGGTCTCAATGCAGAGCATGCGTGGGCAGATGCTCCCATCATTGGGCACCTCTGGGAGTTTGTC 3034
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3035 CTGGGCACAGACAGCTTCCACCTGGGCTACACGGAGACCGGGCACTGCCTGGGCAAACCGAACCCTGCGCTCGC 3108
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3109 ACCTCCTACACGGCTGCAGTGGGACATTCCAAAACAGTGCCAGGCGGTCATCGAGAGTTCCTACCAGGTGGCCA 3182
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3183 AGGCGTTGGCAGACGACGTGGAGTTGTACTGCTTCCAGTTCCTGCCCTTTGGCAAAGGCCTCATCAAGAAGTGC 3256
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3257 CGGACCAGCCCTGATGCCTTTGTGCAGATCGCGCTGCAGCTGGCTCACTTCCGGGGGTAAGTTCTGCCTGACCT 3330
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3331 ATGAGGCCTCAATGACCAGAATGTTCCGGGAGGGACGGACTGAGACTGTGCGTTCCTGTACCAGCGAGTCCACA 3404
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3405 GCCTTTGTGCAGGCCATGATGGAGGGGTCCCACACAAAAGCAGACCTGCGAGATCTCTTCCAGAAGGCTGCTAA 3478
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3479 GAAGCACCAGAATATGTACCGCCTGGCCATGACCGGGGCAGGGATCGACAGGCACCTCTTCTGCCTTTACTTGG 3552
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3553 TCTCCAAGTACCTAGGAGTCAGCTCTCCTTTCCTTGCTGAGGTGCTCTCGGAACCCTGGCGTCTCTCCACCAGC 3626
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3627 CAGATCCCCCAATCCCAGATCCGCATGTTCGACCCAGAGCAGCACCCCAATCACCTGGGCGCTGGAGGTGGCTT 3700
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3701 TGGCCCTGTAGCAGATGATGGCTATGGAGTTTCCTACATGATTGCAGGCGAGAACACGATCTTCTTCCACATCT 3774
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3775 CCAGCAAGTTCTCAAGCTCAGAGACGAACGCCCAGCGCTTTGGAAACCACATCCGCAAAGCCCTGCTGGACATT 3848
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3849 GCTGATCTTTTCCAAGTTCCCAAGGCCTACAGCTGAAGGTTGGAGAAATGCCAGCTGCCCTTTCGTCCCCACAC 3922
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3923 TGTGGAGGAAGGGACCTGTGGCAGCTCACAGGCATGAGGGGTGGCCGTGCACAGGTGCCCAGGCTCCAAGGACA 3996
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 3997 GCTCCGGCAGCAGGTCCTCGCTGGGCAGATGCTGCTCCCTGAGGGCCCAGGTGGTGGAGCCCTTAGGTACCTGT 4070
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4071 GTTTTGTTTGGGAACTCGGAGGCCCTCCCCCTCCCCCAGCTCAGACCACAGAGGTGGCAAGAGAAGGGCTGAAG 4144
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4145 CTGGAAGACTGTTCATGAGGGACTTGTGTGACCTGCTTTGAAATGTGTGACTCTGCTGAGTGACGTAGGCTCTG 4218
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 4219 AGATAGCTGTCCACGCCCACGTGTTTGCTTGGAATAAATACTTGCCTCAGAACCTTCAAAAAAAAAAAAAAAAA 4292
Query 1186 - 1185
Sbjct 4293 A 4293
