Nucleotide Global Alignment

Description

• Query: TRCN0000489626
• Subject: XM_017314246.1
• Aligned Length: 1282
• Identities: 972
• Gaps: 196

Alignment

Query    1  ATGGGAGGGCACCCGCA-GCTCCGTCTCGTCAAGGCCCTTCTCCTTCTGGGG---CTGAACCCCGTCTCTGCCT  70
                            | ||||.||.|                    ||.||   |.||.||||  |||.|||.
Sbjct    1  ----------------ATGCTCTGTGT--------------------TGAGGTTACAGATCCCC--CTCAGCCA  36

Query   71  CCCTCCAGGACCAG--CACTGCGAGAGCCTGTCCCTGGCCAGCAA-CATCTCAGGACTGCAGTGCAACGCATCC  141
            |.| ||||    ||  ||                        ||| .||.||||||.|.||    |||.||   
Sbjct   37  CAC-CCAG----AGTTCA------------------------CAAGGATGTCAGGAATCCA----AACCCA---  74

Query  142  GTGGACCTCATTGGCACCTGCTGGCCCCGCAGCCCTGCGGGGCAGCTAGTGGTTCGGCCCTGCCCTGCCTTTTT  215
              ||..||||                 |.|||||     ||.|          |||                  
Sbjct   75  --GGTTCTCA-----------------CTCAGCC-----GGAC----------TCG------------------  96

Query  216  CTATGGTGTCCGCTACAATACCACAAACAATGGCTAC---CGGGAGTG-----------CCTGGCCAATGGCAG  275
                |||||         .||||..|| .||||..||   |.||||||           |||||   |.|||.|
Sbjct   97  ----GGTGT---------GACCAGGAA-GATGGGAACCTTCAGGAGTGAGAAATGCAATCCTGG---AAGGCTG  153

Query  276  ------CTGGGCCGCCCG-----CGTGAATTACTCCGAGTGCCAGGAGATCCTCAATGAGGA----GAAAAAAA  334
                  |||..||..|||     .|||           |||.|||||    |..||.|| ||    |||.||.|
Sbjct  154  GGGTCTCTGCACCCACCGGAGCCTGTG-----------GTGTCAGGA----CAGAACGA-GACACGGAAGAAGA  211

Query  335  GCAAGGTGCACTACCATGTCGCAGTCATCATCAACTACCTGGGCCACTGTATCTCCCTGGTGGCCCTCCTGGTG  408
            ||||.|||||||||||..|.||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  212  GCAAAGTGCACTACCACATTGCCGTCATCATCAACTACCTGGGCCACTGCATCTCCCTGGTGGCCCTCCTGGTG  285

Query  409  GCCTTTGTCCTCTTTCTGCGGCTCAGGAGCATCCGGTGCCTGCGAAACATCATCCACTGGAACCTCATCTCCGC  482
            ||||||||||||||.|||||||||||||||||||||||||||.|.||||||||||||||||||||||||||.||
Sbjct  286  GCCTTTGTCCTCTTCCTGCGGCTCAGGAGCATCCGGTGCCTGAGGAACATCATCCACTGGAACCTCATCTCGGC  359

Query  483  CTTCATCCTGCGCAACGCCACCTGGTTCGTGGTCCAGCTAACCATGAGCCCCGAGGTCCACCAGAGCAACGTGG  556
            .||||||||||||||||||||.|||||.|||||||||||.|||.||||||||||||||||||||||||||||||
Sbjct  360  TTTCATCCTGCGCAACGCCACGTGGTTTGTGGTCCAGCTCACCGTGAGCCCCGAGGTCCACCAGAGCAACGTGG  433

Query  557  GCTGGTGCAGGTTGGTGACAGCCGCCTACAACTACTTCCATGTGACCAACTTCTTCTGGATGTTCGGCGAGGGC  630
            .||||||||||.||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||
Sbjct  434  CCTGGTGCAGGCTGGTGACAGCCGCCTACAACTACTTCCACGTAACCAACTTCTTCTGGATGTTCGGTGAGGGC  507

Query  631  TGCTACCTGCACACAGCCATCGTGCTCACCTACTCCACTGACCGGCTGCGCAAATGGATGTTCATCTGCATTGG  704
            |||||||||||||||||||||||.|||||.||||||||.|||||.||||||||.|||||||||.|||||||.||
Sbjct  508  TGCTACCTGCACACAGCCATCGTACTCACGTACTCCACCGACCGTCTGCGCAAGTGGATGTTCGTCTGCATCGG  581

Query  705  CTGGGGTGTGCCCTTCCCCATCATTGTGGCCTGGGCCATTGGGAAGCTGTACTACGACAATGAGAAGTGCTGGT  778
            ||||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||||||||.||||||||||
Sbjct  582  CTGGGGTGTGCCTTTCCCCATCATTGTGGCTTGGGCCATTGGGAAACTTTACTACGACAATGAAAAGTGCTGGT  655

Query  779  TTGGCAAAAGGCCTGGGGTGTACACCGACTACATCTACCAGGGCCCCATGATCCTGGTCCTGCTGATCAATTTC  852
            ||||||||.|.|||||.||.||.||.||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  656  TTGGCAAACGTCCTGGAGTATATACTGACTACATCTACCAGGGCCCCATGATCCTGGTCCTGCTGATCAACTTT  729

Query  853  ATCTTCCTTTTCAACATCGTCCGCATCCTCATGACCAAGCTCCGGGCATCCACCACGTCTGAGACCATTCAGTA  926
            |||||.||.||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||||
Sbjct  730  ATCTTTCTCTTCAACATTGTCCGCATCCTCATGACCAAACTCCGAGCATCCACCACATCTGAGACTATTCAGTA  803

Query  927  CAGGAAGGCTGTGAAAGCCACTCTGGTGCTGCTGCCCCTCCTGGGCATCACCTACATGCTGTTCTTCGTCAATC  1000
            |||||||||||||||.||||||||||||||..||||||||||||||||||||||||||.|||||||||||||.|
Sbjct  804  CAGGAAGGCTGTGAAGGCCACTCTGGTGCTCTTGCCCCTCCTGGGCATCACCTACATGTTGTTCTTCGTCAACC  877

Query 1001  CCGGGGAGGATGAGGTCTCCCGGGTCGTCTTCATCTACTTCAACTCCTTCCTGGAATCCTTCCAGGGCTTCTTT  1074
            |.||||||||.|||||||||.||||.||||||||||||||||||||.||||||||.|||||.|||||||||||.
Sbjct  878  CTGGGGAGGACGAGGTCTCCAGGGTTGTCTTCATCTACTTCAACTCTTTCCTGGAGTCCTTTCAGGGCTTCTTC  951

Query 1075  GTGTCTGTGTTCTACTGTTTCCTCAATAGTGAGGTCCGTTCTGCCATCCGGAAGAGGTGGCACCGGTGGCAGGA  1148
            ||||||||||||||.|||||.||.||.|||||||||||.||||||||||||||||||||||..||.||||||||
Sbjct  952  GTGTCTGTGTTCTATTGTTTTCTGAACAGTGAGGTCCGCTCTGCCATCCGGAAGAGGTGGCGGCGATGGCAGGA  1025

Query 1149  CAAGCACTCGATCCGTGCCCGAGTGGCCCGTGCCATGTCCATCCCCACCTCCCCAACCCGTGTCAGCTTTCACA  1222
            |||||||||.|||.|.||||||||||||||.|||||||||||||||||||||||.|||.|.||||||||.||||
Sbjct 1026  CAAGCACTCCATCAGAGCCCGAGTGGCCCGCGCCATGTCCATCCCCACCTCCCCCACCAGAGTCAGCTTCCACA  1099

Query 1223  GCATCAAGCAGTCCACAGCAGTCG  1246
            ||||||||||||||||||||||. 
Sbjct 1100  GCATCAAGCAGTCCACAGCAGTG-  1122