Nucleotide Global Alignment

Description

Query:
TRCN0000489639
Subject:
NR_146936.2
Aligned Length:
2818
Identities:
682
Gaps:
2116

Alignment

Query    1  ------------------------ATGGAGCA-TGCCTTT---------------------ACCCCGTT-----  23
                                    || ||.|| ||  |||                     |.||||||     
Sbjct    1  GGTTGTATGCCATAGCTCTGTAACAT-GAACAGTG--TTTCCAATAAACTGTCCACCGCAAAACCCGTTAAAAA  71

Query   24  -----GGAGCCCCTGCTTTCCA----CTG-GGAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGAC  87
                 .||||        ||||    ||| |||..|.|.|| |.||||  |..|||...||          |||
Sbjct   72  ATGAGTGAGC--------TCCATGAGCTGAGGAGCTAGCAG-ATTGCC--GGGATTACAAA----------GAC  124

Query   88  AACTA---------TTTTCGTCATC----TTTGGAACAA-AGCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCC  147
            |||.|         .||||.|.|.|    |||   |||| ..||||||||||||||||||||||||||||||||
Sbjct  125  AACGAGACAGGACCCTTTCCTTAGCAGGATTT---ACAATCTCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCC  195

Query  148  AACCGCTTATATGATATCACCGAAGGAGAGAGAGAA--------------------------------------  183
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  196  AACCGCTTATATGATATCACCGAAGGAGAGAGAGAAAGATTCCTCTGACAGTATCCTCCAAGACCTGACATGGA  269

Query  184  --------------------------------------------------------------------------  183
                                                                                      
Sbjct  270  CAATGTGTGAAAAAGCGCTCAACCTCCAACTTGAAACTCTCCTCGAGGCCCCCAGCCACCAGTCATCTCATCAG  343

Query  184  -------------------------------------------------------------------AGCTTTT  190
                                                                               |||||||
Sbjct  344  GACACCGAAAGACACCCATTACTGTGGAGCTTCCAAGGGTCTTGGCAACTCTTTTATCGGAAACGAGAGCTTTT  417

Query  191  TGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGGATGT  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  418  TGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGGATGT  491

Query  265  GAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATAGA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  492  GAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATAGA  565

Query  339  AGAAAAAGACTTAAA-----------------------------------------------------------  353
            |||||||||||||||                                                           
Sbjct  566  AGAAAAAGACTTAAAGAAGAAACAGTGAAAGGAATACTGTTCAATTCCAACATCAGCTGTGTAACCGAGGCATC  639

Query  354  ---------------------------------------------------------------GGTTGATGTGA  364
                                                                           |||||||||||
Sbjct  640  GTAATACTTTTATGACAAGTTTCACTACCTTTTTGCCTGTGCCAGTGTACCTCAAAGGGATATGGTTGATGTGA  713

Query  365  TCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACT  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  714  TCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACT  787

Query  439  CACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAG  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  788  CACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAG  861

Query  513  GTTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTA  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  862  GTTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTA  935

Query  587  CAACCACAGGCCTCAAGTGGAACCTCA-----------------------------------------------  613
            |||||||||||||||||||||||||||                                               
Sbjct  936  CAACCACAGGCCTCAAGTGGAACCTCAGAACTTGTGACTACACTAGGACCACCTGGATAGCCAAGGATAATCCC  1009

Query  614  -----------------------------------------------------------CAAATGATGTGCTTG  628
                                                                       |||||||||||||||
Sbjct 1010  GTCCCAAGACTAATCAGATTAATCAGACTTAATCACATCTGTAAAGTTCCTCTTGCCATCAAATGATGTGCTTG  1083

Query  629  CTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCA  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084  CTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCA  1157

Query  703  CTCCTCTGGACCATGGCCATCAAAAGC-----------------------------------------------  729
            |||||||||||||||||||||||||||                                               
Sbjct 1158  CTCCTCTGGACCATGGCCATCAAAAGCTAACCTGTTGACTGGCATCCATAAGTGTGCCTCTGCCTTATCTCATT  1231

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1232  TCTCAACAGTTCATTGCTCAACAAGAACGATTCACCTGGGTTTGCAAGAATCTAAACCTCTCTAGGGGAAGCCC  1305

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1306  ACTGGGTTTAAAGATGTTAGTGTTTAGATAATACAGGTAACATTATAAATGACAGATCTCAATTTTATAGTAGT  1379

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1380  GGGAAAGATACATGCTAAGAAAGCAAATAAGCTCTATTATATTCGGTTGGAACCTAATGGGAATCATTCCACTA  1453

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1454  TACAATTCAGTACTGATTATTCTTCTTACATTATTAATCATTCCATTTATCCTAGAAAATTGTTTTTAATTTGA  1527

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1528  ATCAGAGAAAACTGTTGAGGTTCCTCTTGGAGTCTAGAACATCCTTAAATGTCTAACAACAAGGGCTACCTCTG  1601

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1602  AGTACCTTTTAGTATTAGTTTTCTGTATATGATATATATTATCTTATACTGAAAAAAAATTCCTTTCAGATTGG  1675

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1676  GGTGTTAGAAGTGCACCAGGTCACTCTGACCTTATTACTGTCTTTGGTATTGTCTTAAATAAATCAAGAATCAT  1749

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1750  TGACCTAATTGTTAAATTTAAAAATAGGTAGTTAGCAATAGGTGGAAAGAGAAATGATGTGAAAGATAAATGAT  1823

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1824  GATTCGTGGAGCCCTACTCACACATTAACCCCCAAATTCAAAAGTAAGAATGCAAAAGTCTAGAGGGGGTAACA  1897

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1898  GTCTGCATCATCATCACAACCTAAATGGAGAAAGCTGTGCAGAGGAAACTTAAGCATAAAAATTGAATTCGTTT  1971

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 1972  CTGACATACCTTAGACTGAAAAACTGTTGGTTCATCCAGAAGTGTATTCATATTACCAGAAAATGAGTTTGTCT  2045

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2046  ATGGGGATACATGAACTTCATATACTAAGGAGCCTAACTCCAAAGCCTGCGTTCTCATCCCAGTCTGATATTCA  2119

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2120  CCTAAGTTTCCGGACCCTTTTCCTTAGCTGTAAAATGGAAGCGGTTGGACTGATGGTGTCTGAGGTTCTTTCCC  2193

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2194  ACACTGAAATTCTAAATATTGACACTTAGCAGTCATAGGGCTGATAATACACACAGTTACTGACTTAGCCTAAA  2267

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2268  CAACCTGGTGCATCGAAATGTATTCACCTTTCTTTTGTAAAGAGACCATCTTCTATCTTCTTTCCACCTTTCTC  2341

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2342  TGTTTTATGAAACCAACTGTTGACATACAAACCATGATTGAAGGAGAACCTGTCCAACATGTTTTATGTACACA  2415

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2416  AATCCCTATGTTGCTATAAGAAAAGTGAAAGTAACTGTTTTCTTCTTGGTGCTATGACAGTGTGAGACTCAGGT  2489

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2490  TGTCTGTAGAGAATGAAAGGAGCAGTGGCCCGCGTGATTGTGGCATTTAAGGAGCAGTGGCCCATGTGACTGTG  2563

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2564  GCATTTTCGGCACTTTTCATTACTTTCTGCTTGACCGGAAGTTGAGGCTTAGCTATGTTTCCATCTTCAGTTTC  2637

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2638  TGAAGACTAGTTATATATTCCTTACTAGAAATATATTCATAATATATAAAAGAAATATATCTGTGATTTTAAAA  2711

Query  730  --------------------------------------------------------------------------  729
                                                                                      
Sbjct 2712  TTTTGCTACCAAAGAATGCATGTTCTGTGTGCCCTGAAAATGTTACCAGTGTTAATAAATGGATACTTATCAAA  2785

Query  730  ------  729
                  
Sbjct 2786  AAAGAA  2791

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