Nucleotide Global Alignment
Description
- Query:
- TRCN0000489641
- Subject:
- NR_045582.2
- Aligned Length:
- 3791
- Identities:
- 2127
- Gaps:
- 1664
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAATAGCACACAACCACTGTGAGCTGTATGCGATTCAGAAACCAAGACCAAATTTTGCTCACTTTCATTAAT 74
Query 1 ---------------------ATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTTTC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGTTGCTCAGATAGAAGGAAATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTTTC 148
Query 54 TCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTC 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTC 222
Query 128 AGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGT--------------- 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGTGGTGAGTGAAGCCCC 296
Query 187 ---------GGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTC 251
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCAGTCACGGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTC 370
Query 252 CCAATATCCTTTTGAGGCAGAAACACCTGAATGTT--------------------------------------- 286
|||||||||||||||||||||||||||||||||||
Sbjct 371 CCAATATCCTTTTGAGGCAGAAACACCTGAATGTTCTTTTCATTTCTTTCTTTTCATTACCCTCCTCTTCCTGG 444
Query 287 ------------------------------------------TGGTCGGTTCTGTGCCAGTGCAATGTCTTTGC 318
||||||||||||||||||||||||||||||||
Sbjct 445 TCCCTCACTGTCATCATGCCTTACCACTTCCCCTTGATTCAGTGGTCGGTTCTGTGCCAGTGCAATGTCTTTGC 518
Query 319 CAAGGTCTGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAAT 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAGGTCTGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAAT 592
Query 393 GTCACTTCAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGT 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTCACTTCAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGT 666
Query 467 ACCTGCAAAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCTGCAAAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTAT 740
Query 541 CTCAGTCATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAAT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCAGTCATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAAT 814
Query 615 TGAAGATAATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAAGATAATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGA 888
Query 689 TGAATAACGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTT 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGAATAACGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTT 962
Query 763 GAAGGCAACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAG 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAGGCAACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAG 1036
Query 837 GAAAAACAAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAA 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAAAAACAAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAAT------------ 1098
Query 911 GTAATAAGATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCTAT 984
Sbjct 1099 -------------------------------------------------------------------------- 1098
Query 985 AATCCAATCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGGAT 1058
||||||||||||||||
Sbjct 1099 ----------------------------------------------------------TCAGCCTAGAAGGGAT 1114
Query 1059 TGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCC 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1115 TGAAATTTCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCC 1188
Query 1133 AGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTC 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 AGTACTGTGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTC 1262
Query 1207 TTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCAT 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 TTGGCAAGCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCAT 1336
Query 1281 TTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACT 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 TTGCATGCGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACT 1410
Query 1355 GCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCG 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 GCTTAATGGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCG 1484
Query 1429 CAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTT 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1485 CAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTT 1558
Query 1503 ACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAAT 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 ACTGTTAACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAAT 1632
Query 1577 GCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 GCAGAACAATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAG 1706
Query 1651 GAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGG 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1707 GAATTTTTCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGG 1780
Query 1725 AGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATG 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 AGCCCAGATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATG 1854
Query 1799 GAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATG 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 GAAGCATGTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATG 1928
Query 1873 ATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATT 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1929 ATCCTTGCCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATT 2002
Query 1947 TCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACA 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2003 TCTTTCACTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACA 2076
Query 2021 GTGCTTTGAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAAC 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2077 GTGCTTTGAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAAC 2150
Query 2095 TACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTG 2168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2151 TACAGACAAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTG 2224
Query 2169 GCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTT 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2225 GCCACTGCAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTT 2298
Query 2243 CTCAATCAACGAGACTCAATTCCTATTCA--------------------------------------------- 2271
|||||||||||||||||||||||||||||
Sbjct 2299 CTCAATCAACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTGGGGG 2372
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2373 TGCTTCATGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATT 2446
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2447 TTACAAGGACATGAGGAAAAATAAAAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTATAT 2520
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2521 ATATTAGTAGACATTTTGCATAAGAAATTAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACATGC 2594
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2595 ATTTATTGAGTACCCACTACTATGTGCATAGCATTGCAATATAGTCCTGGAAGTAGACAGTGCAGAACCTTTCA 2668
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2669 ATCTGTAGATGGTGTTTAATGACAAAAGACTATACAAAGTCCATCTGCAGTTCCTAGTTTAAAGTAGAGCTTTA 2742
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2743 CCTGTCATGTGCATCAGCAAGAATCATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTCAGTGTATT 2816
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2817 TGCATCATAGAAAATGTCTGACTGTTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAAGT 2890
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2891 TTCCATACACTTGAGAGCCAACACAACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGCAC 2964
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2965 TTCTTTTGGCACTTCCTGCCCAGTTTTCTCTTTGCTTTAAATGAACATCATCATATGGAATTGGAATAGGAGAG 3038
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3039 TATGAGTACGGCAGAGAAGTGGATCAGAAAAACTAGAATGAGGATAAACATTTACATTAGTGGAAACTCCTGAA 3112
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3113 ATAAATCCTTGTATTGTCAGTTAACTGATTTTCAACAAGGATGCCAAGACAAAAAGGCTTTTCAACAAACCGTG 3186
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3187 CTGTTTTAAGAACAGACCTAAGTGGTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATATC 3260
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3261 TCAGTAAAGCAGTTAAAAGGAAAAAGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGTCT 3334
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3335 GTATGTACACATTTCACTTTAAGCAGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCAGC 3408
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3409 ACGTGAGATACTAACTTTTTAACTAGTTGTTCTTCTCTAGTCTCTACGTTATTAGAATTTTTTGCTTTCATAAT 3482
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3483 GTGAAACCTTTAAGCAGGAGAAGAAAATGTTTTCAGATAGTTTCAAATACACCAAAAATGTTTGAAACACAAAA 3556
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3557 ATACTGGAATCAAACCATAATGCACTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAATAAATTATCTGA 3630
Query 2272 ----------------- 2271
Sbjct 3631 AATTTAACTATTAAAAA 3647
