Nucleotide Global Alignment
Description
- Query:
- TRCN0000489641
- Subject:
- NR_045583.2
- Aligned Length:
- 3767
- Identities:
- 2130
- Gaps:
- 1637
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAATAGCACACAACCACTGTGAGCTGTATGCGATTCAGAAACCAAGACCAAATTTTGCTCACTTTCATTAAT 74
Query 1 ---------------------ATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTTTC 53
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGTTGCTCAGATAGAAGGAAATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATT---- 144
Query 54 TCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTC 127
Sbjct 145 -------------------------------------------------------------------------- 144
Query 128 AGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGTGGAGACAACAATGGA 201
||||||||||||||
Sbjct 145 ------------------------------------------------------------GAGACAACAATGGA 158
Query 202 TGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTCCCAATATCCTTTTGAGGCAGAAAC 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 TGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTCCCAATATCCTTTTGAGGCAGAAAC 232
Query 276 ACCTGAATGTT--------------------------------------------------------------- 286
|||||||||||
Sbjct 233 ACCTGAATGTTCTTTTCATTTCTTTCTTTTCATTACCCTCCTCTTCCTGGTCCCTCACTGTCATCATGCCTTAC 306
Query 287 ------------------TGGTCGGTTCTGTGCCAGTGCAATGTCTTTGCCAAGGTCTGGAGCTTGACTGTGAT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CACTTCCCCTTGATTCAGTGGTCGGTTCTGTGCCAGTGCAATGTCTTTGCCAAGGTCTGGAGCTTGACTGTGAT 380
Query 343 GAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAATGTCACTTCAGTGGAACTTAATAAG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 GAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAATGTCACTTCAGTGGAACTTAATAAG 454
Query 417 AAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGTACCTGCAAAACAATAAGATTACAT 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 AAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGTACCTGCAAAACAATAAGATTACAT 528
Query 491 CCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTATCTCAGTCATAACAGAATAACCTTC 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTATCTCAGTCATAACAGAATAACCTTC 602
Query 565 CTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAATTGAAGATAATCACCTCAGTCGAAT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 CTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAATTGAAGATAATCACCTCAGTCGAAT 676
Query 639 TTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGATGAATAACGTCCTCACCCGTTTAC 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGATGAATAACGTCCTCACCCGTTTAC 750
Query 713 CTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTTGAAGGCAACCATATCCATAATTTA 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 CTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTTGAAGGCAACCATATCCATAATTTA 824
Query 787 AGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAGGAAAAACAAAATTAATCACTTAAA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 AGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAGGAAAAACAAAATTAATCACTTAAA 898
Query 861 TGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCAC 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 TGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAAGATTGAAAATCTTCCAC 972
Query 935 CGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCA 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 CGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAATCCAGAAAATTCAAGCA 1046
Query 1009 AACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGGATTGAAATTTCAAATATCCAACAAAG 1082
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1047 AACCAATTTGATTATCTTGTCAAACTCAAGTCTCT---CCTAGAAGGGATTGAAATTTCAAATATCCAACAAAG 1117
Query 1083 GATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTGTGGGTATGCACCACATG 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 GATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTGTGGGTATGCACCACATG 1191
Query 1157 TTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTA 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 TTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAAGCATTATTCAGAGAGTA 1265
Query 1231 TTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTC 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 TTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATGCGACCTTATATCAGGTC 1339
Query 1305 TGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCG 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 TGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAATGGGAATATATTTATTCG 1413
Query 1379 TGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCAT 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 TGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGTGGATGGAGAGTACTCAT 1487
Query 1453 TGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTAACATTTCTGACATTGGA 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1488 TGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTAACATTTCTGACATTGGA 1561
Query 1527 AAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAACAATTACAGTTCTGATTC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1562 AAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAACAATTACAGTTCTGATTC 1635
Query 1601 TCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGC 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1636 TCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTTTCAAAAACTACTATGGC 1709
Query 1675 ACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAAT 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 ACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAGATTTATTCAGTGGCAAT 1783
Query 1749 TTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATC 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 TTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCATGTTTTATAGTGTTCATC 1857
Query 1823 AAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATGATCCTTGCCAAACGTTTTTTCTTT 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 AAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATGATCCTTGCCAAACGTTTTTTCTTT 1931
Query 1897 ATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCACTGCTTCAGGTAGAAAT 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1932 ATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCACTGCTTCAGGTAGAAAT 2005
Query 1971 ACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACCCAATTCTCTATA 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2006 ACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTTGAACCCAATTCTCTATA 2079
Query 2045 CTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGAC 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 CTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGACAAAGAAAATCTATGGAC 2153
Query 2119 AGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGA 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2154 AGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTGCAGGAGATGCCACCTGA 2227
Query 2193 GTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCT 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2228 GTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTTCTCAATCAACGAGACTCAATTCCT 2301
Query 2267 ATTCA--------------------------------------------------------------------- 2271
|||||
Sbjct 2302 ATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTGGGGGTGCTTCATGAGGGATTTACTGGTA 2375
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2376 TGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTTACAAGGACATGAGGAAAAATAA 2449
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2450 AAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTATATATATTAGTAGACATTTTGCATAAG 2523
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2524 AAATTAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACATGCATTTATTGAGTACCCACTACTATG 2597
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2598 TGCATAGCATTGCAATATAGTCCTGGAAGTAGACAGTGCAGAACCTTTCAATCTGTAGATGGTGTTTAATGACA 2671
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2672 AAAGACTATACAAAGTCCATCTGCAGTTCCTAGTTTAAAGTAGAGCTTTACCTGTCATGTGCATCAGCAAGAAT 2745
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2746 CATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTCAGTGTATTTGCATCATAGAAAATGTCTGACTG 2819
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2820 TTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAAGTTTCCATACACTTGAGAGCCAACAC 2893
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2894 AACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGCACTTCTTTTGGCACTTCCTGCCCAGT 2967
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2968 TTTCTCTTTGCTTTAAATGAACATCATCATATGGAATTGGAATAGGAGAGTATGAGTACGGCAGAGAAGTGGAT 3041
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3042 CAGAAAAACTAGAATGAGGATAAACATTTACATTAGTGGAAACTCCTGAAATAAATCCTTGTATTGTCAGTTAA 3115
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3116 CTGATTTTCAACAAGGATGCCAAGACAAAAAGGCTTTTCAACAAACCGTGCTGTTTTAAGAACAGACCTAAGTG 3189
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3190 GTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATATCTCAGTAAAGCAGTTAAAAGGAAAA 3263
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3264 AGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGTCTGTATGTACACATTTCACTTTAAGC 3337
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3338 AGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCAGCACGTGAGATACTAACTTTTTAACT 3411
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3412 AGTTGTTCTTCTCTAGTCTCTACGTTATTAGAATTTTTTGCTTTCATAATGTGAAACCTTTAAGCAGGAGAAGA 3485
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3486 AAATGTTTTCAGATAGTTTCAAATACACCAAAAATGTTTGAAACACAAAAATACTGGAATCAAACCATAATGCA 3559
Query 2272 ------------------------------------------------------------------- 2271
Sbjct 3560 CTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAATAAATTATCTGAAATTTAACTATTAAAAA 3626
