Nucleotide Global Alignment
Description
- Query:
- TRCN0000489654
- Subject:
- XM_006504888.3
- Aligned Length:
- 2272
- Identities:
- 1459
- Gaps:
- 604
Alignment
Query 1 ATGTCGAACCCCGGGACACGCAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGTGTTATGTGCCAAGAACCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGCAAAGAAAGACTTCTTCAGGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATGGGTCTGGGCAGTGCCACT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAACCGACACTGTGAAAAACACATTGGACCCAAAGTGGAACCAGCACTATGATCTATATGTTGGGAAAACGGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCGATAACCATTAGCGTGTGGAACCATAAGAAAATTCACAAGAAACAGGGAGCTGGCTTCCTGGGCTGTGTGCG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTGCTCTCCAATGCCATCAGCAGATTAAAAGATACCGGATACCAGCGTTTGGATCTATGCAAACTAAACCCCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CAGATACTGATGCAGTTCGTGGCCAGATAGTGGTCAGTTTACAGACACGAGACAGAATAGGAACCGGCGGCTCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GTGGTGGACTGCAGAGGACTGTTAGAAAATGAAGGAACGGTGTATGAAGACTCCGGGCCTGGGAGGCCGCTCAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTGCTTCATGGAGGAACCAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTGGAGGAGGGAATTGCAGGTTCG 592
|||||||||||.|||||.||.||||||.|.||.|||||.||.||.|||||.|||||.||||||||.|
Sbjct 1 -------ATGGAGGAACCTGCCCCATATACAGATGGTACTGGTGCAGCAGCAGGAGGCGGGAACTGCAGGTTTG 67
Query 593 TGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCTGATGTGCGAGGTTCACTACAG 666
|||||||.|||||.||||||||.|||||.|.||.||||||.||.|||||.|||||.||.|||||..|..|||||
Sbjct 68 TGGAGTCTCCAAGCCAAGATCAGAGACTCCTGGTACAGCGACTCCGAAATCCTGAGGTTCGAGGGCCCTTACAG 141
Query 667 ACGCCCCAGAACCGACCACACGGCCACCAGTCCCCGGAACTGCCCGAAGGCTACGAACAAAGAACAACAGTCCA 740
||.|||||||||||||||||.|||||||||||.||.||.|||||.||||||||.||.|||||.||||||||.||
Sbjct 142 ACACCCCAGAACCGACCACATGGCCACCAGTCGCCAGAGCTGCCTGAAGGCTATGAGCAAAGGACAACAGTGCA 215
Query 741 GGGCCAAGTTTACTTTTTGCATACACAGACTGGAGTTAGCACGTGGCACGACCCCAGGAT-------------- 800
|||.|||||||||||||||||.||.|||||||||||.||.||.|||||.|||||||||||
Sbjct 216 GGGACAAGTTTACTTTTTGCACACGCAGACTGGAGTCAGTACATGGCATGACCCCAGGATCCCCAGTCCCTTGG 289
Query 801 --ACCA--------------------------------------------------------------AGAGAC 810
|||| ||||||
Sbjct 290 GGACCATTCCGGGGGGAGATGAAGCTTTTCTATACGAATTCCTTCTACAAGGCCATACATCCGAGCCCAGAGAC 363
Query 811 CTTAACAGTGTGAACTGTGATGAACTTGGACCACTGCCGCCAGGCTGGGAAGTCAGAAGTACAGTTTCTGGGAG 884
|||||||||||||||||.|||||||||||.||||||||.|||||||||||||||.||||.|||||.||.||.||
Sbjct 364 CTTAACAGTGTGAACTGCGATGAACTTGGGCCACTGCCTCCAGGCTGGGAAGTCCGAAGCACAGTGTCGGGAAG 437
Query 885 GATATATTTTGTAGATCATAATAACCGAACAACCCAGTTTACAGACCCAAGGTTACACCACATCATGAATCACC 958
.||.||||||||||||||.|||||..|.|||||||||||||||||.|||.||.|.|||||||||||||||||||
Sbjct 438 AATCTATTTTGTAGATCACAATAATAGGACAACCCAGTTTACAGATCCACGGCTTCACCACATCATGAATCACC 511
Query 959 AGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTGGAGGACGAGGAGCTTCCT 1032
|||||||||||||||||||||||||||||||||..|||||||||||||||||..||||||||||||||||||||
Sbjct 512 AGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCAGCTGCCCAGTGAGGGCTCCGTGGAGGACGAGGAGCTTCCT 585
Query 1033 GCCCAGAGATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGCTTCAGCAGCCCCA 1106
|||||||||||.||.||.||..|||||||||||||.|||||.|||||.|||||.||.||.||||||||||||||
Sbjct 586 GCCCAGAGATATGAGAGGGACTTAGTCCAGAAGCTCAAAGTTCTCAGGCACGAGCTCTCTCTTCAGCAGCCCCA 659
Query 1107 AGCTGGTCATTGCCGCATCGAAGTGTCCAGAGAAGAAATCTTTGAGGAGTCTTACCGCCAGATAATGAAGATGC 1180
.||||||||.||.||.||.|||||.|||||||||||.||.|||||||||||.||.||||||||.||||||||||
Sbjct 660 GGCTGGTCACTGTCGAATAGAAGTCTCCAGAGAAGAGATATTTGAGGAGTCGTATCGCCAGATCATGAAGATGC 733
Query 1181 GACCGAAAGACTTGAAAAAACGGCTGATGGTGAAATTCCGTGGGGAAGAAGGTTTGGATTACGGTGGTGTGGCC 1254
|.||.||||||.|.||.||.||.|||||||||||.|||||.|||||.|||||||||||.||.|||||.|||||.
Sbjct 734 GGCCAAAAGACCTAAAGAAGCGCCTGATGGTGAAGTTCCGAGGGGAGGAAGGTTTGGACTATGGTGGAGTGGCT 807
Query 1255 AGGGAGTGGCTTTACTTGCTGTGCCATGAAATGCTGAATCCTTATTACGGGCTCTTCCAGTATTCTACGGACAA 1328
.||||||||||.||.|||.||||||||||||||.||||.||.||.||.||.||||||||||||||.||||||||
Sbjct 808 CGGGAGTGGCTGTATTTGTTGTGCCATGAAATGTTGAACCCGTACTATGGACTCTTCCAGTATTCCACGGACAA 881
Query 1329 TATTTACATGTTGCAAATAAATCCGGATTCTTCAATCAACCCCGACCACTTGTCTTATTTCCACTTTGTGGGGC 1402
||||||||...||||.||.||.||.||||||||.||||||||.|||||..||||.||.||||||||||||||.|
Sbjct 882 TATTTACACACTGCAGATCAACCCAGATTCTTCTATCAACCCTGACCATCTGTCATACTTCCACTTTGTGGGTC 955
Query 1403 GGATCATGGGGCTGGCTGTGTTCCATGGACACTACATCAACGGGGGCTTCACAGTGCCCTTCTACAAGCAGCTG 1476
|.||||||||.||||||||||||||.|||||||||||.||.|||||.||||||||.||.||||||||||||||.
Sbjct 956 GCATCATGGGTCTGGCTGTGTTCCACGGACACTACATAAATGGGGGTTTCACAGTTCCGTTCTACAAGCAGCTC 1029
Query 1477 CTGGGGAAGCCCATCCAGCTCTCAGATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGCTTGGTGTGGATCCT 1550
|||||||||||.||||||||.||.||.|||||.||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 1030 CTGGGGAAGCCAATCCAGCTGTCGGACCTGGAGTCCGTGGACCCAGAACTGCATAAGAGCTTGGTGTGGATTCT 1103
Query 1551 AGAGAACGACATCACGCCTGTACTGGACCACACCTTCTGCGTGGAACACAACGCCTTCGGGCGGATCCTGCAGC 1624
||||||.||||||||||||||..||||.||.||||||||||||||.||||||||.|||||||||||.||.||||
Sbjct 1104 AGAGAATGACATCACGCCTGTGTTGGATCATACCTTCTGCGTGGAGCACAACGCTTTCGGGCGGATTCTCCAGC 1177
Query 1625 ATGAACTGAAACCCAATGGCAGAAATGTGCCAGTCACAGAGGAGAATAAGAAAGAATACGTCCGGTTGTATGTA 1698
|||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||||||.|||||||.
Sbjct 1178 ATGAACTGAAACCCAATGGCAGAAATGTGCCTGTCACTGAGGAGAACAAGAAGGAATACGTCCGGCTGTATGTG 1251
Query 1699 AACTGGAGGTTTATGAGAGGAATCGAAGCCCAGTTCTTAGCTCTGCAGAAGGGGTTCAATGAGCTCATCCCTCA 1772
|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.||.|||||.||.||
Sbjct 1252 AACTGGAGGTTTATGAGAGGAATCGAAGCCCAGTTCTTAGCACTTCAGAAGGGGTTTAACGAACTCATTCCCCA 1325
Query 1773 ACATCTGCTGAAGCCTTTTGACCAGAAGGAACTGGAGCTGATCATAGGCGGCCTGGATAAAATAGACTTGAACG 1846
|||..||||||||||.|||||||||||||||||.||||||||.|||||.||.||||||||.||||||.||||||
Sbjct 1326 ACACTTGCTGAAGCCCTTTGACCAGAAGGAACTAGAGCTGATAATAGGTGGGCTGGATAAGATAGACCTGAACG 1399
Query 1847 ACTGGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAGCGGTG 1920
||||||||||.|||||.||||||||.|||||||||||.||||||||||||||..|||||||||||||.||||||
Sbjct 1400 ACTGGAAGTCCAACACCCGGCTGAAACACTGTGTGGCAGACAGCAACATCGTCAGGTGGTTCTGGCAGGCGGTG 1473
Query 1921 GAGACGTTCGATGAAGAAAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCCAAGG 1994
|||||.||||||||.||.|||||.|||||.|||||||||||||||||.||.|||||..||||.||.||||||||
Sbjct 1474 GAGACCTTCGATGAGGAGAGGAGAGCCAGACTCCTGCAGTTTGTGACAGGATCCACAAGAGTTCCTCTCCAAGG 1547
Query 1995 CTTCAAGGCTTTGCAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAGACGCGAACA 2068
||||||||||.|||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||.|
Sbjct 1548 CTTCAAGGCTCTGCAAGGCTCTACAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAATA 1621
Query 2069 CAGACAACCTTCCGAAGGCCCATACCTGCTTTAACCGGATCGACATTCCACCATATGAGTCCTATGAGAAGCTC 2142
||||||||||.||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||
Sbjct 1622 CAGACAACCTGCCCAAGGCCCATACCTGCTTTAATCGGATCGACATCCCACCCTATGAGTCCTATGAGAAGCTC 1695
Query 2143 TACGAGAAGCTGCTGACAGCCGTGGAGGAGACCTGCGGGTTTGCTGTGGAGG 2194
||.|||||||||||||||||.||||||||.|||||.||.|||||.||||||
Sbjct 1696 TATGAGAAGCTGCTGACAGCGGTGGAGGAAACCTGTGGCTTTGCAGTGGAG- 1746
