Nucleotide Global Alignment

Description

Query:
TRCN0000489697
Subject:
XM_006508170.2
Aligned Length:
1222
Identities:
814
Gaps:
313

Alignment

Query    1  ATGACGCTGGACGTGGGGCCGGAGGATGAGCTGCCCGACTGGGCCGCCGCCAAAGAGTTTTACCAGAAGTACGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCTAAGGACGTCATCGGCAGAGGAGTGAGCTCTGTGGTCCGCCGTTGTGTTCATCGAGCTACTGGCCACGAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGCGGTGAAGATTATGGAAGTGACAGCTGAGCGGCTGAGTCCTGAGCAGCTGGAGGAGGTGCGGGAAGCCACA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGGCGAGAGACACACATCCTTCGCCAGGTCGCCGGCCACCCCCACATCATCACCCTCATCGATTCCTACGAGTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTCTAGCTTCATGTTCCTGGTGTTTGACCTGATGCGGAAGGGAGAGCTGTTTGACTATCTCACAGAGAAGGTGG  370
                      |||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.||||
Sbjct    1  ----------ATGTTCCTGGTGTTTGACCTGATGCGGAAAGGAGAGCTGTTTGACTATCTCACCGAGAAAGTGG  64

Query  371  CCCTCTCTGAAAAGGAAACCAGGTCCATCATGCGGTCTCTGCTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC  444
            |||||||.||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||
Sbjct   65  CCCTCTCAGAAAAGGAAACCAGGTCCATCATGAGGTCTCTACTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC  138

Query  445  ATTGTGCATCGAGATCTGAAGCCCGAGAATATTCTCCTAGATGACAATATGCAGATCCGACTTTCAGATTTCGG  518
            |||||.||||||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct  139  ATTGTACATCGAGACCTGAAGCCTGAGAATATTCTCCTAGATGACAATATGCAGATACGCCTTTCAGATTTTGG  212

Query  519  GTTCTCCTGCCACTTGGAACCTGGCGAGAAGCTTCGAGAGTTGTGTGGGACCCCAGGGTATCTAGCGCCAGAGA  592
            ||||||||||||.||||||.|||||||||||||||||||..||||.|||||.||||||||||||||.|||||||
Sbjct  213  GTTCTCCTGCCATTTGGAAGCTGGCGAGAAGCTTCGAGAACTGTGCGGGACTCCAGGGTATCTAGCACCAGAGA  286

Query  593  TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAGGTCGACCTCTGGGCCTGTGGGGTGATC  666
            ||||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||
Sbjct  287  TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAAGTTGATCTCTGGGCTTGTGGGGTGATC  360

Query  667  TTGTTCACACTCCTGGCTGGCTCGCCACCCTTCTGGCACCGGCGGCAGATCCTGATGTTACGCATGATCATGGA  740
            .||||||||||.|||||||||||.|||||.||||||||||||||.||.|||||||||.||||||||||||||||
Sbjct  361  CTGTTCACACTTCTGGCTGGCTCACCACCATTCTGGCACCGGCGCCAAATCCTGATGCTACGCATGATCATGGA  434

Query  741  GGGCCAGTACCAGTTCAGTTCCCCCGAGTGGGATGACCGTTCCAGCACTGTCAAAGACCTGATCTCCAGGCTGC  814
            .|||||.||.|||||.|.|||.||.|||||||||||.|||||.|.|||.|||||||||||||||||||.|||||
Sbjct  435  AGGCCAATATCAGTTTACTTCACCTGAGTGGGATGATCGTTCAAACACCGTCAAAGACCTGATCTCCAAGCTGC  508

Query  815  TGCAGGTGGATCCTGAGGCACGCCTGACAGCTGAGCAGGCCCTACAGCACCCCTTCTTTGAGCGTTGTGAAGGC  888
            ||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||||||
Sbjct  509  TGCAGGTGGATCCTGAAGCGCGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGC  582

Query  889  AGCCAACCCTGGAACCTCACCCCCCGCCAGCGGTTCCGGGTGGCAGTGTGGACAGTGCTGGCTGCTGGACGAGT  962
            ||||||||.|||||||||||.||.||||||||||||||||||||||||||||||.|.||||||||.||||||||
Sbjct  583  AGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGGTGGCAGTGTGGACAATACTGGCTGCCGGACGAGT  656

Query  963  GGCCCTAAGCACCCATCGTGTACGGCCACTGACCAAGAATGCACTGTTGAGGGACCCTTATGCGCTGCGGTCAG  1036
            ||||.||||||..||.|||.||||||||||.||.|||||||||||.|||||.|||||.|||||.||||||.|||
Sbjct  657  GGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATGCACTATTGAGAGACCCCTATGCACTGCGGCCAG  730

Query 1037  TGCGGCACCTCATCGACAACTGTGCCTTCCGGCTCTACGGGCACTGGGTAAAGAAAGGGGAGCAGCAGAACCGG  1110
            |.||||.||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||
Sbjct  731  TACGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGTGAGCAGCAGAACCGG  804

Query 1111  GCGGCTCTCTTTCAGCACCGGCCCCCTGGGCCTTTTCCCATCATGG--GCC-CTGAAGAGGAGGGAGACTCTGC  1181
            ||.||.|||||.|||||||.|||.|||.|| ||.|||||  |||.|  ||| |||||...||.||||||||.|.
Sbjct  805  GCAGCCCTCTTCCAGCACCAGCCTCCTAGG-CTGTTCCC--CATTGCTGCCACTGAACTCGAAGGAGACTCCGG  875

Query 1182  TGCTATAACTGAGGATGAGGCCGTGCTTGTGCTGGGCG  1219
            |||.||.||.|||||||||||....||.||.|.|.|| 
Sbjct  876  TGCCATCACAGAGGATGAGGCTACACTGGTACGGAGC-  912