Nucleotide Global Alignment
Description
- Query:
- TRCN0000489728
- Subject:
- NR_134919.2
- Aligned Length:
- 4772
- Identities:
- 1154
- Gaps:
- 3616
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTACAGCGGCGGCTGGGGCGGCAGGTGAGGCGGCTGGGGCGTTGCTGTCGTGCGTCCGCAGGCGTCAGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCAGACCCGAGGGCCGGGAAGGGATTTGGGTTTCACAGGAACCTGGGGCGGGGGTCCGCTATCTTGGGGCTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGACCGCTGCTTAAATTTGGCCCAGTCCAGACCTCGAGTCGGGCCCCCAGCCAGGCCCACGCCCAGGTCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCAGGCCGGTAGGGATCCTCTAGGGTCCCAGCTCGCCTCGATGGAGCTCCTCCCGCCGCTGCCTCAGTCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGTTGCTGCTGCTGTTGCCTGCCAAGCCCGCGGCGGGCGAGGACTGGCAGTGCCCGCGCACCCCCTACGCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCTCGCGACTTTGACGTGAAGTACGTGGTGCCCAGCTTCTCCGCCGGAGGCCTGGTACAGGCCATGGTGACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACGAGGGCGACAGAAATGAGAGTGCTGTGTTTGTAGCCATACGCAATCGCCTGCATGTGCTTGGGCCTGACCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCTGTCCAGAGCCTGGCCACGGGCCCTGCTGGAGACCCTGGCTGCCAGACGTGTGCAGCCTGTGGCCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACCCCACGGCCCTCCCGGTGACACAGACACAAAGGTGCTGGTGCTGGATCCCGCGCTGCCTGCGCTGGTCAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGTGGCTCCAGCCTGCAGGGCCGCTGCTTCCTGCATGACCTAGAGCCCCAAGGGACAGCCGTGCATCTGGCAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCAGCCTGCCTCTTCTCAGCCCACCATAACCGGCCCGATGACTGCCCCGACTGTGTGGCCAGCCCATTGGGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCGTGTAACTGTGGTTGAGCAAGGCCAGGCCTCCTATTTCTACGTGGCATCCTCACTGGACGCAGCCGTGGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCAGCTTCAGCCCACGCTCAGTGTCTATCAGGCGTCTCAAGGCTGACGCCTCGGGATTCGCACCGGGCTTTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCGTTGTCAGTGCTGCCCAAGCATCTTGTCTCCTACAGTATTGAATACGTGCACAGCTTCCACACGGGAGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCGTATACTTCCTGACTGTACAGCCGGCCAGCGTGACAGATGATCCTAGTGCCCTGCACACACGCCTGGCACGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTAGCGCCACTGAGCCAGAGTTGGGTGACTATCGGGAGCTGGTCCTCGACTGCAGATTTGCTCCAAAACGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCGCCGGGGGGCCCCAGAAGGCGGACAGCCCTACCCTGTGCTGCGGGTGGCCCACTCCGCTCCAGTGGGTGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACTTGCCACTGAGCTGAGCATCGCCGAGGGCCAGGAAGTACTATTTGGGGTCTTTGTGACTGGCAAGGATGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGTCCTGGCGTGGGCCCCAACTCTGTCGTCTGTGCCTTCCCCATTGACCTGCTGGACACACTAATTGATGAGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTGGAGCGCTGTTGTGAATCCCCAGTCCATCCAGGCCTCCGGCGAGGCCTCGACTTCTTCCAGTCGCCCAGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTGCCCCAACCCGCCTGGCCTGGAAGCCCTCAGCCCCAACACCAGCTGCCGCCACTTCCCTCTGCTGGTCAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCAGCTTCTCACGTGTGGACCTATTCAATGGGCTGTTGGGACCAGTACAGGTCACTGCATTGTATGTGACACG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTTGACAACGTCACAGTGGCACACATGGGCACAATGGATGGGCGTATCCTGCAGGTGGAGCTGGTCAGGTCAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAAACTACTTGCTGTATGTGTCCAACTTCTCACTGGGTGACAGTGGGCAGCCCGTGCAGCGGGATGTCAGTCGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTGGGGACCACCTACTCTTTGCCTCTGGGGACCAGGTTTTCCAGGTACCTATCCAAGGCCCTGGCTGCCGCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTCCTGACCTGTGGGCGTTGCCTAAGGGCATGGCATTTCATGGGCTGTGGCTGGTGTGGGAACATGTGCGGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTGCCCACCTAAGCTTACTGAGTTCCACCCCCACAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGACCTCTAAGGGGCAGTACAAGGCTGACCCTGTGTGGCTCCAACTTCTACCTTCACCCTTCTGGTCTGGTGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAGGGAACCCATCAGGTCACTGTGGGCCAAAGTCCCTGCCGGCCACTGCCCAAGGACAGCTCAAAACTCAGAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGTGCCCCGGAAAGACTTTGTAGAGGAGTTTGAGTGTGAACTGGAGCCCTTGGGCACCCAGGCAGTGGGGCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCAACGTCAGCCTCACCGTGACTAACATGCCACCGGGCAAGCACTTCCGGGTAGACGGCACCTCCGTGCTGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGCTTCTCTTTCATGGAGCCAGTGCTGATAGCAGTGCAACCCCTCTTTGGCCCACGGGCAGGAGGCACCTGTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCACTCTTGAAGGCCAGAGTCTGTCTGTAGGCACCAGCCGGGCTGTGCTGGTCAATGGGACTGAGTGTCTGCTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCACGGGTCAGTGAGGGGCAGCTTTTATGTGCCACACCCCCTGGGGCCACGGTGGCCAGTGTCCCCCTTAGCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCAGGTGGGGGGTGCCCAGGTACCTGGTTCCTGGACCTTCCAGTACAGAGAAGACCCTGTCGTGCTAAGCATCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCCCCAACTGTGGCTACATCAACTCCCACATCACCATCTGTGGCCAGCATCTAACTTCAGCATGGCACTTAGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTGTCATTCCATGACGGGCTTAGGGCAGTGGAAAGCAGGTGTGAGAGGCAGCTTCCAGAGCAGCAGCTGTGCCG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCTTCCTGAATATGTGGTCCGAGACCCCCAGGGATGGGTGGCAGGGAATCTGAGTGCCCGAGGGGATGGAGCTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTGGCTTTACACTGCCTGGCTTTCGCTTCCTACCCCCACCCCATCCACCCAGTGCCAACCTAGTTCCACTGAAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCTGAGGAGCATGCCATTAAGTTTGAGTATATTGGGCTGGGCGCTGTGGCTGACTGTGTGGGTATCAACGTGAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGTGGGTGGTGAGAGCTGCCAGCACGAGTTCCGGGGGGACATGGTTGTCTGCCCCCTGCCCCCATCCCTGCAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTGGCCAGGATGGTGCCCCATTGCAGGTCTGCGTAGATGGTGAATGTCATATCCTGGGTAGAGTGGTGCGGCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGGCCAGATGGGGTCCCACAGAGCACGCTCCTTGGTATCCTGCTGCCTTTGCTGCTGCTTGTGGCTGCACTGGC 3182
Query 1 --------------------------------------------------------------ATGACCTGGCAT 12
||||||||||||
Sbjct 3183 GACTGCACTGGTCTTCAGCTACTGGTGGCGGAGGAAGCAGCTAGTTCTTCCTCCCAACCTGAATGACCTGGCAT 3256
Query 13 CCCTGGACCAGACTGCTGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCA 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CCCTGGACCAGACTGCTGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCA 3330
Query 87 CTCCCTGCCATTGATGGTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATC 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CTCCCTGCCATTGATGGTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATC 3404
Query 161 CTGTGTGCCACTGCTGCGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGG 234
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CTGTGTGCCACTGCTGCGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTG--------- 3469
Query 235 ATGTGCTGATTCCCCATGAGCGGGTGGTCACCCACAGTGACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTC 308
|||||||||||||||||||
Sbjct 3470 -------------------------------------------------------AGGCCACTTTGGAGTTGTC 3488
Query 309 TACCACGGAGAATACATAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGAATCACAGA 382
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 3489 TACCACGGAGAATACATAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGCATCACAGA 3562
Query 383 GATGCAGCAGGTGGAGGCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTC 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3563 GATGCAGCAGGTGGAGGCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTC 3636
Query 457 TCATTGGTATCATGTTGCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTC 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3637 TCATTGGTATCATGTTGCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTC 3710
Query 531 CAGTTCATCCGCTCACCTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGG 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3711 CAGTTCATCCGCTCACCTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGG 3784
Query 605 CATGGAGTACCTGGCAGAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCAT 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3785 CATGGAGTACCTGGCAGAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCAT 3858
Query 679 TCACAGTCAAGGTGGCTGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCAT 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3859 TCACAGTCAAGGTGGCTGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCAT 3932
Query 753 CGCCACGCTCGCCTACCTGTGAAGTGGATGGCGCTGGAGAGCCTGCAGACCTATAGATTTACCACCAAGTCTGA 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3933 CGCCACGCTCGCCTACCTGTGAAGTGGATGGCGCTGGAGAGCCTGCAGACCTATAGATTTACCACCAAGTCTGA 4006
Query 827 TGTGTGGTCATTTGGTGTGCTGCTGTGGGAACTGCTGACACGGGGTGCCCCACCATACCGCCACATTGACCCTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4007 TGTGTGGTCATTTGGTGTGCTGCTGTGGGAACTGCTGACACGGGGTGCCCCACCATACCGCCACATTGACCCTT 4080
Query 901 TTGACCTTACCCACTTCCTGGCCCAGGGTCGGCGCCTGCCCCAGCCTGAGTATTGCCCTGATTCTCTGTACCAA 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4081 TTGACCTTACCCACTTCCTGGCCCAGGGTCGGCGCCTGCCCCAGCCTGAGTATTGCCCTGATTCTCTGTACCAA 4154
Query 975 GTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGACCCACCTTCGGAGTACTAGTGGGGGAGGTGGAGCA 1048
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 4155 GTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGACCCACCTTCAGAGTACTAGTGGGGGAGGTGGAGCA 4228
Query 1049 GATAGTGTCTGCACTGCTTGGGGACCATTATGTGCAGCTGCCAGCAACCTACATGAACTTGGGCCCCAGCACCT 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4229 GATAGTGTCTGCACTGCTTGGGGACCATTATGTGCAGCTGCCAGCAACCTACATGAACTTGGGCCCCAGCACCT 4302
Query 1123 CGCATGAGATGAATGTGCGTCCAGAACAGCCGCAGTTCTCACCCATGCCAGGGAATGTACGCCGGCCCCGGCCA 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4303 CGCATGAGATGAATGTGCGTCCAGAACAGCCGCAGTTCTCACCCATGCCAGGGAATGTACGCCGGCCCCGGCCA 4376
Query 1197 CTCTCAGAGCCTCCTCGGCCCACT-------------------------------------------------- 1220
||||||||||||||||||||||||
Sbjct 4377 CTCTCAGAGCCTCCTCGGCCCACTTGACTTAGTTCTTGGGCTGGACCTGCTTAGCTGCCTTGAGCTAACCCCAA 4450
Query 1221 -------------------------------------------------------------------------- 1220
Sbjct 4451 GCTGCCTCTGGGCCATGCCAGGCCAGAGGGCAGTGGCCCTCCACCTTGTTCCTGCCCTTTAACTTTCAGAGGCA 4524
Query 1221 -------------------------------------------------------------------------- 1220
Sbjct 4525 ATAGGTAAATGGGGCCCATTAGGTCCCTCACTCCACAGAGTGAGCCAGTGAGGGCAGTCCTGCAACATGTATTT 4598
Query 1221 -------------------------------------------------------------------------- 1220
Sbjct 4599 ATGGAGTGCCTGCTGTGGACCCTGTCTTCTGGGCACAGTGGACTCAGCAGTGACCACACCAACACTGACCCTTG 4672
Query 1221 ------------------------------------ 1220
Sbjct 4673 AACCAATAAAGGAACAAATGACTATTAAAGCACAAA 4708
