Nucleotide Global Alignment
Description
- Query:
- TRCN0000489728
- Subject:
- XM_011533742.2
- Aligned Length:
- 4203
- Identities:
- 987
- Gaps:
- 3214
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCTCCTCCCGCCGCTGCCTCAGTCCTTCCTGTTGCTGCTGCTGTTGCCTGCCAAGCCCGCGGCGGGCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGACTGGCAGTGCCCGCGCACCCCCTACGCGGCCTCTCGCGACTTTGACGTGAAGTACGTGGTGCCCAGCTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCGGAGGCCTGGTACAGGCCATGGTGACCTACGAGGGCGACAGAAATGAGAGTGCTGTGTTTGTAGCCATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCAATCGCCTGCATGTGCTTGGGCCTGACCTGAAGTCTGTCCAGAGCCTGGCCACGGGCCCTGCTGGAGACCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGCTGCCAGACGTGTGCAGCCTGTGGCCCAGGACCCCACGGCCCTCCCGGTGACACAGACACAAAGGTGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTGGATCCCGCGCTGCCTGCGCTGGTCAGTTGTGGCTCCAGCCTGCAGGGCCGCTGCTTCCTGCATGACCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGCCCCAAGGGACAGCCGTGCATCTGGCAGCGCCAGCCTGCCTCTTCTCAGCCCACCATAACCGGCCCGATGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCCCCGACTGTGTGGCCAGCCCATTGGGCACCCGTGTAACTGTGGTTGAGCAAGGCCAGGCCTCCTATTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACGTGGCATCCTCACTGGACGCAGCCGTGGCTGCCAGCTTCAGCCCACGCTCAGTGTCTATCAGGCGTCTCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTGACGCCTCGGGATTCGCACCGGGCTTTGTGGCGTTGTCAGTGCTGCCCAAGCATCTTGTCTCCTACAGTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAATACGTGCACAGCTTCCACACGGGAGCCTTCGTATACTTCCTGACTGTACAGCCGGCCAGCGTGACAGATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCCTAGTGCCCTGCACACACGCCTGGCACGGCTTAGCGCCACTGAGCCAGAGTTGGGTGACTATCGGGAGCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCCTCGACTGCAGATTTGCTCCAAAACGCAGGCGCCGGGGGGCCCCAGAAGGCGGACAGCCCTACCCTGTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGGGTGGCCCACTCCGCTCCAGTGGGTGCCCAACTTGCCACTGAGCTGAGCATCGCCGAGGGCCAGGAAGTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TATTTGGGGTCTTTGTGACTGGCAAGGATGGTGGTCCTGGCGTGGGCCCCAACTCTGTCGTCTGTGCCTTCCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTGACCTGCTGGACACACTAATTGATGAGGGTGTGGAGCGCTGTTGTGAATCCCCAGTCCATCCAGGCCTCCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCGAGGCCTCGACTTCTTCCAGTCGCCCAGTTTTTGCCCCAACCCGCCTGGCCTGGAAGCCCTCAGCCCCAACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGCTGCCGCCACTTCCCTCTGCTGGTCAGTAGCAGCTTCTCACGTGTGGACCTATTCAATGGGCTGTTGGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAGTACAGGTCACTGCATTGTATGTGACACGCCTTGACAACGTCACAGTGGCACACATGGGCACAATGGATGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCGTATCCTGCAGGTGGAGCTGGTCAGGTCACTAAACTACTTGCTGTATGTGTCCAACTTCTCACTGGGTGACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGGCAGCCCGTGCAGCGGGATGTCAGTCGTCTTGGGGACCACCTACTCTTTGCCTCTGGGGACCAGGTTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGGTACCTATCCAAGGCCCTGGCTGCCGCCACTTCCTGACCTGTGGGCGTTGCCTAAGGGCATGGCATTTCAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGCTGTGGCTGGTGTGGGAACATGTGCGGCCAGCAGAAGGAGTGTCCTGGCTCCTGGCAACAGGACCACTGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CACCTAAGCTTACTGAGTTCCACCCCCACAGTGGACCTCTAAGGGGCAGTACAAGGCTGACCCTGTGTGGCTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AACTTCTACCTTCACCCTTCTGGTCTGGTGCCTGAGGGAACCCATCAGGTCACTGTGGGCCAAAGTCCCTGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCACTGCCCAAGGACAGCTCAAAACTCAGACCAGTGCCCCGGAAAGACTTTGTAGAGGAGTTTGAGTGTGAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGAGCCCTTGGGCACCCAGGCAGTGGGGCCTACCAACGTCAGCCTCACCGTGACTAACATGCCACCGGGCAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACTTCCGGGTAGACGGCACCTCCGTGCTGAGAGGCTTCTCTTTCATGGAGCCAGTGCTGATAGCAGTGCAACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTCTTTGGCCCACGGGCAGGAGGCACCTGTCTCACTCTTGAAGGCCAGAGTCTGTCTGTAGGCACCAGCCGGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGTGCTGGTCAATGGGACTGAGTGTCTGCTAGCACGGGTCAGTGAGGGGCAGCTTTTATGTGCCACACCCCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGGCCACGGTGGCCAGTGTCCCCCTTAGCCTGCAGGTGGGGGGTGCCCAGGTACCTGGTTCCTGGACCTTCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTACAGAGAAGACCCTGTCGTGCTAAGCATCAGCCCCAACTGTGGCTACATCAACTCCCACATCACCATCTGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCAGCATCTAACTTCAGCATGGCACTTAGTGCTGTCATTCCATGACGGGCTTAGGGCAGTGGAAAGCAGGCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTGAGAGGCAGCTTCCAGAGCAGCAGCTGTGCCGCCTTCCTGAATATGTGGTCCGAGACCCCCAGGGATGGGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGCAGGGAATCTGAGTGCCCGAGGGGATGGAGCTGCTGGCTTTACACTGCCTGGCTTTCGCTTCCTACCCCCAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCATCCACCCAGTGCCAACCTAGTTCCACTGAAGCCTGAGGAGCATGCCATTAAGTTTGAGTATATTGGGCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGCGCTGTGGCTGACTGTGTGGGTATCAACGTGACCGTGGGTGGTGAGAGCTGCCAGCACGAGTTCCGGGGGGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATGGTTGTCTGCCCCCTGCCCCCATCCCTGCAGCTTGGCCAGGATGGTGCCCCATTGCAGGTCTGCGTAGATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTGAATGTCATATCCTGGGTAGAGTGGTGCGGCCAGGGCCAGATGGGGTCCCACAGAGCACGCTCCTTGGTATC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGCTGCCTTTGCTGCTGCTTGTGGCTGCACTGGCGACTGCACTGGTCTTCAGCTACTGGTGGCGGAGGAAGCA 2960
Query 1 -----------------------ATGACCTGGCATCCCTGGACCAGACTGCTGGAGCCACACCCCTGCCTATTC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCTAGTTCTTCCTCCCAACCTGAATGACCTGGCATCCCTGGACCAGACTGCTGGAGCCACACCCCTGCCTATTC 3034
Query 52 TGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATGGTCTGGATTCCACCACTTGTGTC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATGGTCTGGATTCCACCACTTGTGTC 3108
Query 126 CATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTGCGGAAAGAGTCCATCCAGCTAAG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTGCGGAAAGAGTCCATCCAGCTAAG 3182
Query 200 GGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGGATGTGCTGATTCCCCATGAGCGGGTGGTCACCCACAGTG 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGGATGTGCTGATTCCCCATGAGCGGGTGGTCACCCACAGTG 3256
Query 274 ACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTCTACCACGGAGAATACATAGACCAGGCCCAGAATCGAATC 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 ACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTCTACCACGGAGAATACATAGACCAGGCCCAGAATCGAATC 3330
Query 348 CAATGTGCCATCAAGTCACTAAGTCGAATCACAGAGATGCAGCAGGTGGAGGCCTTCCTGCGAGAGGGGCTGCT 421
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CAATGTGCCATCAAGTCACTAAGTCGCATCACAGAGATGCAGCAGGTGGAGGCCTTCCTGCGAGAGGGGCTGCT 3404
Query 422 CATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTTGCCACCTGAGGGCCTGCCCCATG 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTTGCCACCTGAGGGCCTGCCCCATG 3478
Query 496 TGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCACCTCAGCGGAACCCCACCGTGAAG 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCACCTCAGCGGAACCCCACCGTGAAG 3552
Query 570 GACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCAGAGCAGAAGTTTGTGCACAGGGA 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCAGAGCAGAAGTTTGTGCACAGGGA 3626
Query 644 CCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGCTGACTTTGGTTTGGCCCGCGACA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGCTGACTTTGGTTTGGCCCGCGACA 3700
Query 718 TCCTGGACAGGGAGTACTATAGTGTTCAACAGCATCGCCACGCTCGCCTACCTGTGAAGTGGATGGCGCTGGAG 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TCCTGGACAGGGAGTACTATAGTGTTCAACAGCATCGCCACGCTCGCCTACCTGTGAAGTGGATGGCGCTGGAG 3774
Query 792 AGCCTGCAGACCTATAGATTTACCACCAAGTCTGATGTGTGGTCATTTGGTGTGCTGCTGTGGGAACTGCTGAC 865
|||||||||||||||||||||||||||||||||||||||
Sbjct 3775 AGCCTGCAGACCTATAGATTTACCACCAAGTCTGATGTG----------------------------------- 3813
Query 866 ACGGGGTGCCCCACCATACCGCCACATTGACCCTTTTGACCTTACCCACTTCCTGGCCCAGGGTCGGCGCCTGC 939
Sbjct 3814 -------------------------------------------------------------------------- 3813
Query 940 CCCAGCCTGAGTATTGCCCTGATTCTCTGTACCAAGTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGA 1013
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3814 ----------------------------GTACCAAGTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGA 3859
Query 1014 CCCACCTTCGGAGTACTAGTGGGGGAGGTGGAGCAGATAGTGTCTGCACTGCTTGGGGACCATTATGTGCAGCT 1087
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3860 CCCACCTTCAGAGTACTAGTGGGGGAGGTGGAGCAGATAGTGTCTGCACTGCTTGGGGACCATTATGTGCAGCT 3933
Query 1088 GCCAGCAACCTACATGAACTTGGGCCCCAGCACCTCGCATGAGATGAATGTGCGTCCAGAACAGCCGCAGTTCT 1161
|||||||||||||||||||||||||||||||||||||||
Sbjct 3934 GCCAGCAACCTACATGAACTTGGGCCCCAGCACCTCGCA----------------------------------- 3972
Query 1162 CACCCATGCCAGGGAATGTACGCCGGCCCCGGCCACTCTCAGAGCCTCCTCGGCCCACT 1220
Sbjct 3973 ----------------------------------------------------------- 3972
