Nucleotide Global Alignment
Description
- Query:
- TRCN0000489728
- Subject:
- XR_001740155.1
- Aligned Length:
- 4321
- Identities:
- 1053
- Gaps:
- 3266
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTAGGGTCCCAGCTCGCCTCGATGGAGCTCCTCCCGCCGCTGCCTCAGTCCTTCCTGTTGCTGCTGCTGTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCCAAGCCCGCGGCGGGCGAGGACTGGCAGTGCCCGCGCACCCCCTACGCGGCCTCTCGCGACTTTGACGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGTACGTGGTGCCCAGCTTCTCCGCCGGAGGCCTGGTACAGGCCATGGTGACCTACGAGGGCGACAGAAATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGTGCTGTGTTTGTAGCCATACGCAATCGCCTGCATGTGCTTGGGCCTGACCTGAAGTCTGTCCAGAGCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCACGGGCCCTGCTGGAGACCCTGGCTGCCAGACGTGTGCAGCCTGTGGCCCAGGACCCCACGGCCCTCCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACACAGACACAAAGGTGCTGGTGCTGGATCCCGCGCTGCCTGCGCTGGTCAGTTGTGGCTCCAGCCTGCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCTGCTTCCTGCATGACCTAGAGCCCCAAGGGACAGCCGTGCATCTGGCAGCGCCAGCCTGCCTCTTCTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCACCATAACCGGCCCGATGACTGCCCCGACTGTGTGGCCAGCCCATTGGGCACCCGTGTAACTGTGGTTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAAGGCCAGGCCTCCTATTTCTACGTGGCATCCTCACTGGACGCAGCCGTGGCTGCCAGCTTCAGCCCACGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGTGTCTATCAGGCGTCTCAAGGCTGACGCCTCGGGATTCGCACCGGGCTTTGTGGCGTTGTCAGTGCTGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCATCTTGTCTCCTACAGTATTGAATACGTGCACAGCTTCCACACGGGAGCCTTCGTATACTTCCTGACTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGCCGGCCAGCGTGACAGATGATCCTAGTGCCCTGCACACACGCCTGGCACGGCTTAGCGCCACTGAGCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTTGGGTGACTATCGGGAGCTGGTCCTCGACTGCAGATTTGCTCCAAAACGCAGGCGCCGGGGGGCCCCAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCGGACAGCCCTACCCTGTGCTGCGGGTGGCCCACTCCGCTCCAGTGGGTGCCCAACTTGCCACTGAGCTGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCGCCGAGGGCCAGGAAGTACTATTTGGGGTCTTTGTGACTGGCAAGGATGGTGGTCCTGGCGTGGGCCCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTCTGTCGTCTGTGCCTTCCCCATTGACCTGCTGGACACACTAATTGATGAGGGTGTGGAGCGCTGTTGTGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCCAGTCCATCCAGGCCTCCGGCGAGGCCTCGACTTCTTCCAGTCGCCCAGTTTTTGCCCCAACCCGCCTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGAAGCCCTCAGCCCCAACACCAGCTGCCGCCACTTCCCTCTGCTGGTCAGTAGCAGCTTCTCACGTGTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCTATTCAATGGGCTGTTGGGACCAGTACAGGTCACTGCATTGTATGTGACACGCCTTGACAACGTCACAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACACATGGGCACAATGGATGGGCGTATCCTGCAGGTGGAGCTGGTCAGGTCACTAAACTACTTGCTGTATGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTCCAACTTCTCACTGGGTGACAGTGGGCAGCCCGTGCAGCGGGATGTCAGTCGTCTTGGGGACCACCTACTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGCCTCTGGGGACCAGGTTTTCCAGGTACCTATCCAAGGCCCTGGCTGCCGCCACTTCCTGACCTGTGGGCGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCCTAAGGGCATGGCATTTCATGGGCTGTGGCTGGTGTGGGAACATGTGCGGCCAGCAGAAGGAGTGTCCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCTGGCAACAGGACCACTGCCCACCTAAGCTTACTGAGTTCCACCCCCACAGTGGACCTCTAAGGGGCAGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAAGGCTGACCCTGTGTGGCTCCAACTTCTACCTTCACCCTTCTGGTCTGGTGCCTGAGGGAACCCATCAGGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGTGGGCCAAAGTCCCTGCCGGCCACTGCCCAAGGACAGCTCAAAACTCAGACCAGTGCCCCGGAAAGACTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGTAGAGGAGTTTGAGTGTGAACTGGAGCCCTTGGGCACCCAGGCAGTGGGGCCTACCAACGTCAGCCTCACCG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGACTAACATGCCACCGGGCAAGCACTTCCGGGTAGACGGCACCTCCGTGCTGAGAGGCTTCTCTTTCATGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCAGTGCTGATAGCAGTGCAACCCCTCTTTGGCCCACGGGCAGGAGGCACCTGTCTCACTCTTGAAGGCCAGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTGTCTGTAGGCACCAGCCGGGCTGTGCTGGTCAATGGGACTGAGTGTCTGCTAGCACGGGTCAGTGAGGGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCTTTTATGTGCCACACCCCCTGGGGCCACGGTGGCCAGTGTCCCCCTTAGCCTGCAGGTGGGGGGTGCCCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTACCTGGTTCCTGGACCTTCCAGTACAGAGAAGACCCTGTCGTGCTAAGCATCAGCCCCAACTGTGGCTACAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAACTCCCACATCACCATCTGTGGCCAGCATCTAACTTCAGCATGGCACTTAGTGCTGTCATTCCATGACGGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAGGGCAGTGGAAAGCAGGCAGTGTGAGAGGCAGCTTCCAGAGCAGCAGCTGTGCCGCCTTCCTGAATATGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCCGAGACCCCCAGGGATGGGTGGCAGGGAATCTGAGTGCCCGAGGGGATGGAGCTGCTGGCTTTACACTGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGCTTTCGCTTCCTACCCCCACCCCATCCACCCAGTGCCAACCTAGTTCCACTGAAGCCTGAGGAGCATGCCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTAAGTTTGAGTATATTGGGCTGGGCGCTGTGGCTGACTGTGTGGGTATCAACGTGACCGTGGGTGGTGAGAGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCAGCACGAGTTCCGGGGGGACATGGTTGTCTGCCCCCTGCCCCCATCCCTGCAGCTTGGCCAGGATGGTGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCCATTGCAGGTCTGCGTAGATGGTGAATGTCATATCCTGGGTAGAGTGGTGCGGCCAGGGCCAGATGGGGTCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CACAGAGCACGCTCCTTGGTATCCTGCTGCCTTTGCTGCTGCTTGTGGCTGCACTGGCGACTGCACTGGTCTTC 2960
Query 1 ----------------------------------------------ATGACCTGGCATCCCTGGACCAGACTGC 28
||||||||||||||||||||||||||||
Sbjct 2961 AGCTACTGGTGGCGGAGGAAGCAGCTAGTTCTTCCTCCCAACCTGAATGACCTGGCATCCCTGGACCAGACTGC 3034
Query 29 TGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATG 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATG 3108
Query 103 GTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTG 3182
Query 177 CGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGGATGTGCTGATTCCCCA 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGGATGTGCTGATTCCCCA 3256
Query 251 TGAGCGGGTGGTCACCCACAGTGACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTCTACCACGGAGAATACA 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 TGAGCGGGTGGTCACCCACAGTGACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTCTACCACGGAGAATACA 3330
Query 325 TAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGAATCACAGAGATGCAGCAGGTGGAG 398
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 3331 TAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGCATCACAGAGATGCAGCAGGTGGAG 3404
Query 399 GCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTT 3478
Query 473 GCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCAC 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCAC 3552
Query 547 CTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 CTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCA 3626
Query 621 GAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGC 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGC 3700
Query 695 TGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCATCGCCACGCTCGCCTAC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCATCGCCACGCTCGCCTAC 3774
Query 769 CTGTGAAGTGGATGGCGCTGGAGAGCCTGCAGACCTATAGATTTACCACCAAGTCTGATGTGTGGTCATTTGGT 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 CTGTGAAGTGGATGGCGCTGGAGAGCCTGCAGACCTATAGATTTACCACCAAGTCTGATGTGTGGTCATTTGGT 3848
Query 843 GTGCTGCTGTGGGAACTGCTGACACGGGGTGCCCCACCATACCGCCACATTGACCCTTTTGACCTTACCCACTT 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 GTGCTGCTGTGGGAACTGCTGACACGGGGTGCCCCACCATACCGCCACATTGACCCTTTTGACCTTACCCACTT 3922
Query 917 CCTGGCCCAGGGTCGGCGCCTGCCCCAGCCTGAGTATTGCCCTGATTCTCT----------------------- 967
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CCTGGCCCAGGGTCGGCGCCTGCCCCAGCCTGAGTATTGCCCTGATTCTCTGAAAGGGACTCTCGCTGGGCCTC 3996
Query 968 ------------------------------------------------------------------------GT 969
||
Sbjct 3997 AATTTCCTCATCTGTGAACTGGTCCCACCCTCATGCAGAGTAGGACCCTGGGAGGACCTCACAGTTGCCATGGT 4070
Query 970 ACCAAGTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGACCCACCTTCGGAGTACTAGTGGGGGAGGTG 1043
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 4071 ACCAAGTGATGCAGCAATGCTGGGAGGCAGACCCAGCAGTGCGACCCACCTTCAGAGTACTAGTGGGGGAGGTG 4144
Query 1044 GAGCAGATAGTGTCTGCACTGCTTGGGGACCATTATGTGCAGCTGCCAGCAACCTACATGAACTTGGGCCCCAG 1117
||||||||||||
Sbjct 4145 GAGCAGATAGTG-------------------------------------------------------------- 4156
Query 1118 CACCTCGCATGAGATGAATGTGCGTCCAGAACAGCCGCAGTTCTCACCCATGCCAGGGAATGTACGCCGGCCCC 1191
Sbjct 4157 -------------------------------------------------------------------------- 4156
Query 1192 GGCCACTCTCAGAGCCTCCTCGGCCCACT 1220
Sbjct 4157 ----------------------------- 4156
