Nucleotide Global Alignment
Description
- Query:
- TRCN0000489728
- Subject:
- XR_940428.2
- Aligned Length:
- 4226
- Identities:
- 688
- Gaps:
- 3537
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTAGGGTCCCAGCTCGCCTCGATGGAGCTCCTCCCGCCGCTGCCTCAGTCCTTCCTGTTGCTGCTGCTGTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCCAAGCCCGCGGCGGGCGAGGACTGGCAGTGCCCGCGCACCCCCTACGCGGCCTCTCGCGACTTTGACGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGTACGTGGTGCCCAGCTTCTCCGCCGGAGGCCTGGTACAGGCCATGGTGACCTACGAGGGCGACAGAAATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGTGCTGTGTTTGTAGCCATACGCAATCGCCTGCATGTGCTTGGGCCTGACCTGAAGTCTGTCCAGAGCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCACGGGCCCTGCTGGAGACCCTGGCTGCCAGACGTGTGCAGCCTGTGGCCCAGGACCCCACGGCCCTCCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGACACAGACACAAAGGTGCTGGTGCTGGATCCCGCGCTGCCTGCGCTGGTCAGTTGTGGCTCCAGCCTGCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCTGCTTCCTGCATGACCTAGAGCCCCAAGGGACAGCCGTGCATCTGGCAGCGCCAGCCTGCCTCTTCTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCACCATAACCGGCCCGATGACTGCCCCGACTGTGTGGCCAGCCCATTGGGCACCCGTGTAACTGTGGTTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAAGGCCAGGCCTCCTATTTCTACGTGGCATCCTCACTGGACGCAGCCGTGGCTGCCAGCTTCAGCCCACGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGTGTCTATCAGGCGTCTCAAGGCTGACGCCTCGGGATTCGCACCGGGCTTTGTGGCGTTGTCAGTGCTGCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCATCTTGTCTCCTACAGTATTGAATACGTGCACAGCTTCCACACGGGAGCCTTCGTATACTTCCTGACTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGCCGGCCAGCGTGACAGATGATCCTAGTGCCCTGCACACACGCCTGGCACGGCTTAGCGCCACTGAGCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTTGGGTGACTATCGGGAGCTGGTCCTCGACTGCAGATTTGCTCCAAAACGCAGGCGCCGGGGGGCCCCAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCGGACAGCCCTACCCTGTGCTGCGGGTGGCCCACTCCGCTCCAGTGGGTGCCCAACTTGCCACTGAGCTGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCGCCGAGGGCCAGGAAGTACTATTTGGGGTCTTTGTGACTGGCAAGGATGGTGGTCCTGGCGTGGGCCCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTCTGTCGTCTGTGCCTTCCCCATTGACCTGCTGGACACACTAATTGATGAGGGTGTGGAGCGCTGTTGTGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCCAGTCCATCCAGGCCTCCGGCGAGGCCTCGACTTCTTCCAGTCGCCCAGTTTTTGCCCCAACCCGCCTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGAAGCCCTCAGCCCCAACACCAGCTGCCGCCACTTCCCTCTGCTGGTCAGTAGCAGCTTCTCACGTGTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCTATTCAATGGGCTGTTGGGACCAGTACAGGTCACTGCATTGTATGTGACACGCCTTGACAACGTCACAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACACATGGGCACAATGGATGGGCGTATCCTGCAGGTGGAGCTGGTCAGGTCACTAAACTACTTGCTGTATGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTCCAACTTCTCACTGGGTGACAGTGGGCAGCCCGTGCAGCGGGATGTCAGTCGTCTTGGGGACCACCTACTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGCCTCTGGGGACCAGGTTTTCCAGGTACCTATCCAAGGCCCTGGCTGCCGCCACTTCCTGACCTGTGGGCGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCCTAAGGGCATGGCATTTCATGGGCTGTGGCTGGTGTGGGAACATGTGCGGCCAGCAGAAGGAGTGTCCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCTGGCAACAGGACCACTGCCCACCTAAGCTTACTGAGTTCCACCCCCACAGTGGACCTCTAAGGGGCAGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAAGGCTGACCCTGTGTGGCTCCAACTTCTACCTTCACCCTTCTGGTCTGGTGCCTGAGGGAACCCATCAGGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGTGGGCCAAAGTCCCTGCCGGCCACTGCCCAAGGACAGCTCAAAACTCAGACCAGTGCCCCGGAAAGACTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGTAGAGGAGTTTGAGTGTGAACTGGAGCCCTTGGGCACCCAGGCAGTGGGGCCTACCAACGTCAGCCTCACCG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGACTAACATGCCACCGGGCAAGCACTTCCGGGTAGACGGCACCTCCGTGCTGAGAGGCTTCTCTTTCATGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCAGTGCTGATAGCAGTGCAACCCCTCTTTGGCCCACGGGCAGGAGGCACCTGTCTCACTCTTGAAGGCCAGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTGTCTGTAGGCACCAGCCGGGCTGTGCTGGTCAATGGGACTGAGTGTCTGCTAGCACGGGTCAGTGAGGGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCTTTTATGTGCCACACCCCCTGGGGCCACGGTGGCCAGTGTCCCCCTTAGCCTGCAGGTGGGGGGTGCCCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTACCTGGTTCCTGGACCTTCCAGTACAGAGAAGACCCTGTCGTGCTAAGCATCAGCCCCAACTGTGGCTACAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAACTCCCACATCACCATCTGTGGCCAGCATCTAACTTCAGCATGGCACTTAGTGCTGTCATTCCATGACGGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAGGGCAGTGGAAAGCAGGCAGTGTGAGAGGCAGCTTCCAGAGCAGCAGCTGTGCCGCCTTCCTGAATATGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCCGAGACCCCCAGGGATGGGTGGCAGGGAATCTGAGTGCCCGAGGGGATGGAGCTGCTGGCTTTACACTGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGCTTTCGCTTCCTACCCCCACCCCATCCACCCAGTGCCAACCTAGTTCCACTGAAGCCTGAGGAGCATGCCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTAAGTTTGAGTATATTGGGCTGGGCGCTGTGGCTGACTGTGTGGGTATCAACGTGACCGTGGGTGGTGAGAGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCAGCACGAGTTCCGGGGGGACATGGTTGTCTGCCCCCTGCCCCCATCCCTGCAGCTTGGCCAGGATGGTGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCCATTGCAGGTCTGCGTAGATGGTGAATGTCATATCCTGGGTAGAGTGGTGCGGCCAGGGCCAGATGGGGTCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CACAGAGCACGCTCCTTGGTATCCTGCTGCCTTTGCTGCTGCTTGTGGCTGCACTGGCGACTGCACTGGTCTTC 2960
Query 1 ----------------------------------------------ATGACCTGGCATCCCTGGACCAGACTGC 28
||||||||||||||||||||||||||||
Sbjct 2961 AGCTACTGGTGGCGGAGGAAGCAGCTAGTTCTTCCTCCCAACCTGAATGACCTGGCATCCCTGGACCAGACTGC 3034
Query 29 TGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATG 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TGGAGCCACACCCCTGCCTATTCTGTACTCGGGCTCTGACTACAGAAGTGGCCTTGCACTCCCTGCCATTGATG 3108
Query 103 GTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GTCTGGATTCCACCACTTGTGTCCATGGAGCATCCTTCTCCGATAGTGAAGATGAATCCTGTGTGCCACTGCTG 3182
Query 177 CGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTGAGGTCAAGGATGTGCTGATTCCCCA 250
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CGGAAAGAGTCCATCCAGCTAAGGGACCTGGACTCTGCGCTCTTGGCTG------------------------- 3231
Query 251 TGAGCGGGTGGTCACCCACAGTGACCGAGTCATTGGCAAAGGCCACTTTGGAGTTGTCTACCACGGAGAATACA 324
|||||||||||||||||||||||||||||||||||
Sbjct 3232 ---------------------------------------AGGCCACTTTGGAGTTGTCTACCACGGAGAATACA 3266
Query 325 TAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGAATCACAGAGATGCAGCAGGTGGAG 398
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 3267 TAGACCAGGCCCAGAATCGAATCCAATGTGCCATCAAGTCACTAAGTCGCATCACAGAGATGCAGCAGGTGGAG 3340
Query 399 GCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3341 GCCTTCCTGCGAGAGGGGCTGCTCATGCGTGGCCTGAACCACCCGAATGTGCTGGCTCTCATTGGTATCATGTT 3414
Query 473 GCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCAC 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3415 GCCACCTGAGGGCCTGCCCCATGTGCTGCTGCCCTATATGTGCCACGGTGACCTGCTCCAGTTCATCCGCTCAC 3488
Query 547 CTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3489 CTCAGCGGAACCCCACCGTGAAGGACCTCATCAGCTTTGGCCTGCAGGTAGCCCGCGGCATGGAGTACCTGGCA 3562
Query 621 GAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGC 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3563 GAGCAGAAGTTTGTGCACAGGGACCTGGCTGCGCGGAACTGCATGCTGGACGAGTCATTCACAGTCAAGGTGGC 3636
Query 695 TGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCATCGCCACGCTCGCCTAC 768
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3637 TGACTTTGGTTTGGCCCGCGACATCCTGGACAGGGAGTACTATAGTGTTCAACAGCATC--------------- 3695
Query 769 CTGTGAAGTGGATGGCGCTGGAGAGCCTGCAGACCTATAGATTTACCACCAAGTCTGATGTGTGGTCATTTGGT 842
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 843 GTGCTGCTGTGGGAACTGCTGACACGGGGTGCCCCACCATACCGCCACATTGACCCTTTTGACCTTACCCACTT 916
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 917 CCTGGCCCAGGGTCGGCGCCTGCCCCAGCCTGAGTATTGCCCTGATTCTCTGTACCAAGTGATGCAGCAATGCT 990
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 991 GGGAGGCAGACCCAGCAGTGCGACCCACCTTCGGAGTACTAGTGGGGGAGGTGGAGCAGATAGTGTCTGCACTG 1064
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 1065 CTTGGGGACCATTATGTGCAGCTGCCAGCAACCTACATGAACTTGGGCCCCAGCACCTCGCATGAGATGAATGT 1138
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 1139 GCGTCCAGAACAGCCGCAGTTCTCACCCATGCCAGGGAATGTACGCCGGCCCCGGCCACTCTCAGAGCCTCCTC 1212
Sbjct 3696 -------------------------------------------------------------------------- 3695
Query 1213 GGCCCACT 1220
Sbjct 3696 -------- 3695
