Nucleotide Global Alignment

Description

Query:
TRCN0000489759
Subject:
NR_131247.1
Aligned Length:
3736
Identities:
1637
Gaps:
1856

Alignment

Query    1  ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAG--GAAGCGAGTTG---CCC  69
                                               ||.| |.||||    |||||  .|.||.||  |   |||
Sbjct    1  -----------------------------------AGTA-GGATGG----GGAAGCTTAGGCCAG--GCCACCC  32

Query   70  GTGTG----TGCA-------AG---CTGCGGCCAGAGGATCT----ATGATG--GCCAGTACCTCCAGGCCCTG  123
            .||.|    |.||       ||   ||.|||.|||||   ||    |.||||  |||||  |||  .|||||||
Sbjct   33  ATGGGCTCCTCCAGACCTCCAGAGTCTCCGGACAGAG---CTGCAGAGGATGCAGCCAG--CCT--TGGCCCTG  99

Query  124  AACGCGGACTGGCACGCAGACT-------------GCTTCAGGTGTTGTGACTGCAGTGCCTCCCTGTCGCACC  184
            |     ||..|.|.|||.|.||             |||  |.|||.||.||.||.||.|.||||||.||.||||
Sbjct  100  A-----GAAGGACCCGCTGCCTCCACCTCCGTGGGGCT--AAGTGCTGCGAGTGTAGCGTCTCCCTTTCACACC  166

Query  185  AGTACTATGAGAAGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCCTGCCATGGG  258
            |||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct  167  AGTACTACGAGAAGGATGGACAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGG  240

Query  259  TGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCATCTG  332
            |||||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct  241  TGCTCCGAGCACATCACCAAAGGGCTGGTCATGGTGGCTGGGGAGCTGAAGTACCACCCTGAGTGTTTCATCTG  314

Query  333  CCTCACGTGTGGGACCTTTATCGGTGACGGGGACACCTACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGC  406
            ||||.|.|||||.|.|||.||.||.||.||||||||||||||.||||||||||||||||||||||||||.||.|
Sbjct  315  CCTCGCCTGTGGAAACTTCATTGGCGATGGGGACACCTACACACTGGTGGAGCACTCCAAGCTGTACTGTGGCC  388

Query  407  ACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTCCCCTGGCTCCCACCTGCCC  480
            |.||||||||||||||.|||||.||.||.||||||||.||||||||.||||||||.||.|||||||||||||||
Sbjct  389  AGTGCTACTACCAGACCGTGGTAACTCCAGTCATCGAACAGATCCTACCTGACTCACCCGGCTCCCACCTGCCC  462

Query  481  CACACCGTCACCCTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCCCC  554
            |||||.||||||||.|||||.|||||||||||..|.||||||||.||.||.||.||.||||||||.||||||||
Sbjct  463  CACACAGTCACCCTCGTGTCTATCCCAGCCTCTGCCCATGGCAAACGAGGCCTGTCTGTCTCCATCGACCCCCC  536

Query  555  GCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGGCTGCATGA  628
            .|||||||||||.||.||||||||.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||||
Sbjct  537  TCACGGCCCACCAGGATGTGGCACGGAGCATTCGCACACTGTCCGAGTCCAAGGAGTGGACCCAGGCTGCATGA  610

Query  629  GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTG  702
            ||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  611  GCCCAGATGTGAAGAATTCCATCCACGTTGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGGAATGTG  684

Query  703  CCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTCA  776
            ||.|||||||||||.|||.|||||||.|||||.||||||||||||||||||||||||||||||||.|||||.||
Sbjct  685  CCGCTGGACGAGATCGACTTGCTGATCCAGGAGACCAGCCGCCTGCTCCAGCTGACCCTCGAGCACGACCCCCA  758

Query  777  CGATACACTGGGCCACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAGG  850
            .||..||||||||||.||||..|.|.|.||..||||||||||||||||.||||...|.|||||||||||..|||
Sbjct  759  TGACTCACTGGGCCATGGGCCCGTGTCGGATCCCAGCCCCCTGAGCTCCCCGGTGCACACTCCCAGCGGACAGG  832

Query  851  CGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTG  924
            |.|.|||||||||||||||||||||||||||||||||||||||.||.||||.|||.|||||..|..|||||||.
Sbjct  833  CAGCCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGTATTGACACGTCCCCGGGTACCAGCTCACTA  906

Query  925  GGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCAT  998
            |.|||.||.|||||||||||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.||
Sbjct  907  GCCTCTCCAGCCTCCCAGCGCAAGGACCTGGGTCGCTCCGAATCCCTCCGAGTGGTCTGCCGACCACACCGAAT  980

Query  999  CTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGGCAAGGGCTGCTTCGGCCAGGCTATCAAGGTGACAC  1072
            |||||||||.||.||.||||||||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||
Sbjct  981  CTTCCGGCCATCTGATCTCATCCATGGGGAAGTGCTGGGCAAGGGCTGTTTTGGCCAGGCCATCAAGGTGACAC  1054

Query 1073  ACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGAGGAGACCCAGAGGACGTTCCTC  1146
            ||||.||.|||||.||||||||||||||||||||.||.||||||||.||.|||||||||||||||||.||||||
Sbjct 1055  ACCGAGAAACAGGCGAGGTGATGGTGATGAAGGAACTTATCCGGTTTGATGAGGAGACCCAGAGGACATTCCTC  1128

Query 1147  AAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCTCTACAAGGACAA  1220
            ||||||||.|||||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 1129  AAGGAGGTAAAGGTCATGCGCTGCCTGGAGCACCCTAACGTGCTCAAGTTCATCGGAGTGCTCTACAAGGACAA  1202

Query 1221  GAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGACAGCCAGT  1294
            |.||||.|||||||||||.||||||||||||||||||||.||.||||||||||||||||.|||     ||||||
Sbjct 1203  GCGGCTAAACTTCATCACAGAGTACATCAAGGGCGGCACCCTGCGGGGCATCATCAAGAACAT-----GCCAGT  1271

Query 1295  ACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGCCTACCTCCACTCCATGAACATC  1368
            ||||.|||||.|||||.||.|||||||||||||||||.|||||||||||||||||||||||.||.|||||||||
Sbjct 1272  ACCCGTGGAGTCAGAGGGTCAGCTTTGCCAAGGACATTGCATCAGGGATGGCCTACCTCCATTCGATGAACATC  1345

Query 1369  ATCCACCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGAG--------------------------------  1410
            |||||||||||||||||||||||||||||.||||||||.|||                                
Sbjct 1346  ATCCACCGAGACCTCAACTCCCACAACTGTCTGGTCCGTGAGGTGAGCAGTGGGGCCCAGCAGCACTGGGCAGC  1419

Query 1411  --------------------------------------------------------------------------  1410
                                                                                      
Sbjct 1420  CAGCTGTGCTGAAGGAAGAAGGGACCTAGGAGCTGCTCCTTTCAGGGCTTCCACTAGAGGTCAGGTGAAAAGTA  1493

Query 1411  --------------------------------------------------------------------------  1410
                                                                                      
Sbjct 1494  CCAAGGCAGACCAGGTTAGCCCTGGCTCTGCCGTTTATACCATGGCAGCAATCCTCAGACCAGCAGTGCAAGGG  1567

Query 1411  --------------------------------------------------------------------------  1410
                                                                                      
Sbjct 1568  TTTAACAGGTCAGAGAAGAGAAGACTGATTCAAAATGAAAAGCCCCACCTTTACTGCAGCCTTCACAGACACCA  1641

Query 1411  --------------------------------AACAA-------------------------------------  1415
                                            |||||                                     
Sbjct 1642  CCTGAGGTAGCCCAGGCTACCCAGGCAGCAGCAACAACTGCAACAGTGTGTGGGCAGGGGCATCTGGGCAGACT  1715

Query 1416  --------------------------------------------------------------------------  1415
                                                                                      
Sbjct 1716  TCTTGAATTGGAGACTTGGCAGAGGCATGTCCGTGGAGGCCAAGAGGATAAGAGGCAATCAGCCCCAAGTTTAC  1789

Query 1416  --------------------------------------------------------------------------  1415
                                                                                      
Sbjct 1790  AGGTCCCTAGTGTCCTCTAAGCCCTATCAGTCTGCCGAGGACACTGCACAGAAGATGGTACTATCTGCTGGGGC  1863

Query 1416  --------------------------------------------------------------------------  1415
                                                                                      
Sbjct 1864  TGCCCAGCAAGATAGAGAAACCAGGCTGTGGAACATCCTGAGGGTGACCCACAAAACTCGGAGCATTTGGTGGC  1937

Query 1416  -----------GAATGTGGTGGTGGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTGA  1478
                       |||.|||||||||||.|||||.||||||||.||.||||||.|.||.||.||||.||||.||||
Sbjct 1938  ATGAAAAATAGGAACGTGGTGGTGGCCGACTTTGGGCTGGCTCGACTCATGATCGATGAAAAGAATCAGTCTGA  2011

Query 1479  GGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACCGTGGTGGGCAACCCCTACTGGATGGCAC  1552
            .|.|.|.||.|||||.||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|
Sbjct 2012  AGACTTACGCAGCCTTAAGAAGCCGGACCGCAAGAAGCGGTACACAGTGGTGGGCAACCCCTACTGGATGGCGC  2085

Query 1553  CTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTCTCCTTTGGGATCGTCCTGTGCGAGATC  1626
            |.|||||||||||.||.||.||.||||||||.||||||||.|||||.||||||||.||.|||||.||.|||||.
Sbjct 2086  CAGAGATGATCAATGGTCGTAGTTATGATGAAAAGGTGGACGTGTTTTCCTTTGGAATTGTCCTCTGTGAGATT  2159

Query 1627  ATCGGGCGGGTGAACGCAGACCCTGACTACCTGCCCCGCACCATGGACTTTGGCCTCAACGTGCGAGGATTCCT  1700
            ||||||||.|||||.||||||||||||||.|||||||||||.|||||||||||||||||.||..|.||.|||||
Sbjct 2160  ATCGGGCGTGTGAATGCAGACCCTGACTATCTGCCCCGCACTATGGACTTTGGCCTCAATGTAAGGGGTTTCCT  2233

Query 1701  GGACCGCTACTGCCCCCCAAACTGCCCCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCGATCTGGACCCCG  1774
            ||||||||||||.||.||||||||.|||||.||.||||||||||||||.||||||||.||.||.|||||.||.|
Sbjct 2234  GGACCGCTACTGTCCACCAAACTGTCCCCCAAGTTTCTTCCCCATCACTGTGCGCTGCTGTGACCTGGATCCTG  2307

Query 1775  AGAAGAGGCCATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCTGCCA  1848
            |.|||||.||.||.|||||.|||||||||||.|||||.||.||.||.|||||||||.||.|.||.|||||||||
Sbjct 2308  AAAAGAGACCCTCTTTTGTAAAGCTGGAACAATGGCTAGAAACACTTCGCATGCACTTGTCTGGTCACCTGCCA  2381

Query 1849  CTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGC  1922
            |||||||||||.|||||.||.|||||..|.||.||||||||||||||||||||.|||||||||..|||||||||
Sbjct 2382  CTGGGCCCACAACTGGAACAACTGGAGCGGGGCTTCTGGGAGACCTACCGGCGGGGCGAGAGCTCACTGCCTGC  2455

Query 1923  CCACCCTGAGGTCCCCGAC-------------------------------------------------------  1941
            ||||||.||||||||.|||                                                       
Sbjct 2456  CCACCCCGAGGTCCCTGACTGAGCTCAGCGGGCCCCACCATCTGCATCCCTACCTTTGGAGACGATACCCTCAC  2529

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2530  CAGATTTCTCAGCAGGGGTGGCCTAGGCCTGGAGCCCTCAGCCAGGGCCGTGGTGCCCACACCCATCCCCCAGA  2603

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2604  CCCAGGCCCTGACCTGCCTTTTCCCCTCATGCAGGGTGCCCCCCAGCCTCTCTCTGCCTCTGGCCCCCAAGTCA  2677

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2678  CCAGGCTGCACACACACGTGGTCGGTCACATTGCCCTGCCTTACCTCCCAGGGGCCAACCCCTCACTGGTCTTG  2751

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2752  CATGAGCTAGAGGGTTGGGAAGCTGGGCTCATTCCACGCATTGCCTGCAGCCATCTGCACACTGCACCTGCTGG  2825

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2826  CAGCTCCTCCCCAGCAAGGCTGGGCTAGAAGGCAGCTTTAGAAGTGAGCCCCTCTAATGCCAAGGGAGCGGCTC  2899

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2900  TGTGCCCAGGAACCCAAGGGGAGGCTAGGATCCCCTTGGGGAAATCCAGGTAGCATCAGGTATTGACAGGGATC  2973

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2974  TGAATCCCAAAGCAGAGAGAGAGGTCCAACCCCGTGTGGCCAGGCAGTGGCCCCTCACTCTTGCTTAGTGTCCA  3047

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3048  TCTCATTTCTTGATCAAAGCCACTTTAGTGAGAAATAGGTACCAGTCCTCAGGACGAGCCAGGATCCCTCAGGG  3121

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3122  GAGAGGGCAGACGATGCCTGGGATCCAGCTGACAGGAGGGTCCAGCCCGCACTACAGAGGCTGGGCAGAGGGAA  3195

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3196  GGAGGCAGCCACCCACCAGCACCCCAGCCCTCCAGGGTCATCTCAGCACCCAGGCCTCTCCCCATGGCTGGGGC  3269

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3270  AGCCCCGCCCCCTCCCTGGGTGCATCTGCCCTCTGAGTTCTTTCTGTGTGATCTATTTTTTAAGAAGAGTTTGT  3343

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3344  ATTATTTTTTCATAACGGCTGCAGCAGCAGCTGCTGGGGGTTTAGGGGGATGGTTTTGTTTTGTTGTTTTGTTT  3417

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3418  TGGTTTAGGTGGGTGGGGGTGGGAGGGCCATGTCTTCACTCCGCTTCAGTTGACCATCTAGGGCATATTAAACT  3491

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3492  GTGAAGCTTTCCCAGTGCACTTTGAATATGGAAGAGAATTTGAGCAGACCCCCGCGGGACCAAGACTGAAAGAG  3565

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3566  GCAAGGTCTCCTTGCCTCGGCCCAGTGATCATGACAGGAATGAACCCAAACTCAGAACAATAAAATCAATTCTG  3639

Query 1942  ------------------------------------  1941
                                                
Sbjct 3640  TGCTCCCCACGCGGGGCTTGCAAAAAAAAAAAAAAA  3675

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