Nucleotide Global Alignment

Description

• Query: TRCN0000489771
• Subject: NM_001282440.1
• Aligned Length: 1199
• Identities: 812
• Gaps: 340

Alignment

Query    1  ATGTCCGGGGTGGTGCGGACCCTCAGCCGCTGCCTGCTGCCGGCCGAGGCCGGCGGGGC-CCGCGAGCGCAGGG  73
                                                                  ..||| ||.|||  ||||||
Sbjct    1  ------------------------------------------------------ATGGCTCCACGA--GCAGGG  18

Query   74  CGGGCAGCGGCGCGCGCGACGCGGAGCGCGAGGCCCGGAGGCGTAGTCGCGACATCGACGCGCTGCTGGCCCGC  147
                               |.||||||   .|||||          ||.|            |||||   .|| 
Sbjct   19  -------------------CTCGGAGC---TGGCCC----------TCTC------------CTGCT---TCG-  44

Query  148  GAGCGGCGCGCGGTCCGGCGCCTGGTGAAGATCCTGCTGCTGGGCGCG-GGCGAGAGCGGCAAGTCCACGTTCC  220
            ||||.||||                |||           |||||.|.| ||||                     
Sbjct   45  GAGCCGCGC----------------TGA-----------CTGGGTGTGTGGCG---------------------  70

Query  221  TCAAGCAGATGCGCATCATCCACGGCCGCGAGTTCGACCAGAAGGCGCTGCTGGAGTTCCGCGACACCATCTTC  294
                   ||||.|         .||||||        ||.||  |.|||                         
Sbjct   71  -------GATGGG---------AGGCCGC--------CCTGA--GTGCT-------------------------  93

Query  295  GACAACATCCTCAAGGGCTCAAGGGTTCTTGTTGATGCACGAGATA-AGCTTGGCATTCCTTGGCAGTATTCTG  367
                 |.|||||               |.|.|||          || |||.|||                 .||
Sbjct   94  -----CCTCCTC---------------CCTTTTG----------TACAGCCTGG-----------------GTG  120

Query  368  AAAATGAGAAGCATGGGATGTTCCTGATGGCCTTC----------GAGAACAAGGCGGGGCTG----CCTGTGG  427
            .|||           |||.|..||||.||..||||          |||.|||.|  |||.|||    |||.|||
Sbjct  121  GAAA-----------GGACGGGCCTGGTGCACTTCCTGCGGGAGGGAGGACATG--GGGCCTGCTTCCCTCTGG  181

Query  428  ---------AGCCGGCCA---------CCTTCCA---GCTGTA---------CGTCC--CGGCCCTGAGCGCAC  469
                     |.||||.||         |.|||||   |.|.||         |||||  |.||.|||.||    
Sbjct  182  CGCTCCTCCACCCGGGCAGCGTGGTTTCTTTCCAAATGATTTATCCTCTCATCGTCCTGCCGCTCTGTGC----  251

Query  470  TCTGGAGGGATTC-TGGCATCAGGGAGGCTTTCAGCCGGAGAAGCGAGTTTCAGCT------GGGGGAGTCGGT  536
                      ||| ||||||..|||    |.|.|.||||| |.|.||.|.||  ||      ||||||||||||
Sbjct  252  ----------TTCATGGCATTGGGG----TCTTATCCGGA-AGGGGATTGTC--CTTTTTTGGGGGGAGTCGGT  308

Query  537  GAAGTACTTCCTGGACAACTTGGACCGGATCGGCCAGCTGAATTACTTTCCTAGTAAGCAAGATATCCTGCTGG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  309  GAAGTACTTCCTGGACAACTTGGACCGGATCGGCCAGCTGAATTACTTTCCTAGTAAGCAAGATATCCTGCTGG  382

Query  611  CTAGGAAAGCCACCAAGGGAATTGTGGAGCATGACTTCGTTATTAAGAAGATCCCCTTTAAGATGGTGGATGTG  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  383  CTAGGAAAGCCACCAAGGGAATTGTGGAGCATGACTTCGTTATTAAGAAGATCCCCTTTAAGATGGTGGATGTG  456

Query  685  GGCGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGATCACGTCCATCCTGTTCATGGTCTC  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  457  GGCGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGATCACGTCCATCCTGTTCATGGTCTC  530

Query  759  CTCCAGCGAGTACGACCAGGTCCTCATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTCCATGAACATCTTCG  832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  531  CTCCAGCGAGTACGACCAGGTCCTCATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTCCATGAACATCTTCG  604

Query  833  AGACCATCGTCAACAACAAGCTCTTCTTCAACGTCTCCATCATTCTCTTCCTCAACAAGATGGACCTCCTGGTG  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  605  AGACCATCGTCAACAACAAGCTCTTCTTCAACGTCTCCATCATTCTCTTCCTCAACAAGATGGACCTCCTGGTG  678

Query  907  GAGAAGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACAGGCTGGAGGACGT  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  679  GAGAAGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACAGGCTGGAGGACGT  752

Query  981  CCAGCGCTACCTGGTCCAGTGCTTCGACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCACTTCACCA  1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  753  CCAGCGCTACCTGGTCCAGTGCTTCGACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCACTTCACCA  826

Query 1055  CCGCCATCGACACCGAGAACGTCCGCTTCGTGTTCCATGCTGTGAAAGACACCATCCTGCAGGAGAACCTGAAG  1128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  827  CCGCCATCGACACCGAGAACGTCCGCTTCGTGTTCCATGCTGTGAAAGACACCATCCTGCAGGAGAACCTGAAG  900

Query 1129  GACATCATGCTGCAG  1143
            |||||||||||||||
Sbjct  901  GACATCATGCTGCAG  915