Nucleotide Global Alignment
Description
- Query:
- TRCN0000489782
- Subject:
- NR_146208.1
- Aligned Length:
- 5291
- Identities:
- 1407
- Gaps:
- 3884
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTCTGCTGACCCGGAAGCAGAGCTGTGCAGCTGAGGCGCCGCCGTGGAGCCGCCTTGGAGCCACCGCCCCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCTTCGCCGCTGCGTTGGGGAACCTGGACCGCGGCGGCGCCGGGTTTCCCTCATGATCCCGGGCGGGTGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCGGCGGCAGAGGCGGCGGGAGGATGACCTCTTACCGGGAGCGGAGTGCCGACCTGGCCCGTTTCTACACTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCGAGCCCCAGCGACACCCGAGGGGCTACACAGTATATAAGGTCACCGCCCGGATAATTGTATGGAAGAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGTGATTTTAAGAAACTACACAAAGAACTATGGCAAATTCACAAAAACTTATTCCGACATTCAGAGTTGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCCATTTGCTAAAGGAATAGTGTTTGGGCGATTTGATGAAACTGTTATCGAAGAGAGAAGACAATGTGCTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGACCTGCTACAGTTCTCTGCCAATATTCCTGCTCTTTACAATAGTAAACAGCTTGAAGACTTTTTCAAGGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCAAGCCCTACCCGTCGAGAAGCTGTGAAGAGAAGAACAGCCGAGTACCTCATGCGGGCAGAAAGTATCTCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCTTTATGGGAAACCTCAGCTTGATGATGTATCTCAGCCTCCAGGATCACTAAGTTCAAGGCCCCTTTGGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAAGGAGCCCTGCCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTTTTACTTGTAATGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACAAGGACAGAACAGACTTTCATTTTAAAAGGTCTAAGGAAAAGCAGTGAATACAGCAGGAACAGAAAGACCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCAGCATGCGGAAGGTGGCAAACTGTGGTCATATATCAGTAAATTTCTAAACAGAAGTCCTGAAGAAAGCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACATCAAGGAAGTGAAAAAACCTACACTTGCAAAAGTTCACCTGCAGCAGCCAACTTCTAGTCCTCAGGACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAGTAGCTTTGAATCCAGAGGAAGTGATGGTGGAAGCATGCTTAAAGCTCTGCCTTTGAAGAGTAGTCTTACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAAGTTCTCAAGATGACAGCAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCTGGTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGTTCAGAAGAAGAATGTACTACTAGTTATTTAACATTATGCAATGAATATGGGCAAGAAAAGATTGAACCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGTCTTTGAATGAGGAGCCCTTCATGAAGACTGAAGGGAATGGTGTTGATACAAAAGCTATTAAAAGCTTCCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCACACCTTGCTGCTGACAGTGACAGCCCCAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTTCCCCAACGA 1406
Query 1 ----------------------------------------------------------------ATGGAATTCT 10
||||||||||
Sbjct 1407 TGACCCAGAAGCAGTTAGTTCTCCAAGAACATCAGATTCCCTCAGTAGATCAAAAAATAGCCCCATGGAATTCT 1480
Query 11 TTAGGATAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGACTTGACTTTGGAGAAAAATTGTATAGTCTAAAA 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTAGGATAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGACTTGACTTTGGAGAAAAATTGTATAGTCTAAAA 1554
Query 85 TCAGAACCTTTGAAACCATTCTTTACTCTTCCAGATGGAGACAGTGCTTCTAGGAGTTTTAATACTAGTGAAAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCAGAACCTTTGAAACCATTCTTTACTCTTCCAGATGGAGACAGTGCTTCTAGGAGTTTTAATACTAGTGAAAG 1628
Query 159 CAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAGGGGCTCAGATGACTCAGTGCCAGTTATTTCATTTAAAG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAGGGGCTCAGATGACTCAGTGCCAGTTATTTCATTTAAAG 1702
Query 233 ATGCTGCTTTTGATGATGTCAGTGGTACTGATGAAGGAAGACCTGATCTTCTTGTAAATTTACCTGGTGAATTG 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATGCTGCTTTTGATGATGTCAGTGGTACTGATGAAGGAAGACCTGATCTTCTTGTAAATTTACCTGGTGAATTG 1776
Query 307 GAGTCAACAAGAGAAGCTGCAGCAATGGGACCTACTAAGTTTACACAAACTAATATAGGGATAATAGAAAATAA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAGTCAACAAGAGAAGCTGCAGCAATGGGACCTACTAAGTTTACACAAACTAATATAGGGATAATAGAAAATAA 1850
Query 381 ACTCTTGGAAGCCCCTGATGTTTTATGCCTCAGGCTTAGTACTGAACAATGCCAAGCACATGAGGAGAAAGGCA 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACTCTTGGAAGCCCCTGATGTTTTATGCCTCAGGCTTAGTACTGAACAATGCCAAGCACATGAGGAGAAAGGCA 1924
Query 455 TAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAACAGAGAAACACTATGCACAGGAGGATCCC 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAACAGAGAAACACTATGCACAGGAGGATCCC 1998
Query 529 AGGATGTTATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTGTTACCCAGCTCAGATCCTAA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGGATGTTATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTGTTACCCAGCTCAGATCCTAA 2072
Query 603 GTTTCAAGGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAACAACACAGAAGAAAGCTTATTCCGTATTTGTA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GTTTCAAGGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAACAACACAGAAGAAAGCTTATTCCGTATTTGTA 2146
Query 677 GTCCACTCTCAGGTGCTAATGAATATATTGCAAGCACAGACACTTTAAAAACAGAAGAAGTATTGCTGTTTACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GTCCACTCTCAGGTGCTAATGAATATATTGCAAGCACAGACACTTTAAAAACAGAAGAAGTATTGCTGTTTACA 2220
Query 751 GATCAGACTGATGATTTGGCTAAAGAGGAACCAACTTCTTTATTCCAGAGAGACTCTGAGACTAAGGGTGAAAG 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GATCAGACTGATGATTTGGCTAAAGAGGAACCAACTTCTTTATTCCAGAGAGACTCTGAGACTAAGGGTGAAAG 2294
Query 825 TGGTTTAGTGCTAGAAGGAGACAAGGAAATACATCAGATTTTTGAGGACCTTGATAAAAAATTAGCACTAGCCT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGGTTTAGTGCTAGAAGGAGACAAGGAAATACATCAGATTTTTGAGGACCTTGATAAAAAATTAGCACTAGCCT 2368
Query 899 CCAGGTTTTACATCCCAGAGGGCTGCATTCAAAGATGGGCAGCTGAAATGGTGGTAGCCCTTGATGCTTTACAT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCAGGTTTTACATCCCAGAGGGCTGCATTCAAAGATGGGCAGCTGAAATGGTGGTAGCCCTTGATGCTTTACAT 2442
Query 973 AGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAG------------------ 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAGAGGTCAGGAACTTTTGCA 2516
Query 1029 -------------------------------------------------------------------------- 1028
Sbjct 2517 AATGCATTTCTTTTTATTCGCTGTTGCTTCCAATTAACTGAGTAGGCGTTTTATCTTGTAATTAGTATCTTCAT 2590
Query 1029 -------------------------------------------------------------------------- 1028
Sbjct 2591 TTCCTGTCTAGAGCTTCATTATCAGTGCAGCAAATTCACCCCCAGTAATAGCTTCTAGTACTTAATGATGCCAT 2664
Query 1029 -------------------------------------------------------------------------- 1028
Sbjct 2665 TATTCTTAATGATACTGTTTTTAGCTACAAAAGGAGTAATTACAGTTCACTTCTGCAGAAAATGGAAGAGAAAA 2738
Query 1029 -------------------------------AGGACACATTCAGCTAACGTATTTTAGCAGGTGGAGTGAGGTT 1071
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 ATGTTTTGATTTCTCCTGTCGTTTTGTTTTTAGGACACATTCAGCTAACGTATTTTAGCAGGTGGAGTGAGGTT 2812
Query 1072 GAAGATTCCTGTGACAGCGATGCCATAGAGAGAATGTACTGTGCCCCAGAGGTTGGAGCAATCACTGAAGAAAC 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GAAGATTCCTGTGACAGCGATGCCATAGAGAGAATGTACTGTGCCCCAGAGGTTGGAGCAATCACTGAAGAAAC 2886
Query 1146 TGAAGCCTGTGATTGGTGGAGTTTGGGTGCTGTCCTCTTTGAACTTCTCACTGGCAAGACTCTGGTTGAATGCC 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TGAAGCCTGTGATTGGTGGAGTTTGGGTGCTGTCCTCTTTGAACTTCTCACTGGCAAGACTCTGGTTGAATGCC 2960
Query 1220 ATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTCTCTGAAGAGGCTCGCTCACTCATT 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 ATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTCTCTGAAGAGGCTCGCTCACTCATT 3034
Query 1294 CAACAGCTCTTGCAGTTCAATCCTCTGGAACGACTTGGTGCTGGAGTTGCTGGTGTTGAAGATATCAAATCTCA 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CAACAGCTCTTGCAGTTCAATCCTCTGGAACGACTTGGTGCTGGAGTTGCTGGTGTTGAAGATATCAAATCTCA 3108
Query 1368 TCCATTTTTTACCCCTGTGGATTGGGCAGAACTGATGAGA---------------------------------- 1407
||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TCCATTTTTTACCCCTGTGGATTGGGCAGAACTGATGAGATGAACGTAATGCAGGGTTATCTTCACACATTCTG 3182
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3183 ATCTTCTCTGTGACAGGCATCTCCAGCACTGAGGCACCTCTGACTCACAGTTACTTATGGAGCACCAAAGCATT 3256
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3257 TGGATAAAGACCGTTATAGGAAATGGGGGGGAAATGGCTAAAAGAGAACAATTCGTTTACAATTACAAGATATT 3330
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3331 AGCTAATTGTGCCAGGGGCTGTTATATACATATATACACAACCAAGGTGTGATCTGAATTTAATCCACATTTGG 3404
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3405 TGTTGCAGATGAGTTGTAAAGCCAACTGAAAGAGTTCCTTCAAGAAGTTCCTCTGATAGGAAGCTAGAAGTGTA 3478
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3479 GAATGAAGTTTTACTTGACAGAAGGACCTTTACATGGCAGCTAACAGTGCTTTTTGCTGACCAGGATTGGTTTA 3552
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3553 TATGATTAAATTAATATTTGCTTAATAATACACTAAAAGTATATGAACAATGTCATCAATGAAACTTAAAAGCG 3626
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3627 AGAAAAAAGAATATACACATAATTTCTGACGGAAAACCTGTACCCTGATGCTGTATAATGTATGTTGAATGTGG 3700
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3701 TCCCAGATTATTTCTGTAAGAAGACACTCCATGTTGTCAGCTTTGTACTCTTTGTTGATACTGCTTATTTAGAG 3774
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3775 AAGGGTTCATATAAACACTCACTCTGTGTCTTCAACAGCATCTTTCTTTCCCCATCTTTCTATTTTCTGCACCC 3848
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3849 TCTGCTTGTTCCCTCATATTCTGTTCTTCCGACTCCTGCTAACACACATGCAACAAAAAAGGGAAGGGAGTGCT 3922
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3923 TATTTCCCTTTGTGTAAGGACTAAGAAATCATGATATCAAATAAACATGGTGAAACATTAGATCTCTTCTTCAT 3996
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 3997 TTAATAACCCTCCCCCCTTTTTTTCCTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCT 4070
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4071 ACCATTGCTTCTCATGCTTGACTTTGTTTTACTTTTTGGCTTGGTATACTAAGAAGCAAAGGATCTCATCTAAA 4144
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4145 TGGAATTGAATGGCAGTCCTAGTTTGTTACTTATGGTGATGAGATTTTCAGATTTGAACTAATCTATTTGACGT 4218
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4219 GATTTAGAAAGAATGTAAGTATTCACACATCTCCAAACATTTGTATTTGTTACTTCTTTTTGTTGCTAAGGTAG 4292
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4293 CTCCTGTAGTTATGCATTGTTGCAAAAATTTACAAATGTTTTAAAAGTGTTAACATCTGTTTTTTTTTAAACGT 4366
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4367 TAGCCAAAGAAGAAGTCACTATTTCCAAGTTAGAAACCACCAGAAATAATTGAAATTTTTGATATGTTCTAATC 4440
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4441 TTCTTTGCATTTTTGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCAT 4514
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4515 CGACCAGGTCCTCTCATCAAATTAAATGGAACAGAAAATGCTCTAGTGAAACAAAGGAAATGTGCAAGCATTTT 4588
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4589 TCCTTTTTCTATTATTCTATTTCCCTTTTTCCTTTTTGGCCCCCTTATAATCCAAACCCCAGCTGAAAGGCTGC 4662
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4663 AACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATAGTTCAGTCAAAATGACATCACTCCCTGGAACTAGAT 4736
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4737 TTCAACTCACTAGTCCCCTGGCCTCATAACAGGAACTTATGCAGGTGAGACACAAGAATGACTTCCTGTGTAGG 4810
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4811 ACTAGTAGGAAATCTGCAAGTACTTAGAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAA 4884
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4885 AGTAGGACTTCACAACTAAGGTGAAGATCCCTGCCCTACCACATGATTTGAGTCTCTTGGATTCAAAGGACATT 4958
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 4959 AATGTCAACAGATGGTTGCCATGTCAGTCTGTTGACACAATTCCATTGCTTCAGTTTCTCCCCTTTTCTCTCTA 5032
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 5033 TATGTTTGGTTGGAGCTTGTGCCTAATGTAAATACATCATTCATAATTAGAATGGACATTAATTATTTTAGTAA 5106
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 5107 TAAACACAGGATAAATAGCTTTGGGGTGATGAACCAGAGTCTGTTTTTATTTTATGGTGTGTACATATTTTAAG 5180
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 5181 CTGTACTTCTGTGAATGGTACTGATTTTTGTGGTTGTTTTTTTTTTATATTTTGTTTGTTTAAGCAGAAGAGTG 5254
Query 1408 ------------------------------------- 1407
Sbjct 5255 GAATATGGGGTCAAAATCATAAAAGAAGTTGCCATGA 5291
