Nucleotide Global Alignment
Description
- Query:
- TRCN0000489797
- Subject:
- XM_006539993.2
- Aligned Length:
- 2346
- Identities:
- 1091
- Gaps:
- 1117
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCAGGGTCCCGCTGGCCTGGTGGTTGGCGCTGTGCTGCTGGGGGTGTGCAGCCCATAAGGACACACAGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCTGGCAGCCCGTTTGTGGGGAACCCAGGGAATATCACAGGTGCCAGAGGACTCACGGGGACACTTCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAGCTCCAGGTTCAGGGGGAACCCCCTGAGGTGGTGTGGCTTCGAGATGGACAGATCCTAGAACTGGCTGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACACCCAGACCCAGGTGCCTCTGGGCGAAGACTGGCAAGATGAATGGAAAGTTGTCAGTCAGCTCAGAATCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCCTGCAACTTTCAGATGCAGGGGAGTACCAGTGTATGGTGCATCTAGAAGGACGGACCTTTGTGTCTCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGCTTTGTAGGGCTGGAAGGTCTCCCGTACTTCCTGGAGGAGCCTGAGGACAAAGCTGTGCCTGCCAACACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTTTCAACCTAAGCTGCCAGGCCCAGGGACCCCCGGAACCCGTGACCCTACTCTGGCTTCAAGATGCTGTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGGCCCCAGTCACAGGACACAGCTCCCAGCACAGTCTGCAAACTCCAGGCCTGAACAAGACATCTTCTTTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATGTGAAGCCCACAATGCCAAGGGAGTCACCACCTCCCGCACAGCCACCATCACAGTGCTCCCCCAGAGGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCATCTCCACGTGGTTTCCAGACAACCTACGGAGCTAGAGGTAGCTTGGACCCCTGGCCTGAGTGGCATCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCGCTCACCCACTGCAACCTGCAGGCCGTGCTGTCAGACGATGGGGTGGGTATCTGGCTGGGAAAGTCAGATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCCTGAAGACCCCCTCACCTTGCAAGTATCAGTGCCCCCCCACCAGCTTCGGCTGGAAAAGCTCCTTCCTCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCCCGTATCACATCCGGATATCCTGCAGCAGCAGCCAGGGCCCCTCACCTTGGACCCACTGGCTTCCTGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACCACAGAGGGAGTGAGTGAACCCCCACCTCGCGCCTTCTCGTGGCCTTGGTGGTATGTACTGCTGGGAGCAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTGGCTGCCGCCTGCGTCCTCATCTTGGCCCTGTTCCTTGTCCATCGGAGGAAGAAGGAGACTCGATATGGG 1110
Query 1 -------TTGAACCAACAGTGGAAAGAGGTGAACTGGTAGTCAGGTACCGCGTGCGCAAGTCCTACAGTCGTCG 67
||||.|||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.||.||
Sbjct 1111 GAGGTGTTTGAGCCAACCGTGGAAAGAGGTGAACTGGTAGTCAGGTACCGTGTCCGAAAGTCCTACAGCCGGCG 1184
Query 68 GACCACTGAAGCTACCTTGAACAGCTTGGGCATCAGTGAAGAGCTGAAGGAGAAGCTGCGGGATGTGATGGTGG 141
||||||||||||.|||||||||||..||||||||||||||||||||||||||||.||.||.||.||.|||||.|
Sbjct 1185 GACCACTGAAGCCACCTTGAACAGTCTGGGCATCAGTGAAGAGCTGAAGGAGAAACTACGAGACGTCATGGTAG 1258
Query 142 ACCGGCACAAGGTGGCCCTGGGGAAGACTCTGGGAGAGGGAGAGTTTGGAGCTGTGATGGAAGGCCAGCTCAAC 215
|.|||||.|||||||||.||||||||||.||||||||.|||||.|||||.||||||||||||||.||||||||.
Sbjct 1259 ATCGGCATAAGGTGGCCTTGGGGAAGACCCTGGGAGAAGGAGAATTTGGCGCTGTGATGGAAGGTCAGCTCAAT 1332
Query 216 CAGGACGACTCCATCCTCAAGGTGGCTGTGAAGACGATGAAGATTGCCATCTGCACGAGGTCAGAGCTGGAGGA 289
|||||.|||||||||||||||||.|||||||||||.|||||.||||||||||||||.||.||||||||||||||
Sbjct 1333 CAGGATGACTCCATCCTCAAGGTCGCTGTGAAGACCATGAAAATTGCCATCTGCACAAGATCAGAGCTGGAGGA 1406
Query 290 TTTCCTGAGTGAAGCGGTCTGCATGAAGGAATTTGACCATCCCAACGTCATGAGGCTCATCGGTGTCTGTTTCC 363
|||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.|
Sbjct 1407 TTTCCTGAGTGAAGCTGTCTGCATGAAGGAATTTGACCACCCCAACGTCATGAGGCTCATTGGCGTCTGTTTTC 1480
Query 364 AGGGTTCTGAACGAGAGAGCTTCCCAGCACCTGTGGTCATCTTACCTTTCATGAAACATGGAGACCTACACAGC 437
||||.|||||..|||||.|.|||||||.|||||||||||||||.||||||||||||||.||||||||||||||.
Sbjct 1481 AGGGCTCTGACAGAGAGGGTTTCCCAGAACCTGTGGTCATCTTGCCTTTCATGAAACACGGAGACCTACACAGT 1554
Query 438 TTCCTCCTCTATTCCCGGCTCGGGGACCAGCCAGTGTACCTGCCCACTCAGATGCTAGTGAAGTTCATGGCAGA 511
||||||||.||.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.||
Sbjct 1555 TTCCTCCTGTACTCCCGGCTCGGGGACCAGCCAGTGTTCCTGCCCACTCAGATGCTAGTGAAGTTCATGGCCGA 1628
Query 512 CATCGCCAGTGGCATGGAGTATCTGAGTACCAAGAGATTCATACACCGGGACCTGGCGGCCAGGAACTGCATGC 585
|||.||||||||.||||||||.|||||||||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct 1629 CATTGCCAGTGGTATGGAGTACCTGAGTACCAAGAGATTCATACATCGGGACCTGGCTGCCAGGAACTGCATGC 1702
Query 586 TGAATGAGAACATGTCCGTGTGTGTGGCGGACTTCGGGCTCTCCAAGAAGATCTACAATGGGGACTACTACCGC 659
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 1703 TGAATGAGAACATGTCCGTGTGTGTGGCAGACTTCGGGCTCTCCAAGAAGATCTACAACGGGGATTACTACCGC 1776
Query 660 CAGGGACGTATCGCCAAGATGCCAGTCAAGTGGATTGCCATTGAGAGTCTAGCTGACCGTGTCTACACCAGCAA 733
||.||.||.||.||||||||||||||||||||||||||.|||||||||||.||.||.||.||||||||||||||
Sbjct 1777 CAAGGGCGCATTGCCAAGATGCCAGTCAAGTGGATTGCTATTGAGAGTCTGGCAGATCGGGTCTACACCAGCAA 1850
Query 734 GAGCGATGTGTGGTCCTTCGGGGTGACAATGTGGGAGATTGCCACAAGAGGCCAAACCCCATATCCGGGCGTGG 807
|||||||||||||||||||||.|||||||||||||||||.|||||..||||||||||.||.|||||.||.||||
Sbjct 1851 GAGCGATGTGTGGTCCTTCGGTGTGACAATGTGGGAGATCGCCACCCGAGGCCAAACTCCCTATCCAGGGGTGG 1924
Query 808 AGAACAGCGAGATTTATGACTATCTGCGCCGGGGAAATCGCCTGAAGCAGCCTGCGGACTGTCTGGATGGACTG 881
|||||||.||||||||.|||||.|||||.|..||||||||.|||||.|||||||.||||||||||||.||.|||
Sbjct 1925 AGAACAGTGAGATTTACGACTACCTGCGTCAAGGAAATCGGCTGAAACAGCCTGTGGACTGTCTGGACGGCCTG 1998
Query 882 TATGCCTTGATGTCGCGGTGCTGGGAGCTAAATCCCCAGGACCGGCCAAGTTTTACAGAGCTGCGGGAAGATTT 955
||||||.|||||||.|||||||||||.||.||.||.|..|||||||||||||||.|.|||||.||||||||.||
Sbjct 1999 TATGCCCTGATGTCTCGGTGCTGGGAACTGAACCCTCGAGACCGGCCAAGTTTTGCGGAGCTCCGGGAAGACTT 2072
Query 956 GGAGAACACACTGAAGGCCTTGCCTCCTGCCCAGGAGCCTGACGAAATCCTCTATGTCAACATGGATGAGGGTG 1029
||||||||||||||||||..||||.|||||.||||||||.||.|||||||||||||||||||||||||||||.|
Sbjct 2073 GGAGAACACACTGAAGGCTCTGCCCCCTGCTCAGGAGCCAGATGAAATCCTCTATGTCAACATGGATGAGGGCG 2146
Query 1030 GAGGTTATCCTGAACCCCCTGGAGCTGCAGGAGGAGCTGACCCCCCAACCCAGCCAGACCCTAAGGATTCCTGT 1103
||.|..|.|.||||||||.|||.|||||.|||||||||||||||||||||||.||.||.|||||||||||||||
Sbjct 2147 GAAGCCACCTTGAACCCCGTGGGGCTGCTGGAGGAGCTGACCCCCCAACCCAACCTGATCCTAAGGATTCCTGT 2220
Query 1104 AGCTGCCTCACTGCGGCTGAGGTCCATCCTGCTGGACGCTATGTCCTCTGCCCTTCCACAACCCCTAGCCCCGC 1177
|||||.||||||||.|||||.|||||..|.|||||||||||||||||.||.|||||.|||.||||..|.|||.|
Sbjct 2221 AGCTGTCTCACTGCAGCTGACGTCCACTCAGCTGGACGCTATGTCCTTTGTCCTTCTACAGCCCCAGGACCCAC 2294
Query 1178 TCAGCCTGCTGATAGGGGCTCCCCAGCAGCCCCAGGGCAGGAGGATGGTGCC 1229
||.|.|||||||.||.||||.|||||||.|.||||||||||||||.||.|||
Sbjct 2295 TCTGTCTGCTGACAGAGGCTGCCCAGCACCTCCAGGGCAGGAGGACGGAGCC 2346
