Nucleotide Global Alignment

Description

Query:
TRCN0000489808
Subject:
NM_001080448.3
Aligned Length:
3394
Identities:
1007
Gaps:
2352

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAATTCCCCTCGCCTCCAGCCGCGAGGAGCTCCCCGGCGCCGCAGGCAGCGTCCTCCTCCGAAGCAGCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTGCAACTGGGCAGCCTGGACCCTCGTGCCCTGTTCCCGGGACCTCGCGCAGGGGGCGCCCCGGGACACCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGCGGGCCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGACGTGGACAAGGACCCCCATCCTACCCAGAAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCTGCCTGCGCTGCCGCCACTTCTCTTTAAGGGAGAGGAAAAGAGAGCCTAGGAGAACCATGGGGGGCTGCGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCTCTGCTGACAGCGTGGCCAGGCGACTGCAGTCACG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTCCAACAACCAAGTTGTGTTGCTTGATACAACAACTGTACTGGGAGAGCTAGGATGGAAAACATATCCATTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGGGTGGGATGCCATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGAACCAAACCAAAACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGAAATTCACACTAAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TATATGGAATCAGATGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGATGAGAGTTTTACCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTATAGAAAGGAAAGGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCTACAAGAAATGCCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTCTTTGGTTGAAGTACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTGATGGAGATTGGCTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CATGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTC  1702

Query    1  ---------------------AT--GAAAG------------------ACTC-TCCATTTCAAGTGACAAA---  29
                                 ||  |||||                  |||| ||||   ||||...||||   
Sbjct 1703  TGGACTACGAGATCAAGTACTATGAGAAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCC  1773

Query   30  ---ACTGT-------ACTGG-CTTAA--------------------------------TGAAAAGTGGGAC---  57
               |.|||       ||.|| |||||                                |||.||.||.|||   
Sbjct 1774  CCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGG  1847

Query   58  -TTTATTGCCT-CAG--------------------------------CTTCTGACATGGCAGCAGAACAAGGAC  97
             |..|.||.|| |||                                |||||||||||||||||||||||||||
Sbjct 1848  ATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGAC  1921

Query   98  AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC  171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922  AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC  1995

Query  172  ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996  ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG  2069

Query  246  GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070  GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG  2143

Query  320  AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144  AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC  2217

Query  394  TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT  467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218  TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT  2291

Query  468  GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292  GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC  2365

Query  542  TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA  615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366  TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA  2439

Query  616  GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG  689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2440  GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG  2513

Query  690  CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC  763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514  CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC  2587

Query  764  ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT  837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2588  ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT  2661

Query  838  TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG  911
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2662  TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG  2735

Query  912  TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG---------ACCTCTT--------  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||         .||.|.|        
Sbjct 2736  TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGA  2809

Query  969  -----CCAAA--------CTCTA---ACACTTAACCTC----------------TGCTAT--------------  996
                 |||.|        | |||   |.|.||..||||                .|||||              
Sbjct 2810  CAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTG  2882

Query  997  -------------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG  1043
                         |.||.|.|.|     |..||.||||     |.||||..|    |||||||..|..||||||
Sbjct 2883  GGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAG  2956

Query 1044  ---ACA--------------------------------------------------------------------  1046
               |||                                                                    
Sbjct 2957  GGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAG  3030

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 3031  AGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCA  3104

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 3105  CACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAG  3178

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 3179  TTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTT  3252

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 3253  GACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAAT  3326

Query 1047  ----------------------------------------------------------------  1046
                                                                            
Sbjct 3327  AGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA  3390

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