Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- NM_001080448.3
- Aligned Length:
- 3394
- Identities:
- 1007
- Gaps:
- 2352
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAATTCCCCTCGCCTCCAGCCGCGAGGAGCTCCCCGGCGCCGCAGGCAGCGTCCTCCTCCGAAGCAGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGCAACTGGGCAGCCTGGACCCTCGTGCCCTGTTCCCGGGACCTCGCGCAGGGGGCGCCCCGGGACACCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCGGGCCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGACGTGGACAAGGACCCCCATCCTACCCAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCTGCCTGCGCTGCCGCCACTTCTCTTTAAGGGAGAGGAAAAGAGAGCCTAGGAGAACCATGGGGGGCTGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCTCTGCTGACAGCGTGGCCAGGCGACTGCAGTCACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTCCAACAACCAAGTTGTGTTGCTTGATACAACAACTGTACTGGGAGAGCTAGGATGGAAAACATATCCATTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGGTGGGATGCCATCACTGAAATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACCAAACCAAAACAACTGGCTTCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAATTCACACTAAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATATGGAATCAGATGAGTCCCACGGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGAGAGTTTTACCCAGATGGATTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATAGAAAGGAAAGGATTTTATCTGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTACAAGAAATGCCCCTTCACTGTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTTTGGTTGAAGTACGGGGTTCTTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGATGGAGATTGGCTGGTTCCTCTTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTC 1702
Query 1 ---------------------AT--GAAAG------------------ACTC-TCCATTTCAAGTGACAAA--- 29
|| ||||| |||| |||| ||||...||||
Sbjct 1703 TGGACTACGAGATCAAGTACTATGAGAAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCC 1773
Query 30 ---ACTGT-------ACTGG-CTTAA--------------------------------TGAAAAGTGGGAC--- 57
|.||| ||.|| ||||| |||.||.||.|||
Sbjct 1774 CCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGG 1847
Query 58 -TTTATTGCCT-CAG--------------------------------CTTCTGACATGGCAGCAGAACAAGGAC 97
|..|.||.|| ||| |||||||||||||||||||||||||||
Sbjct 1848 ATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGAC 1921
Query 98 AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 AGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATC 1995
Query 172 ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 ACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGG 2069
Query 246 GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 GCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATG 2143
Query 320 AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 AATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTC 2217
Query 394 TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 TGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACAT 2291
Query 468 GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 GGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCC 2365
Query 542 TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 TAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCA 2439
Query 616 GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2440 GGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGG 2513
Query 690 CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 CAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCC 2587
Query 764 ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2588 ACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGT 2661
Query 838 TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2662 TATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGG 2735
Query 912 TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG---------ACCTCTT-------- 968
|||||||||||||||||||||||||||||||||||||||||||||||||| .||.|.|
Sbjct 2736 TCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGA 2809
Query 969 -----CCAAA--------CTCTA---ACACTTAACCTC----------------TGCTAT-------------- 996
|||.| | ||| |.|.||..|||| .|||||
Sbjct 2810 CAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTG 2882
Query 997 -------------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG 1043
|.||.|.|.| |..||.|||| |.||||..| |||||||..|..||||||
Sbjct 2883 GGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAG 2956
Query 1044 ---ACA-------------------------------------------------------------------- 1046
|||
Sbjct 2957 GGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAG 3030
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3031 AGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCA 3104
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3105 CACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAG 3178
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3179 TTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTT 3252
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3253 GACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAAT 3326
Query 1047 ---------------------------------------------------------------- 1046
Sbjct 3327 AGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA 3390