Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- NM_007938.2
- Aligned Length:
- 3426
- Identities:
- 888
- Gaps:
- 2416
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAATTCCCCTCGCCTCCAGCCGCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGCGCACCGGGCCTCGCGCGGGGGGCGCCCCGGGACTTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCGGACCGGGTGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAGAGCTTGGTTCAGGACCCCCACGCTACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGAACACCTGGCTGCGCTGCTGCCACTTCTTTTTAAGGAGGAGAAGAGAACCAACCAGAGCCATGGGGGGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGAAGTCCGGGAATTTCTTTTGCAATTTGGTTTCTTCTTGCCCCTGCTAACGGCTTGGACCGGCGACTGCAGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACATATCCATTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGGTGGGATGCCATTACTGAAATGGATGAACACAATAGGCCCATACATACATACCAGGTATGCAATGTCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAACCAAACCAGAACAACTGGCTTCGTACTAACTGGATCTCTCGTGATGCTGCACAGAAAATTTATGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAGTTCACACTGAGGGATTGTAACAGCATCCCATGGGTCTTGGGGACTTGTAAAGAAACCTTTAACCTGTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATATAGAATCCGATGAATCCCATGGGACAAAATTCAAGCCAAGCCAATATATAAAGATCGACACAATTGCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGAGAGTTTTACTCAGATGGATTTGGGTGACCGCATCCTTAAACTCAACACTGAAATCCGTGAGGTGGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATAGAAAGGAAAGGATTTTATTTGGCTTTTCAAGATATTGGAGCATGCATCGCTCTGGTCTCAGTCCGAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTACAAAAAATGCCCCTTCACCGTGCGGAACTTGGCTATGTTTCCTGATACCATCCCAAGGGTTGATTCTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTTTGGTTGAAGTGCGGGGCTCATGTGTAAAGAGTGCTGAGGAGCGAGATACTCCTAAACTCTACTGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGATGGGGATTGGCTTGTTCCTCTTGGAAGGTGTATCTGCAGTACAGGGTATGAAGAAATCGAGGGTTCTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATGCTTGCAGACCAGGATTCTACAAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCTACGTGGAAGCAACGTCAGTCTGTCATTGTGAAAAGGGTTACTTCCGGGCAGAAAAAGACCCACCTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGCATGCACTAGACCACCTTCAGCTCCTAGAAATGTGGCTTTTAACATCAATGAAACAGCCCTTATTTTGGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAGCCCACCCAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGTTTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACTACCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACACACTGGACTGATCAACAATTCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGTAGTACTGGACTTTGTGTCTCACGTCAATTATACCTTTGAAATAGAAGCCATGAATGGAGTTTCTGAGTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCATCTCTCCCAAGCCATTCACAGCTATTACAGTGACTACAGATCACGATGCACCTTCTCTGATTGGTATGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGAAAGGACTGGGCATCTCAGAACAGCCTTGCTCTATCGTGGCAAGCACCTGCATTTTCCAATGGAGCTATTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGACTATGAGATCAAGTACTACGAGAAAGAGCATGAGCAGCTCACCTATTCCTCCACGAGGTCCAAGGCCCCA 1776
Query 1 ---------------------------------------ATGAAAGACTCTCCATTTCA------AGTGA---- 25
|| |||||| |||||
Sbjct 1777 AGCGTCATCGTCACGGGCCTCAAGCCCGCCACCACGTACAT------------ATTTCACATCCGAGTGAGGAC 1838
Query 26 --CAAAA--CTGTACTGGCT-TAATGAAAAGTGGGACTTTATTGCCTCAG---------CTTCTGACATGGCAG 85
|.|.| ||..|.||||| .|.|.|.||||..||.| |||...||| |||||||||||||.|
Sbjct 1839 GGCGACAGGCTACAGTGGCTACAGTCAGAAGTTTGAAT---TTGAAACAGGAGATGAAACTTCTGACATGGCGG 1909
Query 86 CAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTA 159
||||||||||.||||||||.||.||||||||.||.||.||.||.||||||||||||.|.|||||||||||..|.
Sbjct 1910 CAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCCGTCGGGGGATTCACTCTCTTAGTCATCCTCACCCTG 1983
Query 160 TTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCA 233
||||||.|.|||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||||||||||..||
Sbjct 1984 TTCTTCCTCATCACTGGGAGGTGTCAATGGTACATAAAGGCCAAAATGAAGTCAGAAGAGAAGAGAAGAACTCA 2057
Query 234 CTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCC 307
|||||||||.||.||..||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||
Sbjct 2058 CTTACAGAACGGCCACCTGCGCTTCCCGGGAATTAAAACATACATTGATCCAGACACCTATGAAGACCCATCCC 2131
Query 308 TAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAA 381
||||||||||.|||||||||||.|||||||||||.|||||||||||.|||||||||||.|||||.|||||||||
Sbjct 2132 TAGCAGTCCACGAATTTGCAAAAGAGATTGATCCTTCAAGAATTCGCATTGAGAGAGTGATTGGAGCAGGTGAA 2205
Query 382 TTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAA 455
||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||
Sbjct 2206 TTTGGAGAAGTCTGCAGTGGGCGTTTGAAGACACCAGGGAAAAGGGAGATCCCAGTTGCAATTAAAACATTGAA 2279
Query 456 AGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAA 529
|||||||||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||||||||.||||
Sbjct 2280 AGGTGGCCACATGGACCGACAAAGAAGAGATTTTCTAAGAGAAGCTAGCATCATGGGTCAGTTTGACCACCCAA 2353
Query 530 ACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGC 603
|||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||.||.||.|||||||||
Sbjct 2354 ACATCATTCGCCTAGAAGGTGTTGTCACTAAAAGATCCTTCCCGGCGATTGGGGTGGAAGCCTTCTGCCCCAGC 2427
Query 604 TTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAG 677
|||||.|||||.||||||||||||.|||||||.||.||.|||||||||.|.|..|||||.|||.||||||||||
Sbjct 2428 TTCCTAAGGGCTGGGTTTTTAAATGGCATCCAAGCGCCACATCCAGTGACTGCAGGAGGCTCTCTGCCCCCCAG 2501
Query 678 GATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGA 751
|||||||||.||..|.|||||||||||.||.||.||.|||||||||||||||||.||.||||||||||||||||
Sbjct 2502 GATTCCTGCAGGTCGGCCAGTAATGATCGTAGTAGAGTATATGGAGAATGGATCACTGGACTCCTTTTTGCGGA 2575
Query 752 AGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTT 825
|||||||||||||||||||.|||||||||||||||||.|||||..|.|||||.||.||||||||||||||||||
Sbjct 2576 AGCATGATGGCCACTTCACCGTCATCCAGTTGGTCGGCATGCTGAGGGGCATCGCGTCAGGCATGAAGTATCTT 2649
Query 826 TCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGT 899
|||||.|||||.||||||||||||||.||.||.||..||||.||||||||.||.|||||||||||||||||.||
Sbjct 2650 TCTGACATGGGATATGTTCATCGAGATCTTGCCGCGAGGAACATACTGGTGAACAGCAACTTAGTATGCAAGGT 2723
Query 900 TTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG------ACCTCT 967
.||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||.| |
Sbjct 2724 CTCTGATTTTGGTCTCTCCCGAGTGCTGGAAGATGATCCAGAAGCAGCTTATACAACAACGGGAGGGAA----- 2792
Query 968 TCCAAACTCTA--------ACA----CTTAACCTCTGCTATTCTGCATAAATTCTGAGAAA---------AGCC 1020
||.|.||| ||| |..|| ||||| |||.|| .||||| ||||
Sbjct 2793 ---AATCCCTATACGGTGGACAGCCCCAGAA-----GCTAT--TGCTTA------CAGAAAGTTCTCCTCAGCC 2850
Query 1021 A-------------------AATTTTC-TGTCGG---------TCTAAGAAGACA------------------- 1046
| .|||.|| |||.|| .|||.|.|||.|
Sbjct 2851 AGTGACGCGTGGAGCTACGGGATTGTCATGTGGGAGGTGATGTCCTATGGAGAGAGACCGTACTGGGAAATGTC 2924
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2925 CAACCAGGATGTTATCTTGTCCATTGAAGAAGGTTACCGACTTCCTGCTCCGATGGGCTGCCCACCGTCTCTGC 2998
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2999 ACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAACCACAGGCCAAAATTCACTGACATCGTCAGCTTCCTT 3072
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3073 GACAAACTGATCCGCAACCCCAGTGCCCTTCACACGCTGGTGGAGGACATCCTTGTAATGCCAGAATCCCCTGG 3146
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3147 TGATGTTCCTGAATATCCATTGTTTGTCACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGA 3220
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3221 GTAACTTCATGGCAGCGGGTTTTACAACGTTTGATCTGATTTCACGAATGAGCATCGATGATATTAGGCGAATT 3294
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 3295 GGAGTCATTCTCATTGGACATCAGAGACGAATAGTCAGCAGCATACAAACTTTACGTTTACATATGATGCACAT 3368
Query 1047 ---------------------- 1046
Sbjct 3369 ACAGGAAAAAGGATTTCATGTA 3390
