Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006212.1
- Aligned Length:
- 3040
- Identities:
- 1006
- Gaps:
- 1998
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTACTTCTCCTCTGGATGTACATGCTGCAGCTCCATAGGAGCCAGTGGGATGCCATCACTGAAATGGATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAATGGAACCAAACCAAAACAACTGGCTTCGTACAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAATGAAATTCACACTAAGGGATTGTAACAGCATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTTTATATGGAATCAGATGAGTCCCACGGAATTAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGCTGATGAGAGTTTTACCCAGATGGATTTGGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGCCTATAGAAAGGAAAGGATTTTATCTGGCTTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTTTTCTACAAGAAATGCCCCTTCACTGTTCGTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTCCTCTTTGGTTGAAGTACGGGGTTCTTGTGTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAGCTGATGGAGATTGGCTGGTTCCTCTTGGAAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGCCATGCTTGCAGACCAGGATTCTATAAAGCTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTTAACATACATGGAAGCAACTTCTGTCTGTCAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTATGGCATGTACCAGGCCACCTTCAGCTCCTAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCAAGTGACACAGGAGGGAGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTGAGGACTGTGGTGGAGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCGTGATAGTACTTGACTTTGTGTCTCACGTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAAGCCATTCACAGCTATTAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGGCATCCCAAAATAGCATTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTCTGGACTACGAGATCAAGTACTATGAGAAAGTC 1332
Query 1 -------------------------------------------------ATGA-AAG-------ACTC-TCCAT 16
|||| .|| |||| ||||
Sbjct 1333 TACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTAGAAGAACATGAGCAGCTGACCTACTCTTCCA- 1405
Query 17 TTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA-------------------------------- 44
||||...|||| |.||| ||.|| |||||
Sbjct 1406 --CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAG 1477
Query 45 TGAAAAGTGGGAC----TTTATTGCCT-CAG--------------------------------CTTCTGACATG 81
|||.||.||.||| |..|.||.|| ||| |||||||||||
Sbjct 1478 TGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATG 1551
Query 82 GCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCAC 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 GCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCAC 1625
Query 156 TTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAA 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 TTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAA 1699
Query 230 ACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCA 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 ACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCA 1773
Query 304 TCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGG 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 TCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGG 1847
Query 378 TGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTT 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 TGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTT 1921
Query 452 TGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCAT 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 TGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCAT 1995
Query 526 CCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 CCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCC 2069
Query 600 CAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCC 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 CAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCC 2143
Query 674 CCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 CCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTG 2217
Query 748 CGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTA 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 CGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTA 2291
Query 822 TCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 TCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCA 2365
Query 896 AAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG-------- 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2366 AAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAA 2439
Query 962 -ACCTCTT-------------CCAAA--------CTCTA---ACACTTAACCTC----------------TGCT 994
.||.|.| |||.| | ||| |.|.||..|||| .|||
Sbjct 2440 ATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCT 2512
Query 995 AT---------------------------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT----TT 1027
|| |.||.|.|.| |..||.|||| |.||||..| ||
Sbjct 2513 ATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATT 2586
Query 1028 CTGTCGGTCTAAGAAG---ACA---------------------------------------------------- 1046
|||||..|..|||||| |||
Sbjct 2587 CTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCA 2660
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2661 CTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAA 2734
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2735 ATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATAT 2808
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2809 CCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGC 2882
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2883 AGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTG 2956
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2957 GACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTT 3030
Query 1047 ------ 1046
Sbjct 3031 CATGTA 3036
