Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006213.1
- Aligned Length:
- 2974
- Identities:
- 1006
- Gaps:
- 1932
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGAACATAATAGGCCCATTCACACATACCAGGTATGTAATGTAATGGAACCAAACCAAAACAACTGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGTACAAACTGGATCTCCCGTGATGCAGCTCAGAAAATTTATGTGGAAATGAAATTCACACTAAGGGATTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCATCCCATGGGTCTTGGGGACTTGCAAAGAAACATTTAATCTGTTTTATATGGAATCAGATGAGTCCCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAATTAAATTCAAGCCAAACCAGTATACAAAGATCGACACAATTGCTGCTGATGAGAGTTTTACCCAGATGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGGGTGATCGCATCCTCAAACTCAACACTGAAATTCGTGAGGTGGGGCCTATAGAAAGGAAAGGATTTTATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCTTTTCAAGACATTGGGGCGTGCATTGCCCTGGTTTCAGTCCGTGTTTTCTACAAGAAATGCCCCTTCACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTCGTAACTTGGCCATGTTTCCTGATACCATTCCAAGGGTTGATTCCTCCTCTTTGGTTGAAGTACGGGGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGTGTGAAGAGTGCTGAAGAGCGTGACACTCCTAAACTGTATTGTGGAGCTGATGGAGATTGGCTGGTTCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGGAAGGTGCATCTGCAGTACAGGATATGAAGAAATTGAGGGTTCTTGCCATGCTTGCAGACCAGGATTCTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGCTTTTGCTGGGAACACAAAATGTTCTAAATGTCCTCCACACAGTTTAACATACATGGAAGCAACTTCTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGTCAGTGTGAAAAGGGTTATTTCCGAGCTGAAAAAGACCCACCTTCTATGGCATGTACCAGGCCACCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCCTAGGAATGTGGTTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCAAGTGACACAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAGAAAAGATCTCACATACAGTGTAATCTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTGAGGACTGTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGGACTCCGCTTCATCCCAAGACATACAGGCCTGATCAACAATTCCGTGATAGTACTTGACTTTGTGTCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGTGAATTACACCTTTGAAATAGAAGCAATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAAGCCATTCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTATTACAGTGACCACGGATCAAGATGCACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGGCATCCCAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAGCATTGCCCTATCATGGCAAGCACCTGCTTTTTCCAATGGAGCCATTCTGGACTACGAGATCAAGTACTATG 1258
Query 1 ---------------------------------------------------------ATGA-AAG-------AC 9
|||| .|| ||
Sbjct 1259 AGAAAGTCTACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTAGAAGAACATGAGCAGCTGACCTAC 1332
Query 10 TC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA------------------------ 44
|| |||| ||||...|||| |.||| ||.|| |||||
Sbjct 1333 TCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCA 1403
Query 45 --------TGAAAAGTGGGAC----TTTATTGCCT-CAG--------------------------------CTT 73
|||.||.||.||| |..|.||.|| ||| |||
Sbjct 1404 CATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTT 1477
Query 74 CTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478 CTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTC 1551
Query 148 ATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAA 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 ATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAA 1625
Query 222 GAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATG 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 GAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATG 1699
Query 296 AAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATT 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 AAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATT 1773
Query 370 GGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCAT 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 GGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCAT 1847
Query 444 TAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGT 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 TAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGT 1921
Query 518 TTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCG 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 TTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCG 1995
Query 592 TTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATC 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 TTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATC 2069
Query 666 TTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACT 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 TTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACT 2143
Query 740 CCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGC 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 CCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGC 2217
Query 814 ATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 ATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTT 2291
Query 888 AGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 AGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG 2365
Query 962 ---------ACCTCTT-------------CCAAA--------CTCTA---ACACTTAACCTC------------ 990
.||.|.| |||.| | ||| |.|.||..||||
Sbjct 2366 GTGGAAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGC 2438
Query 991 ----TGCTAT---------------------------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAA 1023
.||||| |.||.|.|.| |..||.|||| |.||||.
Sbjct 2439 ATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAG 2512
Query 1024 TT----TTCTGTCGGTCTAAGAAG---ACA-------------------------------------------- 1046
.| |||||||..|..|||||| |||
Sbjct 2513 ATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTG 2586
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2587 ATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACT 2660
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2661 GATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTC 2734
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2735 CGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTC 2808
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2809 GTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCAT 2882
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2883 ACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGA 2956
Query 1047 -------------- 1046
Sbjct 2957 AGGGATTTCATGTA 2970
