Nucleotide Global Alignment

Description

Query:
TRCN0000489808
Subject:
XM_017006214.1
Aligned Length:
2353
Identities:
1006
Gaps:
1311

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAAACATATCCATTAAATGGGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAATGTCCTCCACACAGTTTAACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGAAAAAGACCCACCTTCTATGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAACAGCCCTTATTTTGGAATGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGCCTGATCAACAATTCCGTGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTTTTCCAATGGAGCCATTCTGGACTACGAGATCAAGTACTATGAGAAAGTCTACCCACGGATAGCGCCGGCA  666

Query    1  ----------------------------ATGA-AAG-------ACTC-TCCATTTCAAGTGACAAA------AC  31
                                        |||| .||       |||| ||||   ||||...||||      |.
Sbjct  667  TTTTGGCACTACCTGCGGGTAGAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAG  737

Query   32  TGT-------ACTGG-CTTAA--------------------------------TGAAAAGTGGGAC----TTTA  61
            |||       ||.|| |||||                                |||.||.||.|||    |..|
Sbjct  738  TGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACA  811

Query   62  TTGCCT-CAG--------------------------------CTTCTGACATGGCAGCAGAACAAGGACAGATT  102
            .||.|| |||                                ||||||||||||||||||||||||||||||||
Sbjct  812  GTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATT  885

Query  103  CTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGG  176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  886  CTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGG  959

Query  177  GAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATT  250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  960  GAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATT  1033

Query  251  TGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTT  324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  TGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTT  1107

Query  325  GCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAG  398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  GCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAG  1181

Query  399  TGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATC  472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182  TGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATC  1255

Query  473  GGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAA  546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256  GGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAA  1329

Query  547  GGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTT  620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330  GGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTT  1403

Query  621  TTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGAC  694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404  TTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGAC  1477

Query  695  CAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTC  768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478  CAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTC  1551

Query  769  ACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGT  842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552  ACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGT  1625

Query  843  TCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCT  916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626  TCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCT  1699

Query  917  CCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG---------ACCTCTT-------------  968
            |||||||||||||||||||||||||||||||||||||||||||||         .||.|.|             
Sbjct 1700  CCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCC  1773

Query  969  CCAAA--------CTCTA---ACACTTAACCTC----------------TGCTAT-------------------  996
            |||.|        | |||   |.|.||..||||                .|||||                   
Sbjct 1774  CCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGG  1846

Query  997  --------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG---AC  1045
                    |.||.|.|.|     |..||.||||     |.||||..|    |||||||..|..||||||   ||
Sbjct 1847  TCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTAC  1920

Query 1046  A-------------------------------------------------------------------------  1046
            |                                                                         
Sbjct 1921  AGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAA  1994

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1995  TCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCC  2068

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 2069  TGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGT  2142

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 2143  GACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCT  2216

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 2217  GATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCA  2290

Query 1047  -----------------------------------------------------------  1046
                                                                       
Sbjct 2291  GCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA  2349

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