Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006214.1
- Aligned Length:
- 2353
- Identities:
- 1006
- Gaps:
- 1311
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAAACATATCCATTAAATGGGCTTGCAGACCAGGATTCTATAAAGCTTTTGCTGGGAACACAAAATGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAAATGTCCTCCACACAGTTTAACATACATGGAAGCAACTTCTGTCTGTCAGTGTGAAAAGGGTTATTTCCGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAAAAAGACCCACCTTCTATGGCATGTACCAGGCCACCTTCAGCTCCTAGGAATGTGGTTTTTAACATCAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACAGCCCTTATTTTGGAATGGAGCCCACCAAGTGACACAGGAGGGAGAAAAGATCTCACATACAGTGTAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGTAAGAAATGTGGCTTAGACACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGCCTGATCAACAATTCCGTGATAGTACTTGACTTTGTGTCTCACGTGAATTACACCTTTGAAATAGAAGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGAATGGAGTTTCTGAGTTGAGTTTTTCTCCCAAGCCATTCACAGCTATTACAGTGACCACGGATCAAGATGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTTCCCTGATAGGTGTGGTAAGGAAGGACTGGGCATCCCAAAATAGCATTGCCCTATCATGGCAAGCACCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTTTTCCAATGGAGCCATTCTGGACTACGAGATCAAGTACTATGAGAAAGTCTACCCACGGATAGCGCCGGCA 666
Query 1 ----------------------------ATGA-AAG-------ACTC-TCCATTTCAAGTGACAAA------AC 31
|||| .|| |||| |||| ||||...|||| |.
Sbjct 667 TTTTGGCACTACCTGCGGGTAGAAGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAG 737
Query 32 TGT-------ACTGG-CTTAA--------------------------------TGAAAAGTGGGAC----TTTA 61
||| ||.|| ||||| |||.||.||.||| |..|
Sbjct 738 TGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACA 811
Query 62 TTGCCT-CAG--------------------------------CTTCTGACATGGCAGCAGAACAAGGACAGATT 102
.||.|| ||| ||||||||||||||||||||||||||||||||
Sbjct 812 GTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATT 885
Query 103 CTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 CTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGG 959
Query 177 GAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATT 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATT 1033
Query 251 TGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTT 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 TGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTT 1107
Query 325 GCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAG 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 GCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAG 1181
Query 399 TGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATC 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATC 1255
Query 473 GGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAA 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 GGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAA 1329
Query 547 GGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTT 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTT 1403
Query 621 TTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGAC 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 TTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGAC 1477
Query 695 CAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478 CAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTC 1551
Query 769 ACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGT 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 ACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGT 1625
Query 843 TCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCT 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 TCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCT 1699
Query 917 CCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG---------ACCTCTT------------- 968
||||||||||||||||||||||||||||||||||||||||||||| .||.|.|
Sbjct 1700 CCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCC 1773
Query 969 CCAAA--------CTCTA---ACACTTAACCTC----------------TGCTAT------------------- 996
|||.| | ||| |.|.||..|||| .|||||
Sbjct 1774 CCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGG 1846
Query 997 --------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG---AC 1045
|.||.|.|.| |..||.|||| |.||||..| |||||||..|..|||||| ||
Sbjct 1847 TCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTAC 1920
Query 1046 A------------------------------------------------------------------------- 1046
|
Sbjct 1921 AGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAA 1994
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1995 TCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCC 2068
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2069 TGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGT 2142
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2143 GACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCT 2216
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 2217 GATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCA 2290
Query 1047 ----------------------------------------------------------- 1046
Sbjct 2291 GCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGGATTTCATGTA 2349
