Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006215.1
- Aligned Length:
- 1786
- Identities:
- 1006
- Gaps:
- 744
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGTCACAATGGAGAATCCAAGGCAGAGTGGAACTTCCCAGCCTCAGAAAGGCAGAAACCAGGAAAGCTAA 74
Query 1 -----------------------------------------------------ATGA-AAG-------ACTC-T 12
|||| .|| |||| |
Sbjct 75 GGTCTACCCACGGATAGCGCCGGCATTTTGGCACTACCTGCGGGTAGAAGAACATGAGCAGCTGACCTACTCTT 148
Query 13 CCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA---------------------------- 44
||| ||||...|||| |.||| ||.|| |||||
Sbjct 149 CCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAAGCCAGCCACCAAATATGTATTTCACATC 219
Query 45 ----TGAAAAGTGGGAC----TTTATTGCCT-CAG--------------------------------CTTCTGA 77
|||.||.||.||| |..|.||.|| ||| |||||||
Sbjct 220 CGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTGAATTTGAAACAGGAGATGAAACTTCTGA 293
Query 78 CATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 CATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCTGTTGGCGGATTCACTCTCCTCGTCATCC 367
Query 152 TCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGA 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 TCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAAAGCCAAGATGAAGTCAGAAGAGAAGAGA 441
Query 226 AGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAACTTACATTGATCCAGATACATATGAAGA 515
Query 300 CCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGG 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 CCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCAAGAATTCGTATTGAGAGAGTCATTGGGG 589
Query 374 CAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAA 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 CAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGGGAAAAGAGAGATCCCAGTTGCCATTAAA 663
Query 448 ACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGA 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 ACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAAGAGAAGCTAGTATCATGGGCCAGTTTGA 737
Query 522 CCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTT 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 CCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCCTTCCCGGCCATTGGGGTGGAGGCGTTTT 811
Query 596 GCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTG 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCCGCATCCAGTGCCAGGGGGAGGATCTTTG 885
Query 670 CCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTT 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 CCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAATATATGGAGAATGGATCCCTAGACTCCTT 959
Query 744 TTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGA 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGAATGCTCCGAGGCATTGCATCAGGCATGA 1033
Query 818 AGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTA 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 AGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCGGAATATACTGGTCAATAGCAACTTAGTA 1107
Query 892 TGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTG---- 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 TGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATCCAGAAGCTGCTTATACAACAACTGGTGG 1181
Query 962 -----ACCTCTT-------------CCAAA--------CTCTA---ACACTTAACCTC---------------- 990
.||.|.| |||.| | ||| |.|.||..||||
Sbjct 1182 AAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAGAAAATTCTCCTCAGCAAGCGATGCATGG 1254
Query 991 TGCTAT---------------------------TCTGCATAAA-----TTCTGAGAAA-----AGCCAAATT-- 1025
.||||| |.||.|.|.| |..||.|||| |.||||..|
Sbjct 1255 AGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGACCTTATTGGGAAATGTCTAACCAAGATGT 1328
Query 1026 --TTCTGTCGGTCTAAGAAG---ACA------------------------------------------------ 1046
|||||||..|..|||||| |||
Sbjct 1329 CATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGCTGTCCAGCATCTCTACACCAGCTGATGC 1402
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1403 TCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGACAAACTGATC 1476
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1477 CGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGA 1550
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1551 ATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAGATGGGGCAATACAAGAATAACTTCGTGG 1624
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1625 CAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGATGACATTAGAAGAATTGGAGTCATACTT 1698
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1699 ATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTTTACACATGATGCACATACAGGAGAAGGG 1772
Query 1047 ---------- 1046
Sbjct 1773 ATTTCATGTA 1782
