Nucleotide Global Alignment
Description
- Query:
- TRCN0000489808
- Subject:
- XM_017006217.1
- Aligned Length:
- 1666
- Identities:
- 1006
- Gaps:
- 624
Alignment
Query 1 -------ATGA-AAG-------ACTC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA 44
|||| .|| |||| |||| ||||...|||| |.||| ||.|| |||||
Sbjct 1 ATGGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAA 71
Query 45 --------------------------------TGAAAAGTGGGAC----TTTATTGCCT-CAG----------- 70
|||.||.||.||| |..|.||.|| |||
Sbjct 72 GCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTG 145
Query 71 ---------------------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 AATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT 219
Query 124 GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA 293
Query 198 AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA 367
Query 272 CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA 441
Query 346 AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG 515
Query 420 GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA 589
Query 494 GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCC 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCC 663
Query 568 TTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCC 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 TTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCC 737
Query 642 GCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAAT 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 GCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAAT 811
Query 716 ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA 885
Query 790 ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG 959
Query 864 GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC 1033
Query 938 CAGAAGCTGCTTATACAACAACTG---------ACCTCTT-------------CCAAA--------CTCTA--- 978
|||||||||||||||||||||||| .||.|.| |||.| | |||
Sbjct 1034 CAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAG 1106
Query 979 ACACTTAACCTC----------------TGCTAT---------------------------TCTGCATAAA--- 1006
|.|.||..|||| .||||| |.||.|.|.|
Sbjct 1107 AAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGAC 1180
Query 1007 --TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG---ACA-------------------- 1046
|..||.|||| |.||||..| |||||||..|..|||||| |||
Sbjct 1181 CTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGC 1254
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1255 TGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGA 1328
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1329 CATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAA 1402
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1403 TGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAG 1476
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1477 ATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGA 1550
Query 1047 -------------------------------------------------------------------------- 1046
Sbjct 1551 TGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTT 1624
Query 1047 -------------------------------------- 1046
Sbjct 1625 TACACATGATGCACATACAGGAGAAGGGATTTCATGTA 1662
