Nucleotide Global Alignment

Description

Query:
TRCN0000489808
Subject:
XM_017006218.1
Aligned Length:
1666
Identities:
1006
Gaps:
624

Alignment

Query    1  -------ATGA-AAG-------ACTC-TCCATTTCAAGTGACAAA------ACTGT-------ACTGG-CTTAA  44
                   |||| .||       |||| ||||   ||||...||||      |.|||       ||.|| |||||
Sbjct    1  ATGGAACATGAGCAGCTGACCTACTCTTCCA---CAAGGTCCAAAGCCCCCAGTGTCATCATCACAGGTCTTAA  71

Query   45  --------------------------------TGAAAAGTGGGAC----TTTATTGCCT-CAG-----------  70
                                            |||.||.||.|||    |..|.||.|| |||           
Sbjct   72  GCCAGCCACCAAATATGTATTTCACATCCGAGTGAGAACTGCGACAGGATACAGTGGCTACAGTCAGAAATTTG  145

Query   71  ---------------------CTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT  123
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  146  AATTTGAAACAGGAGATGAAACTTCTGACATGGCAGCAGAACAAGGACAGATTCTCGTGATAGCCACCGCCGCT  219

Query  124  GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA  197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  220  GTTGGCGGATTCACTCTCCTCGTCATCCTCACTTTATTCTTCTTGATCACTGGGAGATGTCAGTGGTACATAAA  293

Query  198  AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA  271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  294  AGCCAAGATGAAGTCAGAAGAGAAGAGAAGAAACCACTTACAGAATGGGCATTTGCGCTTCCCGGGAATTAAAA  367

Query  272  CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  368  CTTACATTGATCCAGATACATATGAAGACCCATCCCTAGCAGTCCATGAATTTGCAAAGGAGATTGATCCCTCA  441

Query  346  AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  442  AGAATTCGTATTGAGAGAGTCATTGGGGCAGGTGAATTTGGAGAAGTCTGTAGTGGGCGTTTGAAGACACCAGG  515

Query  420  GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA  493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  516  GAAAAGAGAGATCCCAGTTGCCATTAAAACTTTGAAAGGTGGCCACATGGATCGGCAAAGAAGAGATTTTCTAA  589

Query  494  GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCC  567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  590  GAGAAGCTAGTATCATGGGCCAGTTTGACCATCCAAACATCATTCGCCTAGAAGGGGTTGTCACCAAAAGATCC  663

Query  568  TTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCC  641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  664  TTCCCGGCCATTGGGGTGGAGGCGTTTTGCCCCAGCTTCCTGAGGGCAGGGTTTTTAAATAGCATCCAGGCCCC  737

Query  642  GCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAAT  715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  738  GCATCCAGTGCCAGGGGGAGGATCTTTGCCCCCCAGGATTCCTGCTGGCAGACCAGTAATGATTGTGGTGGAAT  811

Query  716  ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA  789
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  812  ATATGGAGAATGGATCCCTAGACTCCTTTTTGCGGAAGCATGATGGCCACTTCACAGTCATCCAGTTGGTCGGA  885

Query  790  ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG  863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  886  ATGCTCCGAGGCATTGCATCAGGCATGAAGTATCTTTCTGATATGGGTTATGTTCATCGAGACCTAGCGGCTCG  959

Query  864  GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC  937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  960  GAATATACTGGTCAATAGCAACTTAGTATGCAAAGTTTCTGATTTTGGTCTCTCCAGAGTGCTGGAAGATGATC  1033

Query  938  CAGAAGCTGCTTATACAACAACTG---------ACCTCTT-------------CCAAA--------CTCTA---  978
            ||||||||||||||||||||||||         .||.|.|             |||.|        | |||   
Sbjct 1034  CAGAAGCTGCTTATACAACAACTGGTGGAAAAATCCCCATAAGGTGGACAGCCCCAGAAGCCATCGC-CTACAG  1106

Query  979  ACACTTAACCTC----------------TGCTAT---------------------------TCTGCATAAA---  1006
            |.|.||..||||                .|||||                           |.||.|.|.|   
Sbjct 1107  AAAATTCTCCTCAGCAAGCGATGCATGGAGCTATGGCATTGTCATGTGGGAGGTCATGTCCTATGGAGAGAGAC  1180

Query 1007  --TTCTGAGAAA-----AGCCAAATT----TTCTGTCGGTCTAAGAAG---ACA--------------------  1046
              |..||.||||     |.||||..|    |||||||..|..||||||   |||                    
Sbjct 1181  CTTATTGGGAAATGTCTAACCAAGATGTCATTCTGTCCATTGAAGAAGGGTACAGACTTCCAGCTCCCATGGGC  1254

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1255  TGTCCAGCATCTCTACACCAGCTGATGCTCCACTGCTGGCAGAAGGAGAGAAATCACAGACCAAAATTTACTGA  1328

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1329  CATTGTCAGCTTCCTTGACAAACTGATCCGAAATCCCAGTGCCCTTCACACCCTGGTGGAGGACATCCTTGTAA  1402

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1403  TGCCAGAGTCCCCTGGTGAAGTTCCGGAATATCCTTTGTTTGTCACAGTTGGTGACTGGCTAGATTCTATAAAG  1476

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1477  ATGGGGCAATACAAGAATAACTTCGTGGCAGCAGGGTTTACAACATTTGACCTGATTTCAAGAATGAGCATTGA  1550

Query 1047  --------------------------------------------------------------------------  1046
                                                                                      
Sbjct 1551  TGACATTAGAAGAATTGGAGTCATACTTATTGGACACCAGAGACGAATAGTCAGCAGCATACAGACTTTACGTT  1624

Query 1047  --------------------------------------  1046
                                                  
Sbjct 1625  TACACATGATGCACATACAGGAGAAGGGATTTCATGTA  1662

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