Nucleotide Global Alignment
Description
- Query:
- TRCN0000489818
- Subject:
- XR_001750187.1
- Aligned Length:
- 2596
- Identities:
- 1385
- Gaps:
- 1185
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGGTGCTCCCACTTAGAGGTCACGCGCGGCGTCGGGCGTTCCTGAGACCGTCGGGCTCCCTGGCTCGGTCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGGCTCAGGCACTACTCCCCTCTACCCTCCTCTCGGTCTTTAAAAGGAAGAAGGGGCTTATCGTTAAGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGTGATCTTTTCAGTTTCTCCAGCTGCTGGCTTTTTGGACACCCACTCCCCCGCCAGGAGGCAGTTGCAAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGGCTGCGAGAAATAACTGCCTCTTGAAACTTGCAGGGCGAAGAGCAGGCGGCGAGCGCTGGGCCGGGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACCACCCGAGCTGCGACGGGCTCTGGGGCTGCGGGGCAGGGCTGGCGCCCGGAGCCTGAGCTGCAGGAGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCTCGCTTTCCTCAACAGGTGGCGGCGGGGCGCGCGCCGGGAGACCCCCCCTAATGCGGGAAAAGCACGTGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCATTTTAGAGAAGGCAAGGCCGGTGTGTTTATCTGCAAGCCATTATACTTGCCCACGAATCTTTGAGAACAT 518
Query 1 ---------------------------------------------------------ATGGATATAAAAAACTC 17
|||||||||||||||||
Sbjct 519 TATAATGACCTTTGTGCCTCTTCTTGCAAGGTGTTTTCTCAGCTGTTATCTCAAGACATGGATATAAAAAACTC 592
Query 18 ACCATCTAGCCTTAATTCTCCTTCCTCCTACAACTGCAGTCAATCCATCTTACCCCTGGAGCACGGCTCCATAT 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCATCTAGCCTTAATTCTCCTTCCTCCTACAACTGCAGTCAATCCATCTTACCCCTGGAGCACGGCTCCATAT 666
Query 92 ACATACCTTCCTCCTATGTAGACAGCCACCATGAATATCCAGCCATGACATTCTATAGCCCTGCTGTGATGAAT 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACATACCTTCCTCCTATGTAGACAGCCACCATGAATATCCAGCCATGACATTCTATAGCCCTGCTGTGATGAAT 740
Query 166 TACAGCATTCCCAGCAATGTCACTAACTTGGAAGGTGGGCCTGGTCGGCAGACCACAAGCCCAAATGTGTTGTG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TACAGCATTCCCAGCAATGTCACTAACTTGGAAGGTGGGCCTGGTCGGCAGACCACAAGCCCAAATGTGTTGTG 814
Query 240 GCCAACACCTGGGCACCTTTCTCCTTTAGTGGTCCATCGCCAGTTATCACATCTGTATGCGGAACCTCAAAAGA 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCAACACCTGGGCACCTTTCTCCTTTAGTGGTCCATCGCCAGTTATCACATCTGTATGCGGAACCTCAAAAGA 888
Query 314 GTCCCTGGTGTGAAGCAAGATCGCTAGAACACACCTTACCTGTAAACAGAGAGACACTGAAAAGGAAGGTTAGT 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTCCCTGGTGTGAAGCAAGATCGCTAGAACACACCTTACCTGTAAACAGAGAGACACTGAAAAGGAAGGTTAGT 962
Query 388 GGGAACCGTTGCGCCAGCCCTGTTACTGGTCCAGGTTCAAAGAGGGATGCTCACTTCTGCGCTGTCTGCAGCGA 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGAACCGTTGCGCCAGCCCTGTTACTGGTCCAGGTTCAAAGAGGGATGCTCACTTCTGCGCTGTCTGCAGCGA 1036
Query 462 TTACGCATCGGGATATCACTATGGAGTCTGGTCGTGTGAAGGATGTAAGGCCTTTTTTAAAAGAAGCATTCAAG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTACGCATCGGGATATCACTATGGAGTCTGGTCGTGTGAAGGATGTAAGGCCTTTTTTAAAAGAAGCATTCAAG 1110
Query 536 GACATAATGATTATATTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGCTGCCAGGCC 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACATAATGATTATATTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGCTGCCAGGCC 1184
Query 610 TGCCGACTTCGGAAGTGTTACGAAGTGGGAATGGTGAAGTGTGGCTCCCGGAGAGAGAGATGTGGGTACCGCCT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCCGACTTCGGAAGTGTTACGAAGTGGGAATGGTGAAGTGTGGCTCCCGGAGAGAGAGATGTGGGTACCGCCT 1258
Query 684 TGTGCGGAGACAGAGAAGTGCCGACGAGCAGCTGCACTGTGCCGGCAAGGCCAAGAGAAGTGGCGGCCACGCGC 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGTGCGGAGACAGAGAAGTGCCGACGAGCAGCTGCACTGTGCCGGCAAGGCCAAGAGAAGTGGCGGCCACGCGC 1332
Query 758 CCCGAGTGCGGGAGCTGCTGCTGGACGCCCTGAGCCCCGAGCAGCTAGTGCTCACCCTCCTGGAGGCTGAGCCG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCGAGTGCGGGAGCTGCTGCTGGACGCCCTGAGCCCCGAGCAGCTAGTGCTCACCCTCCTGGAGGCTGAGCCG 1406
Query 832 CCCCATGTGCTGATCAGCCGCCCCAGTGCGCCCTTCACCGAGGCCTCCATGATGATGTCCCTGACCAAGTTGGC 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCCCATGTGCTGATCAGCCGCCCCAGTGCGCCCTTCACCGAGGCCTCCATGATGATGTCCCTGACCAAGTTGGC 1480
Query 906 CGACAAGGAGTTGGTACACATGATCAGCTGGGCCAAGAAGATTCCCGGCTTTGTGGAGCTCAGCCTGTTCGACC 979
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGACAAGGAGTTGGTACACATGATCAGCTGGGCCAAGAAGATTCCC---------------------------- 1526
Query 980 AAGTGCGGCTCTTGGAGAGCTGTTGGATGGAGGTGTTAATGATGGGGCTGATGTGGCGCTCAATTGACCACCCC 1053
Sbjct 1527 -------------------------------------------------------------------------- 1526
Query 1054 GGCAAGCTCATCTTTGCTCCAGATCTTGTTCTGGACAGGGATGAGGGGAAATGCGTAGAAGGAATTCTGGAAAT 1127
|||||||||||||||||||||||||||||||||||||
Sbjct 1527 -------------------------------------GGGATGAGGGGAAATGCGTAGAAGGAATTCTGGAAAT 1563
Query 1128 CTTTGACATGCTCCTGGCAACTACTTCAAGGTTTCGAGAGTTAAAACTCCAACACAAAGAATATCTCTGTGTCA 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 CTTTGACATGCTCCTGGCAACTACTTCAAGGTTTCGAGAGTTAAAACTCCAACACAAAGAATATCTCTGTGTCA 1637
Query 1202 AGGCCATGATCCTGCTCAATTCCAGTATGTACCCTCTGGTCACAGCGACCCAGGATGCTGACAGCAGCCGGAAG 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 AGGCCATGATCCTGCTCAATTCCAGTATGTACCCTCTGGTCACAGCGACCCAGGATGCTGACAGCAGCCGGAAG 1711
Query 1276 CTGGCTCACTTGCTGAACGCCGTGACCGATGCTTTGGTTTGGGTGATTGCCAAGAGCGGCATCTCCTCCCAGCA 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 CTGGCTCACTTGCTGAACGCCGTGACCGATGCTTTGGTTTGGGTGATTGCCAAGAGCGGCATCTCCTCCCAGCA 1785
Query 1350 GCAATCCATGCGCCTGGCTAACCTCCTGATGCTCCTGTCCCACGTCAGGCATGCGAG----TAACAAGGGC--- 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .|| ||||.|
Sbjct 1786 GCAATCCATGCGCCTGGCTAACCTCCTGATGCTCCTGTCCCACGTCAGGCATGCGAGGGCAGAA-AAGGCCTCT 1858
Query 1417 ------------------------------------------------------ATGGAACA-------TCTGC 1429
|||||.|| |||..
Sbjct 1859 CAAACACTCACCTCATTTGGAATGAAGATGGAGACTCTTTTGCCTGAAGCAACGATGGAGCAGTGACCCTCTAA 1932
Query 1430 TCAA--------CATGAAGTGCAAAAATGT--GGTCCCAGT---------GTATGACCTGCTGCTGGAGATGC- 1483
|||| |.|.||| ||||||.| |||..||.| || |..||| |||| ||| |
Sbjct 1933 TCAACTCGGTGGCCTAAAG---AAAAATCTTGGGTAACATTTTCACTTCAGT-TTCCCT----CTGG-GAT-CA 1996
Query 1484 -TG-AATGCCCACG------------------------------TGCTTCGCGGGTGCAAGT------------ 1513
|| ||| |||.| |.|||.| ||||
Sbjct 1997 TTGTAAT--CCATGAAAAAAATAATTTTAAAGAAAGAGTTAAAATACTTTG-------AAGTTAGTTATGTGGT 2061
Query 1514 ------CCTCC------------ATCACGGGGTCCGAGTGCAGCCCGGCA----GAGGACAGTAAAAGC-AAAG 1564
||.|| |||| .|||.| || ||..||.|||||.|| ||||
Sbjct 2062 TAAAAACCACCTTCCTTTCTATTATCA----ATCCAA-----------CAATTTGATAACTGTAAACGCTAAAG 2120
Query 1565 ---------------------------------------AGGGCTCCCAGA------ACCCACAGTCTCAG--- 1590
||||||..|||| ||||| |.||
Sbjct 2121 TGAAGACGGATTCTCTTCAGATGGTCTCCTTAACTGCCCAGGGCTTGCAGATGTCTCACCCA-----TGAGGGG 2189
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2190 CACCAATGTAGAAAGCTGAGGCTTCATCTACTGATGAGCTTCACTGGTTTCCCCTGAGGTTTGTGCTTTGGCAG 2263
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2264 AGAAGGGGAGGAGGGGACTGGGATTGTGTGGTCAGCTGTGCCTGCCAACAGATGCAGGTTAGGAACTGTGTTCA 2337
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2338 GTATCTTCCAATAAGAAAGGGGAAATGCCGATGCCTATCCTCTTTGTTTAGGTAGAAAGTAAAATGCTACTGGA 2411
Query 1591 ------ 1590
Sbjct 2412 CTTAAA 2417
