Nucleotide Global Alignment
Description
- Query:
- TRCN0000489864
- Subject:
- XM_017319954.1
- Aligned Length:
- 2983
- Identities:
- 1652
- Gaps:
- 1168
Alignment
Query 1 ATGGTTTTTCAAACTCGGTACCCTTCATGGATTATTTTATGCTACATCTGGCTGCTCCGCTTTGCACACACAGG 74
||||||.||||||||||||.||||||.|||||||||||.||.||||||||||||||..|||||||||||||.||
Sbjct 1 ATGGTTGTTCAAACTCGGTTCCCTTCGTGGATTATTTTGTGTTACATCTGGCTGCTTGGCTTTGCACACACGGG 74
Query 75 GGAGGCGCAGGCTGCGAAGGAAGTACTACTGCTGGATTCTAAAGCACAACAAACAGAGTTGGAGTGGATTTCCT 148
||||||||||||||||||||||||||||.|.|||||.||.|||||||||||||||||.|||||.||||||||||
Sbjct 75 GGAGGCGCAGGCTGCGAAGGAAGTACTATTACTGGACTCGAAAGCACAACAAACAGAATTGGAATGGATTTCCT 148
Query 149 CTCCACCCAATGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTATACCCCGATACGAACATACCAGGTGTGC 222
|||||||||.||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||||
Sbjct 149 CTCCACCCAGTGGGTGGGAAGAAATTAGTGGTTTGGATGAGAACTACACTCCGATAAGAACATACCAGGTGTGC 222
Query 223 CAAGTCATGGAGCCCAACCAAAACAACTGGCTGCGGACTAACTGGATTTCCAAAGGCAATGCACAAAGGATTTT 296
||.|||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 223 CAGGTCATGGAGCCCAACCAGAACAACTGGCTGCGGACTAACTGGATTTCTAAAGGCAACGCACAAAGGATTTT 296
Query 297 TGTAGAATTGAAATTCACCCTGAGGGATTGTAACAGTCTTCCTGGAGTACTGGGAACTTGCAAGGAAACATTTA 370
|||||||||||||||||||.|||||||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct 297 TGTAGAATTGAAATTCACCTTGAGGGATTGTAATAGTCTTCCCGGAGTCCTGGGAACTTGCAAGGAAACGTTTA 370
Query 371 ATTTGTACTATTATGAAACAGACTATGACACTGGCAGGAATATAAGAGAAAACCTCTATGTAAAAATAGACACC 444
|||||||||||||||||||||||||.|||||.||||||||||||.||||||||||.|||||.||||||||||||
Sbjct 371 ATTTGTACTATTATGAAACAGACTACGACACCGGCAGGAATATACGAGAAAACCTTTATGTTAAAATAGACACC 444
Query 445 ATTGCTGCAGATGAAAGTTTTACCCAAGGTGACCTTGGTGAAAGAAAGATGAAGCTTAACACTGAGGTGAGAGA 518
||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 445 ATTGCTGCAGATGAAAGTTTCACACAAGGTGACCTTGGTGAAAGAAAGATGAAGCTGAACACTGAGGTGAGAGA 518
Query 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCTTTGGTTTCTG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 519 GATTGGACCTTTGTCCAAAAAGGGATTCTATCTTGCCTTTCAGGATGTAGGGGCTTGCATAGCATTGGTTTCTG 592
Query 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTATTGAGAACTTAGCTATCTTTCCAGATACAGTGACTGGTTCA 666
||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||.
Sbjct 593 TCAAAGTGTACTACAAGAAGTGCTGGTCCATTGTTGAGAACTTAGCTGTCTTTCCAGATACAGTGACTGGTTCG 666
Query 667 GAATTTTCCTCTTTAGTCGAGGTTCGAGGGACATGTGTCAGCAGTGCAGAGGAAGAAGCGGAAAACGCCCCCAG 740
|||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||.||.|||||..|||||||
Sbjct 667 GAATTTTCCTCCTTAGTCGAGGTCCGTGGGACATGTGTCAGCAGTGCCGAGGAAGAGGCAGAAAATTCCCCCAG 740
Query 741 GATGCACTGCAGTGCAGAAGGAGAATGGTTAGTGCCCATTGGAAAATGTATCTGCAAAGCAGGCTACCAGCAAA 814
.|||||.|||||||||||||||||.|||.||||.||||||||||||||.|||||||||||||||||.|||||||
Sbjct 741 AATGCATTGCAGTGCAGAAGGAGAGTGGCTAGTACCCATTGGAAAATGCATCTGCAAAGCAGGCTATCAGCAAA 814
Query 815 AAGGAGACACTTGTGAACCCTGTGGCCGTGGGTTCTACAAGTCTTCCTCTCAAGATCTTCAGTGCTCTCGTTGT 888
||||.||||||||.||||||||||||||..||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct 815 AAGGGGACACTTGCGAACCCTGTGGCCGCAGGTTCTACAAATCTTCCTCTCAGGATCTCCAGTGTTCTCGTTGT 888
Query 889 CCAACTCACAGTTTTTCTGATAAAGAAGGCTCCTCCAGATGTGAATGTGAAGATGGGTATTACAGGGCTCCATC 962
|||||.|||||.||.|||||...||||||.||.|||||.||||||||||||||||||||.|||||.|||||.||
Sbjct 889 CCAACCCACAGCTTCTCTGACCGAGAAGGATCATCCAGGTGTGAATGTGAAGATGGGTACTACAGAGCTCCTTC 962
Query 963 TGACCCACCATACGTTGCATGCACAAGGCCTCCATCTGCACCACAGAACCTCATTTTCAACATCAACCAAACCA 1036
|||.||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||.|||||.|
Sbjct 963 TGATCCACCATACGTTGCATGCACGAGGCCTCCCTCTGCACCACAGAACCTTATTTTCAATATCAATCAAACGA 1036
Query 1037 CAGTAAGTTTGGAATGGAGTCCTCCTGCAGACAATGGGGGAAGAAACGATGTGACCTACAGAATATTGTGTAAG 1110
|.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||||.||||||||
Sbjct 1037 CTGTAAGTTTGGAATGGAGTCCTCCGGCTGACAACGGGGGAAGAAACGATGTCACCTACAGAATACTGTGTAAG 1110
Query 1111 CGGTGCAGTTGGGAGCAGGGCGAATGTGTTCCCTGTGGGAGTAACATTGGATACATGCCCCAGCAGACTGGATT 1184
||||||||||||||.|||||.||||||||.||.||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1111 CGGTGCAGTTGGGAACAGGGAGAATGTGTGCCATGCGGAAGTAACATTGGATACATGCCCCAGCAGACGGGATT 1184
Query 1185 AGAGGATAACTATGTCACTGTCATGGACCTGCTAGCCCACGCTAATTATACTTTTGAAGTTGAAGCTGTAAATG 1258
||||||||||||||||||||||||||||||.||.|||||.||.|||||.|||||.|||||||||||||||||||
Sbjct 1185 AGAGGATAACTATGTCACTGTCATGGACCTACTTGCCCATGCAAATTACACTTTCGAAGTTGAAGCTGTAAATG 1258
Query 1259 GAGTTTCTGACTTAAGCCGATCCCAGAGGCTCTTTGCTGCTGTCAGTATCACCACTGGTCAAGCAGCTCCCTCG 1332
|||||||.|||||||||.||||||||||||||||.||||||||.||.||||||||.||||||||||||||||||
Sbjct 1259 GAGTTTCGGACTTAAGCAGATCCCAGAGGCTCTTCGCTGCTGTTAGCATCACCACCGGTCAAGCAGCTCCCTCG 1332
Query 1333 CAAGTGAGCGGAGTAATGAAGGAGAGAGTACTGCAGCGGAGTGTCGAGCTTTCCTGGCAGGAACCAGAGCATCC 1406
||||||||.|||||.|||||||||.|||||||||||||||||||..||||||||||||||||.||.||||||||
Sbjct 1333 CAAGTGAGTGGAGTCATGAAGGAGCGAGTACTGCAGCGGAGTGTGCAGCTTTCCTGGCAGGAGCCGGAGCATCC 1406
Query 1407 CAATGGAGTCATCACAGAATATGAAATCAAGTATTACGAGAAAGATCAAAGGGAACGGACCTACTCAACAGTAA 1480
|||||||||||||||.||||||||||||||||||||.||||||||||||.|||||.||||.|||||||||.|.|
Sbjct 1407 CAATGGAGTCATCACGGAATATGAAATCAAGTATTATGAGAAAGATCAACGGGAAAGGACGTACTCAACACTCA 1480
Query 1481 AAACCAAGTCTACTTCAGCCTCCATTAATAATCTGAAACCAGGAACAGTGTATGTTTTCCAGATTCGGGCTTTT 1554
||||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.|||||..|.
Sbjct 1481 AAACCAAGTCCACCTCCGCCTCCATTAATAATCTGAAACCGGGAACAGTGTACGTCTTTCAGATCCGGGCGGTC 1554
Query 1555 ACTGCTGCTGGTTATGGAAATTACAGTCCCAGACTTGATGTTGCTACACTAGAGGAAGCTACAGGTAAAATGTT 1628
||||||||.|||||||||||.|||||.||.||.|||||||||||.|||||.|||||||||.|
Sbjct 1555 ACTGCTGCCGGTTATGGAAACTACAGCCCTAGGCTTGATGTTGCCACACTTGAGGAAGCTTC------------ 1616
Query 1629 TGAAGCTACAGCTGTCTCCAGTGAACAGAATCCTGTTATTATCATTGCTGTGGTTGCTGTAGCTGGGACCATCA 1702
|||.|||||.|||||||||||||||||||||||.||.||.||||||||.||.||||||||.||||||||||
Sbjct 1617 ---AGCGACAGCAGTCTCCAGTGAACAGAATCCTGTCATCATAATTGCTGTAGTGGCTGTAGCAGGGACCATCA 1687
Query 1703 TTTTGGTGTTCATGGTCTTTGGCTTCATCATTGGGAGAAGGCACTGTGGTTATAGCAAAGCTGACCAAGAAGGC 1776
|.||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||.
Sbjct 1688 TCTTGGTGTTCATGGTGTTCGGCTTCATCATTGGAAGAAGGCACTGTGGTTATAGCAAGGCTGACCAAGAAGGG 1761
Query 1777 GATGAAGAGCTTTACTTTCATTGCACCAAAACCTACATTGACCCTGAAACCTATGAGGACCCAAATAGAGCTGT 1850
||||||||.||.|||||||||| |.|| .|.|||..|||||.|| ||||
Sbjct 1762 GATGAAGAACTCTACTTTCATT-------------CTTT-----AGTAACAAATGAGCAC----------CTGT 1807
Query 1851 CCATCAATTCGCCAAGGAGCTAGATGCCTCCTGTATTAAAATTGAGCGTGTGATTGGTGCAGGAGAATTCGGTG 1924
|.||.|||
Sbjct 1808 ------------------------------CAGTTTTA------------------------------------ 1815
Query 1925 AAGTCTGCAGTGGCCGTTTGAAACTTCCAGGGAAAAGAGATGTTGCAGTAGCCATAAAAACCCTGAAAGTTGGT 1998
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 1999 TACACAGAAAAACAAAGGAGAGACTTTTTGTGTGAAGCAAGCATCATGGGGCAGTTTGACCACCCAAATGTTGT 2072
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2073 CCATTTGGAAGGGGTTGTTACAAGAGGGAAACCAGTCATGATAGTAATAGAGTTCATGGAAAATGGAGCCCTAG 2146
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2147 ATGCATTTCTCAGGAAACATGATGGGCAATTTACAGTCATTCAGTTAGTAGGAATGCTGAGAGGAATTGCTGCT 2220
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2221 GGAATGAGATATTTGGCTGATATGGGATATGTTCACAGGGACCTTGCAGCTCGCAATATTCTTGTCAACAGCAA 2294
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2295 TCTCGTTTGTAAAGTGTCAGATTTTGGCCTGTCCCGAGTTATAGAGGATGATCCAGAAGCTGTCTATACAACTA 2368
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2369 CTGGTGGAAAAATTCCAGTAAGGTGGACAGCACCCGAAGCCATCCAGTACCGGAAATTCACATCAGCCAGTGAT 2442
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2443 GTATGGAGCTATGGAATAGTCATGTGGGAAGTTATGTCTTATGGAGAAAGACCTTATTGGGACATGTCAAATCA 2516
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2517 AGATGTTATAAAAGCAATAGAAGAAGGTTATCGTTTACCAGCACCCATGGACTGCCCAGCTGGCCTTCACCAGC 2590
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2591 TAATGTTGGATTGTTGGCAAAAGGAGCGTGCTGAAAGGCCAAAATTTGAACAGATAGTTGGAATTCTAGACAAA 2664
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2665 ATGATTCGAAACCCAAATAGTCTGAAAACTCCCCTGGGAACTTGTAGTAGGCCAATAAGCCCTCTTCTGGATTA 2738
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2739 AAACACTCCTGATTTCACTACCTTTTGTTCAGTTGGAGAATGGCTACAAGCTATTAAGATGGAAAGATATAAAG 2812
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2813 ATAATTTCACGGCAGCTGGCTACAATTCCCTTGAATCAGTAGCCAGGATGACTATTGAGGATGTGATGAGTTTA 2886
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2887 GGGATCACACTGGTTGGTCATCAAAAGAAAATCATGAGCAGCATTCAGACTATGAGAGCACAAATGCTACATTT 2960
Sbjct 1816 -------------------------------------------------------------------------- 1815
Query 2961 ACATGGAACTGGCATTCAAGTGG 2983
Sbjct 1816 ----------------------- 1815
