Nucleotide Global Alignment
Description
- Query:
- TRCN0000489880
- Subject:
- NR_132437.1
- Aligned Length:
- 5175
- Identities:
- 1946
- Gaps:
- 3214
Alignment
Query 1 ATGAAGTATTCTTGCTGTGCTCTGGTTTTGGCTGTCCTGGGCACAGAATTGCTGGGAAGCCTCTGTTCGACTGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAGATCCCCGAGGTTCAGAGGACGGATACAGCAGGAACGAAAAAACATCCGACCCAACATTATTCTTGTGCTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCGATGATCAAGATGTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAACGAGAAAGATTATGGAACATGGGGGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCCACCTTCATCAATGCCTTTGTGACTACACCCATGTGCTGCCCGTCACGGTCCTCCATGCTCACCGGGAAGTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGTGCACAATCACAATGTCTACACCAACAACGAGAACTGCTCTTCCCCCTCGTGGCAGGCCATGCATGAGCCTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGACTTTTGCTGTATATCTTAACAACACTGGCTACAGAACAGCCTTTTTTGGAAAATACCTCAATGAATATAAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCAGCTACATCCCCCCTGGGTGGCGAGAATGGCTTGGATTAATCAAGAATTCTCGCTTCTATAATTACACTGT 518
||||
Sbjct 1 -------------------------------------------------------------------ACAC--- 4
Query 519 TTGTCGCAATGGCATCAAAGAAAAGCATGGATTTGATTATGCAAAGGACTACTTCACAGACTTAATCACTAACG 592
.|||| ||| |.|||.||| ||||||
Sbjct 5 --------CTGGC------------CAT-----------TCCAATGGA-------ACAGAC------------- 27
Query 593 AGAGCATTAATTACTTCAAAATGTCTAAGAGAATGTATCCCCATAGGCCCGTTATGATGGTGATCAGCCACGCT 666
||.| |||..|| |||..|| ||.||| |||||
Sbjct 28 AGGG---TAAGGAC--CAATCTG-------GACTGT--------------GTTAT------------------- 56
Query 667 GCGCCCCACGGCCCCGAGGACTCAGCCCCACAGTTTTCTA-----AACTGTACCCCAATGCTTCCCAACACAT- 734
.|||||.| ||.|.| .|||| ||
Sbjct 57 --------------------------------CTTTTCCAGGTGCAAGTAT------GTGCT---------ATG 83
Query 735 -AACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCAATGCTGCCC 807
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 84 GAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCAATGCTGCCC 157
Query 808 ATCCACATGGAATTTACAAACATTCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTGGA 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 158 ATCCACATGGAATTTACAAACATTCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTGGA 231
Query 882 GAGGCTGTATAACATGCTCGTGGAGACGGGGGAGCTGGAGAATACTTACATCATTTACACCGCCGACCATGGTT 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 GAGGCTGTATAACATGCTCGTGGAGACGGGGGAGCTGGAGAATACTTACATCATTTACACCGCCGACCATGGTT 305
Query 956 ACCATATTGGGCAGTTTGGACTGGTCAAGGGGAAATCCATGCCATATGACTTTGATATTCGTGTGCCTTTTTTT 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 306 ACCATATTGGGCAGTTTGGACTGGTCAAGGGGAAATCCATGCCATATGACTTTGATATTCGTGTGCCTTTTTTT 379
Query 1030 ATTCGTGGTCCAAGTGTAGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGCCCCCACGAT 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 380 ATTCGTGGTCCAAGTGTAGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGCCCCCACGAT 453
Query 1104 CCTGGATATTGCTGGGCTCGACACACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGAAA 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 454 CCTGGATATTGCTGGGCTCGACACACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGAAA 527
Query 1178 AGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAAAGAGGCAAA 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 AGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAAAGAGGCAAA 601
Query 1252 TTTCTACGTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGAACGGGTCAA 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 TTTCTACGTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGAACGGGTCAA 675
Query 1326 AGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCATTGAGGATA 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 AGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCATTGAGGATA 749
Query 1400 CATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCACGCGGAAC 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 750 CATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCACGCGGAAC 823
Query 1474 CTCTACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAG 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 CTCTACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAG 897
Query 1548 CCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTC 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTC 971
Query 1622 GGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAATATATGACATAAATCTGGAAGAAGAAGAAGAATTG 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 972 GGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAATATATGACATAAATCTGGAAGAAGAAGAAGAATTG 1045
Query 1696 CAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTC 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1046 CAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTC 1119
Query 1770 CAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGA 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 CAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGA 1193
Query 1844 CACACAAGTGTTTTATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 CACACAAGTGTTTTATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG 1267
Query 1918 AAGGACCATAAGGCATACATTGACAAAGAGATTGAAGCTCTGCAAGATAAAATTAAGAATTTAAGAGAAGTGAG 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1268 AAGGACCATAAGGCATACATTGACAAAGAGATTGAAGCTCTGCAAGATAAAATTAAGAATTTAAGAGAAGTGAG 1341
Query 1992 AGGACATCTGAAGAGAAGGAAGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATTACAATAAAGAGAAAGGTG 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1342 AGGACATCTGAAGAGAAGGAAGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATTACAATAAAGAGAAAGGTG 1415
Query 2066 TAAAAAAGCAAGAGAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAAACTG 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1416 TAAAAAAGCAAGAGAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAAACTG 1489
Query 2140 CAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAAGGGGGAAGA 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 CAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAAGGGGGAAGA 1563
Query 2214 GTGCAGCCTGCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCTGGAACCTGG 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 GTGCAGCCTGCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCTGGAACCTGG 1637
Query 2288 GATCTTTCTGTGCTTGCACGAGTTCTAACAATAACACCTACTGGTGTTTGCGTACAGTTAATGAGACGCATAAT 2361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 GATCTTTCTGTGCTTGCACGAGTTCTAACAATAACACCTACTGGTGTTTGCGTACAGTTAATGAGACGCATAAT 1711
Query 2362 TTTCTTTTCTGTGAGTTTGCTACTGGCTTTTTGGAGTATTTTGATATGAATACAGATCCTTATCAGCTCACAAA 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 TTTCTTTTCTGTGAGTTTGCTACTGGCTTTTTGGAGTATTTTGATATGAATACAGATCCTTATCAGCTCACAAA 1785
Query 2436 TACAGTGCACACGGTAGAACGAGGCATTTTGAATCAGCTACACGTACAACTAATGGAGCTCAGAAGCTGTCAAG 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1786 TACAGTGCACACGGTAGAACGAGGCATTTTGAATCAGCTACACGTACAACTAATGGAGCTCAGAAGCTGTCAAG 1859
Query 2510 GATATAAGCAGTGCAACCCAAGACCTAAGAATCTTGATGTTGGAAATAAAGATGGAGGAAGCTATGACCTACAC 2583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 GATATAAGCAGTGCAACCCAAGACCTAAGAATCTTGATGTTGGAAATAAAGATGGAGGAAGCTATGACCTACAC 1933
Query 2584 AG------------------------------------------------------------------------ 2585
||
Sbjct 1934 AGAATGTTGCTGTTCCTGGTACCCTGTTCGGCCCCTCTAACCTCCAGAGCTATGGTCTCAGATGCTTCCTTTTA 2007
Query 2586 -------------------------------------------------------------------------- 2585
Sbjct 2008 GAGAGAAGGTCATTAGTCCACCAAGAAGCCAAATGACAACAGGAAAGGTGATGGGAAGATGAAAACAAAGGAAG 2081
Query 2586 -----------------------------AGGACAGTTATGGGATGGATGGGAAGGTTAAGC------------ 2618
|||||||||||||||||||||||||||||||.|
Sbjct 2082 GTGGACTTTTGGGTATATGTTATAGCCATAGGACAGTTATGGGATGGATGGGAAGGTTAATCAGCCCCGTCTCA 2155
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2156 CTGCAGACATCAACTGGCAAGGCCTAGAGGAGCTACACAGTGTGAATGAAAACATCTATGAGTACAGACAAAAC 2229
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2230 TACAGACTTAGTCTGGTGGACTGGACTAATTACTTGAAGGATTTAGATAGAGTATTTGCACTGCTGAAGAGTCA 2303
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2304 CTATGAGCAAAATAAAACAAATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACG 2377
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2378 CTGTGTCAATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAACACCTCATTTG 2451
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2452 ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA 2525
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2526 TAACGACATTCCAGAAGTTAATCATTTGAATTCTGAACACTGGAGAAAAACCGAAAAATGGACGGGGCATGAAG 2599
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2600 AGACTAATCATCTGGAAACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAGGCTG 2673
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2674 CAGCCCATTCGCAGGCACCCGAAAGAACTTCCCCAGTATGGTGGTCCTGGAAAGGACATTTTTGAAGATCAACT 2747
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2748 ATATCTTCCTGTGCATTCCGATGGAATTTCAGTTCATCAGATGTTCACCATGGCCACCGCAGAACACCGAAGTA 2821
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2822 ATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAAAAGGAGAAGTCACAGCACCTAGAA 2895
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2896 GGCAGCGCCTCCTCTTCACTCTCCTCTGATTAGATGAAACTGTTACCTTACCCTAAACACAGTATTTCTTTTTA 2969
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 2970 ACTTTTTTATTTGTAAACTAATAAAGGTAATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCA 3043
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3044 GTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGA 3117
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3118 GTAGAAAGAAAGGCTGGGGATATTTGGGTTGGCTTGGTTTTGATTTTTTGCTTGTTTGTTTGTTTTGTACTAAA 3191
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3192 ACAGTATTATCTTTTGAATATCGTAGGGACATAAGTATATACATGTTATCCAATCAAGATGGCTAGAATGGTGC 3265
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3266 CTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATGAAGTTT 3339
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3340 TGATTCATTTTTAACCACTGGAATTTTTCAATGCCGTCATTTTCAGTTAGATGATTTTGCACTTTGAGATTAAA 3413
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3414 ATGCCATGTCTATTTGATTAGTCTTATTTTTTTATTTTTACAGGCTTATCAGTCTCACTGTTGGCTGTCATTGT 3487
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3488 GACAAAGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTTTTGCCAG 3561
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3562 AAAATGTTGCATGTGTTTTACCTCGACTTGCTAAAATCGATTAGCAGAAAGGCATGGCTAATAATGTTGGTGGT 3635
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3636 GAAAATAAATAAATAAGTAAACAAAATGAAGATTGCCTGCTCTCTCTGTGCCTAGCCTCAAAGCGTTCATCATA 3709
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3710 CATCATACCTTTAAGATTGCTATATTTTGGGTTATTTTCTTGACAGGAGAAAAAGATCTAAAGATCTTTTATTT 3783
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3784 TCATCTTTTTTGGTTTTCTTGGCATGACTAAGAAGCTTAAATGTTGATAAAATATGACTAGTTTTGAATTTACA 3857
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3858 CCAAGAACTTCTCAATAAAAGAAAATCATGAATGCTCCACAATTTCAACATACCACAAGAGAAGTTAATTTCTT 3931
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 3932 AACATTGTGTTCTATGATTATTTGTAAGACCTTCACCAAGTTCTGATATCTTTTAAAGACATAGTTCAAAATTG 4005
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4006 CTTTTGAAAATCTGTATTCTTGAAAATATCCTTGTTGTGTATTAGGTTTTTAAATACCAGCTAAAGGATTACCT 4079
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4080 CACTGAGTCATCAGTACCCTCCTATTCAGCTCCCCAAGATGATGTGTTTTTGCTTACCCTAAGAGAGGTTTTCT 4153
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4154 TCTTATTTTTAGATAATTCAAGTGCTTAGATAAATTATGTTTTCTTTAAGTGTTTATGGTAAACTCTTTTAAAG 4227
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4228 AAAATTTAATATGTTATAGCTGAATCTTTTTGGTAACTTTAAATCTTTATCATAGACTCTGTACATATGTTCAA 4301
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4302 ATTAGCTGCTTGCCTGATGTGTGTATCATCGGTGGGATGACAGAACAAACATATTTATGATCATGAATAATGTG 4375
Query 2619 -------------------------------------------------------------------------- 2618
Sbjct 4376 CTTTGTAAAAAGATTTCAAGTTATTAGGAAGCATACTCTGTTTTTTAATCATGTATAATATTCCATGATACTTT 4449
Query 2619 --------------------------------------------------------------------- 2618
Sbjct 4450 TATAGAACAATTCTGGCTTCAGGAAAGTCTAGAAGCAATATTTCTTCAAATAAAAGGTGTTTAAACTTT 4518
