Nucleotide Global Alignment

Description

Query:
TRCN0000489919
Subject:
NR_073509.1
Aligned Length:
2575
Identities:
1115
Gaps:
1429

Alignment

Query    1  ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATA-CTGGGAAAATATTTGCCATGAAG  369
                                                       .|||.|| |||||     |||          
Sbjct    1  -------------------------------------------ACAAGTAGCTGGG-----ATT----------  16

Query  370  GTGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGA  443
                    |.||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct   17  --------ACAGGCAATGATAGTAGGAAATGCTAAAGATACAGCTCATACAAAAGCAGAATGGAATATTCTGGA  82

Query  444  GGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG  517
            .||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct   83  AGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCTTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG  156

Query  518  AGTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCT-----  586
            |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||.|     
Sbjct  157  AGTATCTCAGT---GGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCGTGGCCT  227

Query  587  --------------------------------------------------------------------------  586
                                                                                      
Sbjct  228  TTTCTAACACGGAAGCTGCATTTAAGAGCCTTAGGGATGAAGTGCCCTTTTGTGGAGGAGGCTCACTGAGCAGT  301

Query  587  --------------------------------------------------------------------------  586
                                                                                      
Sbjct  302  GTTGGAGGCTGTGTTTGTGGTCGTGCTGGCTGTGAAACTGCCTCAGTCCTTCCTCTAGGACACACCCTCTCCAT  375

Query  587  --------------------------------------------------------------------------  586
                                                                                      
Sbjct  376  CCTGGAATAATCTGCAGGATTGCAACATTGTTAAGCAGCCAGTATTGCGGTGCCTTGTGCTTTTCACATCCAGA  449

Query  587  ------------------------------GCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT  630
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  450  CAGGGTTGATTCAGCCCTTTATTCTTTTGAGCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT  523

Query  631  CAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC  704
            ||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  524  CAAAAGGGGATCATCTACAGAGACTTGAAGCTGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC  597

Query  705  AGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA  778
            |||||||||||||||||||||||| ||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  598  AGACTTTGGACTATGCAAAGAATC-ATTCATGACGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA  670

Query  779  TGGCCCCTGAAATCTTGATGAGAAGTGGCCACA-ATCGTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTA  851
            ||     ||  |.||..|||..||      ||| |           |||||      ||.||||          
Sbjct  671  TG-----TG--AGCTGCATGTTAA------ACATA-----------ATTGG------TTTGGAG----------  704

Query  852  TGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTA  925
                               ||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  705  -------------------CCTCCATTTACTGGGGAGAATAGAAAGAAAACAATTGACAACATCCTCAAATGTA  759

Query  926  AACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCT  999
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  760  AACT-AATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTACTGAAAAGAAATGCTGCT  832

Query 1000  TCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA  1073
            ||||.|||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  833  TCTCATCTGGGAGCTGGTCCTGGGGATGCTGGAGATGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA  906

Query 1074  AGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG  1147
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  907  AGAACTTCTGGCTCGAAAGGTGGAGCCCCCATTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG  980

Query 1148  ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTC  1221
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  981  ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCCATCAGGTC  1054

Query 1222  TTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT  1295
            ||||||||||||||.|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1055  TTTCTGGGTTTTACTTATGTGGCTCCATCTGTACTTG-AAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT  1127

Query 1296  CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCCAGTCAAATTTTCTCCTGGGGATTTCT  1369
            ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||
Sbjct 1128  CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCC-----AATTTTCTCCTGGGGATTTCT  1196

Query 1370  GGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCATA  1443
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1197  GGGGAAGAGGCGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCACA  1270

Query 1444  GAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATA  1517
            |||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1271  GAGCAGATGGATGTGACAACGAGTGGGGAAGCATTGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATA  1344

Query 1518  CAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTAT----------TG---  1578
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||   
Sbjct 1345  CAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTATGCCACAGCAATGCTT  1418

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1419  TTAATGAATTTAAGGCAAAAAAGGTGGAGAGGCCGATGTGTGAGCATCCTACAGGGTGAAACAAGACTCAAAGT  1492

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1493  GACAATTTCAGAGAGTCAGTGTCATTACATAGAACACTTTGGACAGAGGAAAAATAAACATGGATTTTAAAAAA  1566

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1567  ATCAATCAATCGTGCAAAAAAACTTAAAGCAAAATAGTACTGCTGAACACTCAGGCACATCAATTAATTGTTTC  1640

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1641  CTCGTGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATGACTCGAAACTGACAGTATTAAGGGTAGGAT  1714

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1715  GTTGCTTCTGAATCACTGTTGAGTTCTAACTGTGTCGAAGAAGGGTTATCCTTTCATTAGGCAAAGTACAAAAT  1788

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1789  TGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTTGGTCAAACTTTTTCCAGCAACATGGAATCA  1862

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1863  AAGACAAAAGAAACTTACCAATTGATGTTTTACGTGAACATAACCTGAATCTTTTTTTATATAAATATATATTT  1936

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 1937  TTCAAGTAGATTTTTGATTCAGCTCATTATGAAAAACATCCCAAACTTTAAAATGCGAAATTATTAGTTGGTGT  2010

Query 1579  --------------------------------------------------------------------------  1578
                                                                                      
Sbjct 2011  GAAGAAAGCCAAACAACTTCCGTTTCTTCTCTTGGTGAAATAATAAAATGCAAATGAATCATTGTTAACCACAT  2084

Query 1579  -----------------------------------------------------------  1578
                                                                       
Sbjct 2085  CTGTGGCTCGTTCGAGGGACTGGGGTGGACCTGGGGTTTATTTTCAGTAACCCAGCTGC  2143

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