Nucleotide Global Alignment
Description
- Query:
- TRCN0000489919
- Subject:
- NR_073509.1
- Aligned Length:
- 2575
- Identities:
- 1115
- Gaps:
- 1429
Alignment
Query 1 ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATA-CTGGGAAAATATTTGCCATGAAG 369
.|||.|| ||||| |||
Sbjct 1 -------------------------------------------ACAAGTAGCTGGG-----ATT---------- 16
Query 370 GTGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGA 443
|.||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 17 --------ACAGGCAATGATAGTAGGAAATGCTAAAGATACAGCTCATACAAAAGCAGAATGGAATATTCTGGA 82
Query 444 GGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG 517
.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 83 AGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCTTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG 156
Query 518 AGTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCT----- 586
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 157 AGTATCTCAGT---GGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCGTGGCCT 227
Query 587 -------------------------------------------------------------------------- 586
Sbjct 228 TTTCTAACACGGAAGCTGCATTTAAGAGCCTTAGGGATGAAGTGCCCTTTTGTGGAGGAGGCTCACTGAGCAGT 301
Query 587 -------------------------------------------------------------------------- 586
Sbjct 302 GTTGGAGGCTGTGTTTGTGGTCGTGCTGGCTGTGAAACTGCCTCAGTCCTTCCTCTAGGACACACCCTCTCCAT 375
Query 587 -------------------------------------------------------------------------- 586
Sbjct 376 CCTGGAATAATCTGCAGGATTGCAACATTGTTAAGCAGCCAGTATTGCGGTGCCTTGTGCTTTTCACATCCAGA 449
Query 587 ------------------------------GCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT 630
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 CAGGGTTGATTCAGCCCTTTATTCTTTTGAGCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT 523
Query 631 CAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC 704
||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 CAAAAGGGGATCATCTACAGAGACTTGAAGCTGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC 597
Query 705 AGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA 778
|||||||||||||||||||||||| ||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 598 AGACTTTGGACTATGCAAAGAATC-ATTCATGACGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA 670
Query 779 TGGCCCCTGAAATCTTGATGAGAAGTGGCCACA-ATCGTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTA 851
|| || |.||..|||..|| ||| | ||||| ||.||||
Sbjct 671 TG-----TG--AGCTGCATGTTAA------ACATA-----------ATTGG------TTTGGAG---------- 704
Query 852 TGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTA 925
||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 705 -------------------CCTCCATTTACTGGGGAGAATAGAAAGAAAACAATTGACAACATCCTCAAATGTA 759
Query 926 AACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCT 999
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 760 AACT-AATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTACTGAAAAGAAATGCTGCT 832
Query 1000 TCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA 1073
||||.|||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 833 TCTCATCTGGGAGCTGGTCCTGGGGATGCTGGAGATGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA 906
Query 1074 AGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG 1147
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AGAACTTCTGGCTCGAAAGGTGGAGCCCCCATTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG 980
Query 1148 ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTC 1221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 981 ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCCATCAGGTC 1054
Query 1222 TTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT 1295
||||||||||||||.|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1055 TTTCTGGGTTTTACTTATGTGGCTCCATCTGTACTTG-AAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT 1127
Query 1296 CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCCAGTCAAATTTTCTCCTGGGGATTTCT 1369
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1128 CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCC-----AATTTTCTCCTGGGGATTTCT 1196
Query 1370 GGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCATA 1443
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1197 GGGGAAGAGGCGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCACA 1270
Query 1444 GAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATA 1517
|||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1271 GAGCAGATGGATGTGACAACGAGTGGGGAAGCATTGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATA 1344
Query 1518 CAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTAT----------TG--- 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1345 CAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTATGCCACAGCAATGCTT 1418
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1419 TTAATGAATTTAAGGCAAAAAAGGTGGAGAGGCCGATGTGTGAGCATCCTACAGGGTGAAACAAGACTCAAAGT 1492
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1493 GACAATTTCAGAGAGTCAGTGTCATTACATAGAACACTTTGGACAGAGGAAAAATAAACATGGATTTTAAAAAA 1566
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1567 ATCAATCAATCGTGCAAAAAAACTTAAAGCAAAATAGTACTGCTGAACACTCAGGCACATCAATTAATTGTTTC 1640
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1641 CTCGTGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATGACTCGAAACTGACAGTATTAAGGGTAGGAT 1714
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1715 GTTGCTTCTGAATCACTGTTGAGTTCTAACTGTGTCGAAGAAGGGTTATCCTTTCATTAGGCAAAGTACAAAAT 1788
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1789 TGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTTGGTCAAACTTTTTCCAGCAACATGGAATCA 1862
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1863 AAGACAAAAGAAACTTACCAATTGATGTTTTACGTGAACATAACCTGAATCTTTTTTTATATAAATATATATTT 1936
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1937 TTCAAGTAGATTTTTGATTCAGCTCATTATGAAAAACATCCCAAACTTTAAAATGCGAAATTATTAGTTGGTGT 2010
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2011 GAAGAAAGCCAAACAACTTCCGTTTCTTCTCTTGGTGAAATAATAAAATGCAAATGAATCATTGTTAACCACAT 2084
Query 1579 ----------------------------------------------------------- 1578
Sbjct 2085 CTGTGGCTCGTTCGAGGGACTGGGGTGGACCTGGGGTTTATTTTCAGTAACCCAGCTGC 2143
