Nucleotide Global Alignment
Description
- Query:
- TRCN0000489919
- Subject:
- NR_161461.1
- Aligned Length:
- 5432
- Identities:
- 1578
- Gaps:
- 3854
Alignment
Query 1 ----------------------------------------------------------------ATGAGGCGAC 10
||||||||||
Sbjct 1 GCACTGAGCCTAAGCAGCCGGTGATGGCGGCAGCGGCTGTGGTGGCTGCGGCGGGTCCGGGCCCATGAGGCGAC 74
Query 11 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTT 148
Query 85 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGTTAAATGAAAG 222
Query 159 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATCTCAGAAACTA 296
Query 233 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAAAGGGGGCTAT 370
Query 307 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGGTGCTTAAAAA 444
Query 381 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAGGAAGTAAAGC 518
Query 455 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGAGTATCTCAGT 592
Query 529 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTTACTTGGCAGA 666
Query 603 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGC 740
Query 677 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACA 814
Query 751 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAATCGTGCTGTGGA 888
Query 825 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCA----CCCCCATTCACTGGGGAGAATAGA 894
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 889 TTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCAGTAGCCCCCATTCACTGGGGAGAATAGA 962
Query 895 AAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCT 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCT 1036
Query 969 GCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAG 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAG 1110
Query 1043 CTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTG 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTG 1184
Query 1117 TTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGA 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGA 1258
Query 1191 CTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTG 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTG 1332
Query 1265 TGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTC 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTC 1406
Query 1339 AGCCCAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACC 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCCCAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGCCAGCACAGCAAATCCTCAGACACC 1480
Query 1413 TGTGGAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCAC 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGTGGAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAATGAGTGGGGAAGCATCGGCACCAC 1554
Query 1487 TTCCAATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCAC 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTCCAATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCAC 1628
Query 1561 CTGCGTATGAATCTAT----------TG---------------------------------------------- 1578
|||||||||||||||| ||
Sbjct 1629 CTGCGTATGAATCTATGACAGAGCAATGCTTTTAATGAATTTAAGGCAAAAAAGGTGGAGAGGGAGATGTGTGA 1702
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1703 GCATCCTGCAAGGTGAAACGACTCAAAATGACAGTTTCAGAGAGTCAATGTCATTACATAGAACACTTCAGACA 1776
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1777 CAGGAAAAATAAACGTGGATTTTAAAAAATCAATCAATGGTGCAAAAAAAAACTTAAAGCAAAATAGTATTGCT 1850
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1851 GAACTCTTAGGCACATCAATTAATTGATTCCTCGCGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATG 1924
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1925 ACTCGAAACTGACAGTATTAAGGGTAGGATGTTGCTTCTGAATCACTGTTGAGTTCTGATTGTGTTGAAGAAGG 1998
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 1999 GTTATCCTTTCATTAGGCAAAGTACAAAATTGCCTATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTT 2072
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2073 GGTCAAACTTTTTCCAGCAAAATGGAAGCAAAGACAAAAGAAACTTACCAATTGATGTTTTACGTGCAAACAAC 2146
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2147 CTGAATCTTTTTTTTATATAAATATATATTTTTCAAATAGATTTTTGATTCAGCTCATTATGAAAAACATCCCA 2220
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2221 AACTTTAAAATGCGAAATTATTGGTTGGTGTGAAGAAAGCCAGACAACTTCTGTTTCTTCTCTTGGTGAAATAA 2294
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2295 TAAAATGCAAATGAATCATTGTTAACCACAGCTGTGGCTCGTTTGAGGGATTGGGGTGGACCTGGGGTTTATTT 2368
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2369 TCAGTAACCCAGCTGCAATACCTGTCTGTAATATGAGAAAAAAAAAATGAATCTATTTAATCATTTCTACTTGC 2442
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2443 AGTACTGCTATGTGCTAAGCTTAACTGGAAGCCTTGGAATGGGCATAAGTTGTATGTCCTACATTTCATCATTG 2516
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2517 TCCCGGGCCTGCATTGCACTGGAAAAAAAAATCGCCACCTGTTCTTACACCAGTATTTGGTTCAAGACACCAAA 2590
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2591 TGTCTTCAGCCCATGGCTGAAGAACAACAGAAGAGAGTCAGGATAAAAAATACATACTGTGGTCGGCAAGGTGA 2664
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2665 GGGAGATAGGGATATCCAGGGGAAGAGGGTGTTGCTGTGGCCCACTCTCTGTCTAATCTCTTTACAGCAAATTG 2738
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2739 GTAAGATTTTCAGTTTTACTTCTTTCTACTGTTTCTGCTGTCTACCTTCCTTATATTTTTTTCCTCAACAGTTT 2812
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2813 TAAAAAGAAAAAAAGGTCTATTTTTTTTTCTCCTATACTTGGGCTACATTTTTTGATTGTAAAAATATTTGATG 2886
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2887 GCCTTTTGATGAATGTCTTCCACAGTAAAGAAAACTTAGTGGCTTAATTTAGGAAACATGTTAACAGGACACTA 2960
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 2961 TGTTTTTGAAATTGTAACAAAATCTACATAAATGATTTACAGGTTAAAAGAATAAAAATAAAGGTAACTTTACC 3034
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3035 TTTCTTAAATATTTCCTGCCTTAAAGAGAGCATTTCCATGACTTTAGCTGGTGAAAGGGTTTAATATCTGCAGA 3108
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3109 GCTTTATAAAAATATATTTCAGTGCATACTGGTATAATAGATGATCATGCAGTTGCAGTTGAGTTGTATCACCT 3182
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3183 TTTTTGTTTGTCTTTTATAATGTCTTCAGTCTGAGTGTGCAAAGTCAATTTGTAATATTTTGCAACCCTAGGAT 3256
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3257 TTTTTTAAATAGATGCTGCTTGCTATGTTTTCAAACCTTTTTGAGCCATAGGATCCAAGCCATAAAATTCTTTA 3330
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3331 TGCATGTTGAATTCAGTCAGAAAAGAGCAAGGCTTTGCTTTTTGAAATTGCAACTCAAATGAGATGGGATGAAA 3404
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3405 TCCTATGACAGTAAGCAAAAACAGAACCATGAAAAATGATTGGACATACACCTTTTCAATTGTGGCAATAATTG 3478
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3479 AAAGAATCGATAAAAGTTCATCTTTGGACAGAAAGCCTTTAAAAAAAAAATCACTCCCTCTTCCCCCTCCTCCC 3552
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3553 TTATTGCAGCAGCCTACTGAGAACTTTGACTGTTGCTGGTAAATTAGAAGCTACAATAATAATTAAGGGCAGAA 3626
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3627 ATTATACTTAAAAAGTGCAGATCCTTGTTCTTTGACAATTTGTGATGTCTGAAAAAACAGAACCCGAAAAGCTA 3700
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3701 TGGTGATATGTACAGGCATTATTTCAGACTGTAAATGGCTTGTGATACTCTTGATACTTGTTTTCAAATATGTT 3774
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3775 TACTAACTGTAGTGTTGACTGCCTGACCAAATTCCAGTGAAACTTATACACCAAAATATTCTTCCTAGGTCCTA 3848
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3849 TTTGCTAGTAACATGAGCACTGTGATTGGCTGGCTATAACCACCCCAGTTAAACCATTTTCATAATTAGTAGTG 3922
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3923 CCAGCAATAGTGGCAAACACTGCAACTTTTCTGCATAAAAAGCATTAATTGCACAGCTACCATCCACACAAATA 3996
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 3997 CATAGTTTTTCTGACTTCACATTTATTAAGTGAAATTTATTTCCCATGCTGTGGAAAGTTTATTGAGAACTTGT 4070
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4071 TTCATAAATGGATATCCCTACTATGACTGTGAAAACATGTCAAGTGTCACATTAGTGTCACAGACAGAAAGCAC 4144
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4145 ACACCTATGCAATATGGCTTATCTATATTTATTTGTAAAAATCCAAGCATAGTTTAAAATATGATGTCGATATT 4218
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4219 ACTAGTCTTGAGTTTCTAAGAGGGTTCTTTATGTTATACCAGGTAAGTGTATAAAAGAGATTAAGTGCTTTTTT 4292
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4293 TTCATCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATACATGCTGTTTTTTAA 4366
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4367 TTAAAATATAATCACTGAAGTTTACTAATTTGATTTTATAAGGTTTGTAGCATTACAGAATAACTAAACTGGGA 4440
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4441 TTTATAAACCAGCTGTGATTAACAATGTAAAGTATTAATTATTGAACTTTGAACCAGATTTTTAGGAAAATTAT 4514
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4515 GTTCTTTTTCCCCCTTTATGGTCTTAACTAATTTGAATCCTTCAAGAAGGATTTTTCCATACTATTTTTTAAGA 4588
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4589 TAGAAGATAATTTGTGGGCAGGGGTGGAGGATGCATGTATGATACTCCATAAATTCAACATTCTTTACTATAGG 4662
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4663 TAATGAATGATTATAAACAAGATGCATCTTAGATAGTATTAATATACTGAGCCTTGGATTATATATTTAATATA 4736
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4737 GGACCTATTTTGAATATTCAGTTAATCATATGGTTCCTAGCTTACAAGGGCTAGATCTAAGATTATTCCCATGA 4810
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4811 GAAATGTTGAATTTATGAAGAATAGATTTTAAGGCTTTGAAAATGGTTAATTTCTCAAAAACATCAATGTCCAA 4884
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4885 ACATCTACCTTTTTTCATAGGAGTAGACACTAGCAAGCTGGACAAACTATCACAAAAGTATTTGTCACACATAA 4958
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 4959 CCTGTGGTCTGTTGCTGATTAATACAGTACTTTTTCTTGTGTGATTCTTAACATTATAGCACAAGTATTATCTC 5032
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 5033 AGTGGATTATCCGGAATAACATCTGAAAGATGGGTTCATCTATGTTTGTGTTTGCTCTTTAAACTATTGTTTCT 5106
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 5107 CCTATCCCAAGTTCGCTTTGCATCTATCAGTAAATAAAATTCTTCAGCTGCCTTATTAGGAGTGCTATGAGGGT 5180
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 5181 AACACCTGTTCTGCTTTTCATCTTGTATTTAGTTGACTGTATTATTTGATTTCGGATTGAATGAATGTAAATAG 5254
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 5255 AAATTAAATGCAAATTTGAATGAACATAAATAGAAGTGATTTATTTTTTTATTATCTTAAAGATAGGAAGGAAT 5328
Query 1579 -------------------------------------------------------------------------- 1578
Sbjct 5329 TAGTATACGTATCAGGTGTATAAATGGTTTAAATTTATTTTAACATGTCAGATGTGTTCAAGTTGTCATATAAA 5402
Query 1579 ------------------------------ 1578
Sbjct 5403 TAAACTATGTATGTAAGGAATGGGTTAAAA 5432
