Nucleotide Global Alignment

Description

Query:
TRCN0000489919
Subject:
XM_017314793.1
Aligned Length:
1596
Identities:
583
Gaps:
972

Alignment

Query    1  ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC  74
            ||||||||||||.|||||||||||||||||||||.|||.||.|||||||||.||||||||||||||||||||||
Sbjct    1  ATGAGGCGACGACGGAGGCGGGACGGCTTTTACCTAGCGCCTGACTTCCGACACAGGGAAGCTGAGGACATGGC  74

Query   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148
            |||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||||
Sbjct   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAAGATGCAGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148

Query  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222

Query  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296

Query  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAGATATTTGCCATGAAGG  370

Query  371  TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG  444
            ||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||.|||||||||
Sbjct  371  TGCTTAAAAAGGCAATGATAGTGAGGAATGCTAAGGACACGGCCCACACGAAAGCAGAGCGGAACATTCTGGAG  444

Query  445  GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA  518
            |||||.||.||.||.|||||.|||||..|.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct  445  GAAGTGAAACACCCTTTCATTGTGGACCTGATTTATGCCTTTCAGACCGGAGGAAAGCTCTACCTCATCCTCGA  518

Query  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTG--CT-  589
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.||  || 
Sbjct  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTCATGGAAGACACAGCGTGGCCTT  592

Query  590  -------------TTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT--CAAAAGGGGATCATCTAC  648
                         ||.|||  |||| |||.|||.||..||    ||.|||||.|  |                 
Sbjct  593  GGGTGGACCGCTCTTCACT--GCAG-AATTTCCTTGAATT----GCTTTTACTTGGC-----------------  642

Query  649  AGAGACCTGAAGCCGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAA  722
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query  723  AGAATCTATTCATGATGGAACAGTCACACACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGA  796
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query  797  TGAGAAGTGGCCACAATCGTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCA  870
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query  871  CCCCCATTCACTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTA  944
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query  945  CCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTC  1018
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1019  CTGGGGACGCTGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAG  1092
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1093  GTGGAGCCCCCCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCA  1166
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1167  GACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATG  1240
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1241  TGGCTCCATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTT  1314
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1315  ATTGGCAGCCCACGAACACCTGTCAGCCCAGTCAAATTTTCTCCTGGGGATTTCTGGGGAAGAGGTGCTTCGGC  1388
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1389  CAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCATAGAGCAGATGGATGTGACAA  1462
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1463  TGAGTGGGGAAGCATCGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATACAAAAAACAAGCTTTTCCC  1536
                                                                                      
Sbjct  643  --------------------------------------------------------------------------  642

Query 1537  ATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTATTG  1578
                                                      
Sbjct  643  ------------------------------------------  642