Nucleotide Global Alignment

Description

Query:
TRCN0000489952
Subject:
NM_001321045.2
Aligned Length:
2798
Identities:
478
Gaps:
2302

Alignment

Query    1  ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT  74

Query   75  AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG  148

Query  149  ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC  222

Query  223  ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC  296

Query  297  AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG  370

Query  371  ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAG--------------------------  418
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct  371  ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTA  444

Query  419  ---------------GTAAGAAAGTAGCTT------------------TGTA----------TACAAACAT---  446
                           |||||||||.||.||                  ||||          .|.|||.||   
Sbjct  445  TTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATGAAATAAAAAAGATCCA  518

Query  447  --------TCTTTACCTTT------------TCTGTCTTA---ATTGTTGGTTTAAAAAAAAAAA---AGTTAC  494
                    ||.|.|.||||            .|||.||||   |||||  .|||..|.|.||.||   |||||.
Sbjct  519  AGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAAGGATTGT--CTTTGTACATAACAAGGCAGTTAT  590

Query  495  TCGG----------------------------------------------------------------------  498
            |.||                                                                      
Sbjct  591  TTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGTTCTGGGGACTGCTGTTATGAACAATA  664

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct  665  TGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCTCAGTGGATTTCTTCCAAAGTGTGATGCAGAC  738

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct  739  CACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCTTCATAAACAGTCGACCAGTACATCAAAAAGA  812

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct  813  TATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTAAAGGAATCTACTCGTTTGTATCCTGTTTTCT  886

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct  887  TTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTTAACACCAGATAAAAGCCAAGTATTATTACAA  960

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct  961  AATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGACTTGTTATGGACCATTACCTAGTACAAATTC  1034

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1035  TTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTTCTTAGTAAAACAGCAGAAACAGATGTGCTTT  1108

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1109  TTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGATACTTCAGTCATTCCATTCCAAAATGATATG  1182

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1183  CATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATCACCAGATAAGTATTGGTGACTTTGGTTATGG  1256

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1257  TCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGAATGCATTTCAGGACATTTCAATGAGTAATG  1330

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1331  TATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTTTATAAGTTCCGTTAAGCACACCCAGTCAGAA  1404

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1405  AATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGGAAGAAGCAGGTCTTGAAAACTCTTCGGAAAT  1478

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1479  TTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCAGTGGGAGAGAATATTGAACCTGTGAAAATTT  1552

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1553  TAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAATTATCCAATCCCTGAACAAATGAATCTTAAT  1626

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1627  GAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAATCTGGAAAAGTTACAGCTTATGATTTACTTAG  1700

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1701  CAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTTGTTCAAGATCATCGTCCTCAGTTTCTCATAG  1774

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1775  AAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGAAGAACTGTGGAAGACATTGAGTGAAGAGGAA  1848

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1849  AAACTGAAATATGAAGAGAAGGCTACTAAAGACTTGGAACGATACAATAGTCAAATGAAGAGAGCCATTGAACA  1922

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1923  GGAGTCACAAATGTCACTAAAAGATGGCAGAAAAAAGATAAAACCCACCAGCGCATGGAATTTGGCCCAGAAGC  1996

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 1997  ACAAGTTAAAAACCTCATTATCTAATCAACCAAAACTTGATGAACTCCTTCAGTCCCAAATTGAAAAAAGAAGG  2070

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2071  AGTCAAAATATTAAAATGGTACAGATCCCCTTTTCTATGAAAAACTTAAAAATAAATTTTAAGAAACAAAACAA  2144

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2145  AGTTGACTTAGAAGAGAAGGATGAACCTTGCTTGATCCACAATCTCAGGTTTCCTGATGCATGGCTAATGACAT  2218

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2219  CCAAAACAGAGGTAATGTTATTAAATCCATATAGAGTAGAAGAAGCCCTGCTATTTAAAAGACTTCTTGAGAAT  2292

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2293  CATAAACTTCCTGCAGAGCCACTGGAAAAGCCAATTATGTTAACAGAGAGTCTTTTTAATGGATCTCATTATTT  2366

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2367  AGACGTTTTATATAAAATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCGTCTTA  2440

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2441  CAGCGAATGGTTTCAAGATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAAATAGAAGGAATG  2514

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2515  GCTAATTGTCTCCCATTCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAACAGAAATGCAAA  2588

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2589  GGAAGTTTATGAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTATCCAGACAAT  2662

Query  499  --------------------------------------------------------------------------  498
                                                                                      
Sbjct 2663  TACCCATGTACTTATCAAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTTGGAAATGAAATT  2736

Query  499  ------------------------------------------------------------  498
                                                                        
Sbjct 2737  AAAGAGTGTGTTCATGGTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACA  2796

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