Nucleotide Global Alignment
Description
- Query:
- TRCN0000489952
- Subject:
- XR_002959307.1
- Aligned Length:
- 3228
- Identities:
- 478
- Gaps:
- 2732
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGCGGGTGCGGGGTTGGGCCTGCGCATCGGGTGAGACGCTGGCTGCTTGCGGCTAGTGGATGGTAATTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTCGCGCTAGCAGGAAGGTAGTGTGGTGTGACTAACGGGCACACCTGTTGTCCTTAACTGACTTTCCGGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCAGCACTTCTTCAGAAGTGTTCCTTTTCCCTCCCAGCAAATATGGAAGACTGACTATCCTGATATTCCCAGA 222
Query 1 --------------------------------------ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTT 36
||||||||||||||||||||||||||||||||||||
Sbjct 223 CATTCTTTGCTGTGATTTCTGCTCTGTTAAAAGCGAAAATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTT 296
Query 37 TCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGC 370
Query 111 CACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCA 444
Query 185 AGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAAT 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAAT 518
Query 259 TTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAG 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAG 592
Query 333 AACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCAC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCAC 666
Query 407 ATCTTGGTCAAG-----------------------------------------GTAAGAAAGTAGCTT------ 433
|||||||||||| |||||||||.||.||
Sbjct 667 ATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTATTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCA 740
Query 434 ------------TGTA----------TACAAACAT-----------TCTTTACCTTT------------TCTGT 462
|||| .|.|||.|| ||.|.|.|||| .|||.
Sbjct 741 ACTGCAAAAAAATGTAAAGATGAAATAAAAAAGATCCAAGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGA 814
Query 463 CTTA---ATTGTTGGTTTAAAAAAAAAAA---AGTTACTCGG-------------------------------- 498
|||| ||||| .|||..|.|.||.|| |||||.|.||
Sbjct 815 CTTAAGGATTGT--CTTTGTACATAACAAGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGC 886
Query 499 -------------------------------------------------------------------------- 498
Sbjct 887 TCTCATGTCAGTTCTGGGGACTGCTGTTATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGA 960
Query 499 -------------------------------------------------------------------------- 498
Sbjct 961 TTTATCTCAGTGGATTTCTTCCAAAGTGTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGT 1034
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1035 TTCATCTTCATAAACAGTCGACCAGTACATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAA 1108
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1109 ATGCCTAAAGGAATCTACTCGTTTGTATCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATG 1182
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1183 TAAATTTAACACCAGATAAAAGCCAAGTATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTG 1256
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1257 ATGACGACTTGTTATGGACCATTACCTAGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGA 1330
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1331 CATCGTTCTTAGTAAAACAGCAGAAACAGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAA 1404
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1405 ATGTTGATACTTCAGTCATTCCATTCCAAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGT 1478
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1479 TTAAATCACCAGATAAGTATTGGTGACTTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAA 1552
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1553 CACTAAGAATGCATTTCAGGACATTTCAATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAA 1626
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1627 CTTGTTTTATAAGTTCCGTTAAGCACACCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAA 1700
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1701 AATGAGGAAGAAGCAGGTCTTGAAAACTCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAA 1774
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1775 AAATTCAGTGGGAGAGAATATTGAACCTGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTA 1848
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1849 ATAATAATTATCCAATCCCTGAACAAATGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGAT 1922
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1923 AATAAATCTGGAAAAGTTACAGCTTATGATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGC 1996
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1997 TCTTTTTGTTCAAGATCATCGTCCTCAGTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTAC 2070
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2071 AAATTGAAGAACTGTGGAAGACATTGAGTGAAGAGGAAAAACTGAAATATGAAGAGAAGGCTACTAAAGACTTG 2144
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2145 GAACGATACAATAGTCAAATGAAGAGAGCCATTGAACAGGAGTCACAAATGTCACTAAAAGATGGCAGAAAAAA 2218
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2219 GATAAAACCCACCAGCGCATGGAATTTGGCCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCAAAAC 2292
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2293 TTGATGAACTCCTTCAGTCCCAAATTGAAAAAAGAAGGAGTCAAAATATTAAAATGGTACAGATCCCCTTTTCT 2366
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2367 ATGAAAAACTTAAAAATAAATTTTAAGAAACAAAACAAAGTTGACTTAGAAGAGAAGGATGAACCTTGCTTGAT 2440
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2441 CCACAATCTCAGGTTTCCTGATGCATGGCTAATGACATCCAAAACAGAGGTAATGTTATTAAATCCATATAGAG 2514
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2515 TAGAAGAAGCCCTGCTATTTAAAAGACTTCTTGAGAATCATAAACTTCCTGCAGAGCCACTGGAAAAGCCAATT 2588
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2589 ATGTTAACAGAGAGACGTTTTATATAAAATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTG 2662
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2663 ATCCTCGTCTTACAGCGAATGGTTTCAAGATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAA 2736
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2737 ATAGAAGGAATGGCTAATTGTCTCCCATTCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAA 2810
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2811 CAGAAATGCAAAGGAAGTTTATGAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTC 2884
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2885 TATCCAGACAATTACCCATGTACTTATCAAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTT 2958
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2959 GGAAATGAAATTAAAGAGTGTGTTCATGGTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACATG 3032
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3033 ATTAAATATGTTTAAGAAGATTAGTTACCATTGAAATTGGTTCTGTCATAAAACAGCATGAGTCTGGTTTTAAA 3106
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3107 TTATCTTTGTATTATGTGTCACATGGTTATTTTTTAAATGAGGATTCACTGACTTGTTTTTATATTGAAAAAAG 3180
Query 499 ---------------------------------------------- 498
Sbjct 3181 TTCCACGTATTGTAGAAAACGTAAATAAACTAATATAGACTATTCA 3226
