Nucleotide Global Alignment
Description
- Query:
- TRCN0000489952
- Subject:
- XR_922951.2
- Aligned Length:
- 3126
- Identities:
- 478
- Gaps:
- 2630
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCTCTCTGCACCCGCTCTGCCGCGCGCGTGCGTGCTGGGTGCGGGTGCGGGTGCGGGGTTGGGCCTGCGCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGTGAGACGCTGGCTGCTTGCGGCTAGTGGATGGTAATTGCCTGCCTCGCGCTAGCAGGAAGCTGCTCTGTT 148
Query 1 ----------ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAAAGCGAAAATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGG 222
Query 65 TCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAAC 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAGTGTTGTAAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAAC 296
Query 139 TATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAAT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATGGATTTGATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAAT 370
Query 213 GAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAG 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAAGTACTACACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAG 444
Query 287 CCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTTGGGGTCAATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAG 518
Query 361 TATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAG---------------- 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATGTTTTAGATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGC 592
Query 419 -------------------------GTAAGAAAGTAGCTT------------------TGTA----------TA 439
|||||||||.||.|| |||| .|
Sbjct 593 TTTAAGATTATTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATGAAATAA 666
Query 440 CAAACAT-----------TCTTTACCTTT------------TCTGTCTTA---ATTGTTGGTTTAAAAAAAAAA 487
.|||.|| ||.|.|.|||| .|||.|||| ||||| .|||..|.|.||.|
Sbjct 667 AAAAGATCCAAGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAAGGATTGT--CTTTGTACATAACA 738
Query 488 A---AGTTACTCGG------------------------------------------------------------ 498
| |||||.|.||
Sbjct 739 AGGCAGTTATTTGGCAGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGTTCTGGGGACTGCTGTT 812
Query 499 -------------------------------------------------------------------------- 498
Sbjct 813 ATGAACAATATGGAATCCTTTCAGTACCACTCTGAAGAATCTCAGATTTATCTCAGTGGATTTCTTCCAAAGTG 886
Query 499 -------------------------------------------------------------------------- 498
Sbjct 887 TGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATCTTCATAAACAGTCGACCAGTAC 960
Query 499 -------------------------------------------------------------------------- 498
Sbjct 961 ATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCTAAAGGAATCTACTCGTTTGTAT 1034
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1035 CCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATTTAACACCAGATAAAAGCCAAGT 1108
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1109 ATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACGACTTGTTATGGACCATTACCTA 1182
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1183 GTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGTTCTTAGTAAAACAGCAGAAACA 1256
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1257 GATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTGATACTTCAGTCATTCCATTCCA 1330
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1331 AAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAATCACCAGATAAGTATTGGTGACT 1404
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1405 TTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAAGAATGCATTTCAGGACATTTCA 1478
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1479 ATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTTTTATAAGTTCCGTTAAGCACAC 1552
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1553 CCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAGGAAGAAGCAGGTCTTGAAAACT 1626
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1627 CTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTCAGTGGGAGAGAATATTGAACCT 1700
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1701 GTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATAATTATCCAATCCCTGAACAAAT 1774
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1775 GAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAATCTGGAAAAGTTACAGCTTATG 1848
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1849 ATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTTTGTTCAAGATCATCGTCCTCAG 1922
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1923 TTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTGAAGAACTGTGGAAGACATTGAG 1996
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1997 TGAAGAGGAAAAACTGAAATATGAAGAGAAGGCTACTAAAGACTTGGAACGATACAATAGTCAAATGAAGAGAG 2070
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2071 CCATTGAACAGGAGTCACAAATGTCACTAAAAGATGGCAGAAAAAAGATAAAACCCACCAGCGCATGGAATTTG 2144
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2145 GCCCAGAAGCACAAGTTAAAAACCTCATTATCTAATCAACCAAAACTTGATGAACTCCTTCAGTCCCAAATTGA 2218
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2219 AAAAAGAAGGAGTCAAAATATTAAAATGGTACAGATCCCCTTTTCTATGAAAAACTTAAAAATAAATTTTAAGA 2292
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2293 AACAAAACAAAGTTGACTTAGAAGAGAAGGATGAACCTTGCTTGATCCACAATCTCAGGTTTCCTGATGCATGG 2366
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2367 CTAATGACATCCAAAACAGAGGTAATGTTATTAAATCCATATAGAGTAGAAGAAGCCCTGCTATTTAAAAGACT 2440
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2441 TCTTGAGAATCATAAACTTCCTGCAGAGCCACTGGAAAAGCCAATTATGTTAACAGAGAGACGTTTTATATAAA 2514
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2515 ATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCGTCTTACAGCGAATGGTTTCAA 2588
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2589 GATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAAATAGAAGGAATGGCTAATTGTCTCCCAT 2662
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2663 TCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAACAGAAATGCAAAGGAAGTTTATGAATGT 2736
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2737 AGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTATCCAGACAATTACCCATGTACTTATC 2810
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2811 AAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTTGGAAATGAAATTAAAGAGTGTGTTCATG 2884
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2885 GTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACATGATTAAATATGTTTAAGAAGATTAGTTAC 2958
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2959 CATTGAAATTGGTTCTGTCATAAAACAGCATGAGTCTGGTTTTAAATTATCTTTGTATTATGTGTCACATGGTT 3032
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3033 ATTTTTTAAATGAGGATTCACTGACTTGTTTTTATATTGAAAAAAGTTCCACGTATTGTAGAAAACGTAAATAA 3106
Query 499 ------------------ 498
Sbjct 3107 ACTAATATAGACTATTCA 3124
