Nucleotide Global Alignment
Description
- Query:
- TRCN0000489958
- Subject:
- XM_011242577.2
- Aligned Length:
- 1817
- Identities:
- 943
- Gaps:
- 757
Alignment
Query 1 ATGTCCCAGCTCTCCTCCACCCTGAAGCGCTACACAGAATCGGCCCGCTACACAGATGCCCACTATGCCAAGTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGGCTATGGTGCCTACACCCCATCCTCCTATGGGGCCAATCTGGCTGCCTCCTTACTGGAGAAGGAGAAACTTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTTTCAAGCCGGTCCCCACCAGCAGCTTCCTCACCCGTCCCCGTACCTATGGCCCCTCCTCCCTCCTGGACTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACCGGGGCCGCCCCCTGCTGAGACCCGACATCACTGGGGGTGGTAAGCGGGCAGAGAGCCAGACCCGGGGTAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAGCGGCCTTTAGGCAGTGGCCTCAGCGGGGGCAGCGGATTCCCTTATGGAGTGACCAACAACTGCCTCAGCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCTGCCCATCAATGCCTATGACCAGGGGGTGACCCTAACCCAGAAGCTGGACAGCCAATCAGACCTGGCCCGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GATTTCTCCAGCCTCCGGACCTCAGATAGCTACCGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCGGACGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCTACCAGACAGCCAGCTGCCCTGAATACCTGGTCGACT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACCTGGAGAACTATGGTCGCAAGGGCAGTGCATCTCAGGTGCCCTCCCAGGCCCCTCCCTCACGAGTCCCTGAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ATCATCAGCCCAACCTACCGACCCATTGGCCGCTACACGCTGTGGGAGACGGGAAAGGGTCAGGCCCCTGGGCC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAGCCGCTCCAGCTC--CCCGGGAAGAGACGGCATGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAA 812
|..|| |.||||.|.|| || ||||||.||||||||||||||||||||||||||||||||
Sbjct 1 ----------ATGTCGTCTCGGGCACAG--GG---GAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAA 59
Query 813 CCTTGGGAACACGTGCTTCATGAACTCAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGAGAGATTACTGCC 886
|||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||.|||||||||||||||
Sbjct 60 CCTTGGGAACACGTGCTTCATGAACTCAATTCTTCAGTGCCTGAGCAACACCCGAGAGCTGAGAGATTACTGCC 133
Query 887 TCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTTGCAAAA 960
||||||||||.||||||||||||||...||||..|||||..||.|||||.||||||.|||||||||||||||||
Sbjct 134 TCCAGAGGCTGTACATGCGGGACCTCGGCCACACCAGCAGCGCTCACACGGCCCTCATGGAAGAGTTTGCAAAA 207
Query 961 CTAATTCAGACCATATGGACTTCATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG 1034
|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 CTAATCCAGACCATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG 281
Query 1035 ATATGCACCGCGCTTTGTTGGCTATAATCAGCAGGATGCTCAGGAGTTCCTTCGCTTTCTTCTGGATGGGCTCC 1108
||||||.||.|||||..|.||||||||||||||||||||||||||.||||||||.||.|||||||||||.||||
Sbjct 282 ATATGCGCCACGCTTCATGGGCTATAATCAGCAGGATGCTCAGGAATTCCTTCGTTTCCTTCTGGATGGTCTCC 355
Query 1109 ATAACGAGGTGAACCGAGTGACACTGAGACCTAAGTCCAACCCTGAGAACCTCGATCATCTTCCTGATGACGAG 1182
|.||.|||||||||||.|||.||...||.||||||.|||.||||||||.|||.||||||||.||||||||.||.
Sbjct 356 ACAATGAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCATCTCCCTGATGAAGAA 429
Query 1183 AAAGGCCGACAGATGTGGAGAAAATATCTAGAACGGGAAGACAGTAGGATCGGGGATCTCTTTGTTGGGCAGCT 1256
||.||.||||||||||||||.||.|||||.|||.|||||||||||.||||.|||||||||||.|||||||||||
Sbjct 430 AAGGGGCGACAGATGTGGAGGAAGTATCTGGAAAGGGAAGACAGTCGGATTGGGGATCTCTTCGTTGGGCAGCT 503
Query 1257 AAAGAGCTCGCTGACGTGTACAGATTGTGGTTACTGTTCTACGGTCTTCGACCCCTTCTGGGACCTCTCACTGC 1330
.||||||||.||.||.||.||.||||||||.|||||.|||||.||||||||.|||||||||||.|||||..|||
Sbjct 504 GAAGAGCTCCCTCACATGCACCGATTGTGGCTACTGCTCTACAGTCTTCGATCCCTTCTGGGATCTCTCGTTGC 577
Query 1331 CCATTGCTAAGCGAGGTTATCCTGAGGTGACATTAATGGACTGCATGAGGCTCTTCACCAAAGAGGATGTGCTT 1404
||||.||.|||.|||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||..|..|.
Sbjct 578 CCATCGCAAAGAGAGGTTACCCTGAGGTGACGTTAATGGATTGTATGAGGCTCTTCACCAAAGAGGACATATTG 651
Query 1405 GATGGAGATGAAAAGCCAACATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAAAGAAGTTCTCCATCCAGAG 1478
|||||.|||||.||||||||.|||||.||||||||||.|||||||||.||.|||||.||||||||..|||||||
Sbjct 652 GATGGTGATGAGAAGCCAACTTGCTGCCGCTGCCGAGCCAGAAAACGATGCATAAAAAAGTTCTCTGTCCAGAG 725
Query 1479 GTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGAACCAGCAAGCTCACAACAT 1552
||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||||
Sbjct 726 GTTCCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGAACCAGCAAGCTCACAACAT 799
Query 1553 TTGTGAACTTCCCCCTAAGAGACCTGGACTTAAGAGAATTTGCCTCAGAAAACACCAACCATGCTGTTTACAAC 1626
|||||||.|||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||
Sbjct 800 TTGTGAATTTCCCACTAAGAGACCTGGACTTGAGAGAATTTGCTTCAGAAAACACCAACCATGCTGTTTACAAC 873
Query 1627 CTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCTACTGTCGCAGTCCAGGGAC 1700
|||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.|||||.|..||
Sbjct 874 CTGTATGCTGTGTCCAATCACTCCGGAACCACCATGGGAGGCCACTATACAGCCTACTGCCGAAGTCCGGTTAC 947
Query 1701 AGGAGAATGGCACACTTTCAACGACTCCAGCGTCACTCCCATGTCCTCCAGCCAAGTGCGCACCAGCGACGCCT 1774
|||.|||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 948 AGGCGAATGGCACACTTTCAATGATTCCAGTGTCACACCCATGTCCTCCAGCCAAGTGCGCACCAGCGACGCCT 1021
Query 1775 ACCTGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAATG 1815
|..||||||||||.|||||||||||.||.||||||||.|||
Sbjct 1022 ATTTGCTCTTCTATGAACTGGCCAGTCCACCCTCCCGTATG 1062
