Nucleotide Global Alignment
Description
- Query:
- TRCN0000489958
- Subject:
- XM_017313467.1
- Aligned Length:
- 1910
- Identities:
- 1043
- Gaps:
- 730
Alignment
Query 1 ATGTCCCAGCTCTCCTCCACCCTGAAGCGCTACACAGAATCGGCCCGCTACACAGATGCCCACTATGCCAAGTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGGCTATGGTGCCTACACCCCATCCTCCTATGGGGCCAATCTGGCTGCCTCCTTACTGGAGAAGGAGAAACTTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTTTCAAGCCGGTCCCCACCAGCAGCTTCCTCACCCGTCCCCGTACCTATGGCCCCTCCTCCCTCCTGGACTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACCGGGGCCGCCCCCTGCTGAGACCCGACATCACTGGGGGTGGTAAGCGGGCAGAGAGCCAGACCCGGGGTAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAGCGGCCTTTAGGCAGTGGCCTCAGCGGGGGCAGCGGATTCCCTTATGGAGTGACCAACAACTGCCTCAGCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCTGCCCATCAATGCCTATGACCAGGGGGTGACCCTAACCCAGAAGCTGGACAGCCAATCAGACCTGGCCCGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GATTTCTCCAGCCTCCGGACCTCAGATAGCTAC-CGGATAGACCCCAGGAACCTGGGCCGCAGCCCCATGCTGG 517
.|.||.||||| |||| ||| .||||| .|.|||.||..||
Sbjct 1 ------------ATGCGTACCTC------CTACACGG--TGACCC---------TGCCCGAAGAGCC------- 38
Query 518 CCCGGACGCGCAAGGAGCTCTGCACCCTGCAGGGGCTCTACCAGACAGCC----AGCTGCCCTGAATACCTGGT 587
|||.|.|||.|| ||.| ||| ||||| .||| ||||||
Sbjct 39 CCCCGCCGCCCA-----CTTT---CCC-------GCTCT-------CGCCAAGGAGCTGC-------------- 76
Query 588 CGACTACCTGGAGAACTATGGTCGCAAGGGCAGTGCATCTCAGGTGCCCTCCCAGGCCCCTCCCTCACGAGTCC 661
||.||| |.|.|||| |.|.|||| ||||
Sbjct 77 -------------------GGCCGC-----------------GCTCCCCT--CTGTCCCC----------GTCC 102
Query 662 CTGAAATCATCAGC---CCAACCTACCGACCCATTGGCCGCTACACGCTGTGGGAGACGGGAAAGGGTCAGGCC 732
||| |.|| || ||||.| |||||
Sbjct 103 CTG-------CTGCTCTCC-ACCTTC-----------------------GTGGG-------------------- 125
Query 733 CCTGGGCCCAGCCGCTCCAGCTCCCCGGGAAGAGACGGCATGAATTCTAAGAGTGCCCAGGGTCTGGCTGGTCT 806
|||.|.|||| ||.| |.|.||.||||||.||||||||||||||||||||||||||
Sbjct 126 -------------GCTTCTGCTC------AACA-AAGCCAAGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCT 179
Query 807 TCGAAACCTTGGGAACACGTGCTTCATGAACTCAATTCTGCAGTGCCTGAGCAACACTCGGGAGTTGAGAGATT 880
|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||.|||||||||
Sbjct 180 TCGAAACCTTGGGAACACGTGCTTCATGAACTCAATTCTTCAGTGCCTGAGCAACACCCGAGAGCTGAGAGATT 253
Query 881 ACTGCCTCCAGAGGCTCTACATGCGGGACCTGCACCACGGCAGCAATGCACACACAGCCCTCGTGGAAGAGTTT 954
||||||||||||||||.||||||||||||||...||||..|||||..||.|||||.||||||.|||||||||||
Sbjct 254 ACTGCCTCCAGAGGCTGTACATGCGGGACCTCGGCCACACCAGCAGCGCTCACACGGCCCTCATGGAAGAGTTT 327
Query 955 GCAAAACTAATTCAGACCATATGGACTTCATCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGAT 1028
|||||||||||.||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 GCAAAACTAATCCAGACCATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGAT 401
Query 1029 CCAGAGATATGCACCGCGCTTTGTTGGCTATAATCAGCAGGATGCTCAGGAGTTCCTTCGCTTTCTTCTGGATG 1102
||||||||||||.||.|||||..|.||||||||||||||||||||||||||.||||||||.||.||||||||||
Sbjct 402 CCAGAGATATGCGCCACGCTTCATGGGCTATAATCAGCAGGATGCTCAGGAATTCCTTCGTTTCCTTCTGGATG 475
Query 1103 GGCTCCATAACGAGGTGAACCGAGTGACACTGAGACCTAAGTCCAACCCTGAGAACCTCGATCATCTTCCTGAT 1176
|.|||||.||.|||||||||||.|||.||...||.||||||.|||.||||||||.|||.||||||||.||||||
Sbjct 476 GTCTCCACAATGAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCATCTCCCTGAT 549
Query 1177 GACGAGAAAGGCCGACAGATGTGGAGAAAATATCTAGAACGGGAAGACAGTAGGATCGGGGATCTCTTTGTTGG 1250
||.||.||.||.||||||||||||||.||.|||||.|||.|||||||||||.||||.|||||||||||.|||||
Sbjct 550 GAAGAAAAGGGGCGACAGATGTGGAGGAAGTATCTGGAAAGGGAAGACAGTCGGATTGGGGATCTCTTCGTTGG 623
Query 1251 GCAGCTAAAGAGCTCGCTGACGTGTACAGATTGTGGTTACTGTTCTACGGTCTTCGACCCCTTCTGGGACCTCT 1324
||||||.||||||||.||.||.||.||.||||||||.|||||.|||||.||||||||.|||||||||||.||||
Sbjct 624 GCAGCTGAAGAGCTCCCTCACATGCACCGATTGTGGCTACTGCTCTACAGTCTTCGATCCCTTCTGGGATCTCT 697
Query 1325 CACTGCCCAT----------TGCTAAGC---------------------------------------------- 1342
|..||||||| ||||.|||
Sbjct 698 CGTTGCCCATCGCAAAGGTATGCTCAGCTGTGGTCCCCACTTCAGCATTGCGCTCGGGGCTCAGTGAGGTCGTG 771
Query 1343 -------------------------------GAGGTTATCCTGAGGTGACATTAATGGACTGCATGAGGCTCTT 1385
|||||||.|||||||||||.||||||||.||.|||||||||||
Sbjct 772 ACCTCTGACCTGGACCCTTTTCCTTTGCAGAGAGGTTACCCTGAGGTGACGTTAATGGATTGTATGAGGCTCTT 845
Query 1386 CACCAAAGAGGATGTGCTTGATGGAGATGAAAAGCCAACATGCTGTCGCTGCCGAGGCAGAAAACGGTGTATAA 1459
||||||||||||..|..|.|||||.|||||.||||||||.|||||.||||||||||.|||||||||.||.||||
Sbjct 846 CACCAAAGAGGACATATTGGATGGTGATGAGAAGCCAACTTGCTGCCGCTGCCGAGCCAGAAAACGATGCATAA 919
Query 1460 AGAAGTTCTCCATCCAGAGGTTCCCAAAGATCTTGGTGCTCCATCTGAAGCGGTTCTCAGAATCCAGGATCCGA 1533
|.||||||||..|||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||
Sbjct 920 AAAAGTTCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGA 993
Query 1534 ACCAGCAAGCTCACAACATTTGTGAACTTCCCCCTAAGAGACCTGGACTTAAGAGAATTTGCCTCAGAAAACAC 1607
||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct 994 ACCAGCAAGCTCACAACATTTGTGAATTTCCCACTAAGAGACCTGGACTTGAGAGAATTTGCTTCAGAAAACAC 1067
Query 1608 CAACCATGCTGTTTACAACCTGTACGCTGTGTCCAATCACTCCGGAACCACCATGGGTGGCCACTATACAGCCT 1681
||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1068 CAACCATGCTGTTTACAACCTGTATGCTGTGTCCAATCACTCCGGAACCACCATGGGAGGCCACTATACAGCCT 1141
Query 1682 ACTGTCGCAGTCCAGGGACAGGAGAATGGCACACTTTCAACGACTCCAGCGTCACTCCCATGTCCTCCAGCCAA 1755
||||.||.|||||.|..|||||.|||||||||||||||||.||.|||||.|||||.||||||||||||||||||
Sbjct 1142 ACTGCCGAAGTCCGGTTACAGGCGAATGGCACACTTTCAATGATTCCAGTGTCACACCCATGTCCTCCAGCCAA 1215
Query 1756 GTGCGCACCAGCGACGCCTACCTGCTCTTCTACGAACTGGCCAGCCCGCCCTCCCGAATG 1815
||||||||||||||||||||..||||||||||.|||||||||||.||.||||||||.|||
Sbjct 1216 GTGCGCACCAGCGACGCCTATTTGCTCTTCTATGAACTGGCCAGTCCACCCTCCCGTATG 1275
