Nucleotide Global Alignment

Description

• Query: TRCN0000491287
• Subject: XM_006532408.3
• Aligned Length: 1331
• Identities: 945
• Gaps: 228

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148
            |         |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||..|||.
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC  115

Query  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGA----  218
            |||||.|.||.||.|||.|.||||||||.||.||.||.|||||.||||||||||||||||||||.||.||    
Sbjct  116  CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC  189

Query  219  --------------------------------------------------------------------------  218
                                                                                      
Sbjct  190  GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA  263

Query  219  ---------AGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  283
                     |||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct  264  AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC  337

Query  284  AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA  357
            |||||||..|||.|      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct  338  AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA  405

Query  358  A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT  425
            |      ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct  406  ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT  479

Query  426  TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC  498
            .||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct  480  CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC  552

Query  499  GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC  572
            ||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct  553  GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC  626

Query  573  CCGGGAGCCCAAGAAGGTGGCAGTTGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA  646
            ||||||||||||||||||||||||.|||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct  627  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA  700

Query  647  CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG  720
            |.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct  701  CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG  774

Query  721  CCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAA  794
                                                                                      
Sbjct  775  --------------------------------------------------------------------------  774

Query  795  GGATAATATCAAACACGTCCCGGGAGGCGGCAATGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGA  868
                               ||.|||||.|||||.|||||||||||||||||.||.||.|||||||||||.||||
Sbjct  775  -------------------CCAGGAGGTGGCAAGGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGA  829

Query  869  CCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAG  942
            ||||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct  830  CCTCCAAGTGTGGCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAG  903

Query  943  CTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAA  1016
            ||.||||||||||||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.||
Sbjct  904  CTGGACTTCAAGGACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAA  977

Query 1017  TAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCG  1090
            |||.|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|
Sbjct  978  TAAGAAGATTGAAACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTG  1051

Query 1091  TGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATC  1164
            ||||.|||||.||.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||
Sbjct 1052  TGTATAAGTCACCCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATC  1125

Query 1165  GACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTGG  1237
            ||||||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||.||||||||||||||||| 
Sbjct 1126  GACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG-  1197