Nucleotide Global Alignment

Description

Query:
TRCN0000491360
Subject:
NR_146951.1
Aligned Length:
2217
Identities:
1040
Gaps:
1177

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCATCCGGGCTCCCGGCAGCGGCGCTGCGGCGGCTCGCGGGAGACGCTGCGCGCGGGGCTAGCGGGCGGCGGA  74

Query    1  ------------------------------------------------------------ATGGCAGGCTCCCT  14
                                                                        ||||||||||||||
Sbjct   75  GCGGACGGCGACGGGGCGCTCTCGGGCTGCCGGCGGGGCCGAGCGCCGCGCGTCCCGAGCATGGCAGGCTCCCT  148

Query   15  GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA  222

Query   89  TTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA  296

Query  163  GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG  370

Query  237  ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG  444

Query  311  AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA  518

Query  385  ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG  592

Query  459  GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA  666

Query  533  TCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT  606
            |||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCCCAGT----GAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT  736

Query  607  TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT  810

Query  681  TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT  754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT  884

Query  755  GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC  828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC  958

Query  829  CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA  902
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA  1032

Query  903  TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAG-------------------------  951
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct 1033  TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCGTACTCTCAGGAGGCTCCA  1106

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1107  CCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGATGCTAGGCTGAGGCTCAGC  1180

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1181  GAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTCACGCATCACATGCAGCGCTA  1254

Query  952  -------------------------------------CCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT  988
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct 1255  CGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT  1328

Query  989  ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC------------------  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct 1329  ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCCTAGTGTCTGCCTGAACGC  1402

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1403  GTCGTTCGATGGTGTCACGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGGCCGCCGTTCTGTAAATAGCG  1476

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1477  ACGTCGGTGTTGCTGCCCAGCAGCGTGCTTGCATTGCCGGTGCATGAGGCGCGGCGCGGGCCCTTCAGTAAAAG  1550

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1551  CCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTCCTCCTTCTCCCGCCCTCCTCACCCTCGCTCTCCCTCC  1624

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1625  TCCTCCTCCTCCGAGCTGCTAGCTGACAAATACAATTCTGAAGGAATCCAAATGTGACTTTGAAAATTGTTAGA  1698

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1699  GAAAACAACATTAGAAAATGGCGCAAAATCGTTAGGTCCCAGGAGAGAATGTGGGGGCGCAAACCCTTTTCCTC  1772

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1773  CCAGCCTATTTTTGTAAATAAAATGTTTAAACTTGAAATACAAATCGATGTTTATATTTCCTATCATTTTGTAT  1846

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1847  TTTATGGTATTTGGTACAACTGGCTGATACTAAGCACGAATAGATATTGATGTTATGGAGTGCTGTAATCCAAA  1920

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1921  GTTTTTAATTGTGAGGCATGTTCTGATATGTTTATAGGCAAACAAATAAAACAGCAAACTTTTTTGCCACATGT  1994

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1995  TTGCTAGAAAATGATTATACTTTATTGGAGTGACATGAAGTTTGAACACTAAACAGTAATGTATGAGAATTACT  2068

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 2069  ACAGATACATGTATCTTTTAGTTTTTTTTGTTTGAACTTTCTGGAGCTGTTTTATAGAAGATGATGGTTTGTTG  2142

Query 1045  -----------------------------------------------------------------------  1044
                                                                                   
Sbjct 2143  TCGGTGAGTGTTGGATGAAATACTTCCTTGCACCATTGTAATAAAAGCTGTTAGAATATTTGTAAATATCT  2213

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