Nucleotide Global Alignment
Description
- Query:
- TRCN0000491429
- Subject:
- XM_006532115.3
- Aligned Length:
- 1443
- Identities:
- 817
- Gaps:
- 540
Alignment
Query 1 ATGCGGCATTCCAAAAGAACTCACTGTCCTGATTGGGATAGCAGAGAAAGCTGGGGACATGAAAGCTATCGTGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AAGTCACAAGCGGAAGAGGAGATCTCATAGTAGCACACAAGAGAACAGGCATTGTAAACCACATCACCAGTTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGAATCTGATTGTCATTATTTAGAAGCAAGGTCCTTGAATGAGCGAGATTATCGGGACCGGAGATACGTTGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAATACAGGAATGACTACTGTGAAGGATATGTTCCTAGACATTATCACAGAGACATTGAAAGCGGGTATCGAAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCACTGCAGTAAATCTTCAGTCCGCAGCAGGAGAAGCAGTCCTAAAAGGAAGCGCAATAGACACTGTTCAAGTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATCAGTCACGTTCGAAGAGCCACCGAAGGAAAAGATCCAGGAGTATAGAGGATGATGAGGAGGGTCACCTGATC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGTCAAAGTGGAGACGTTCTAAGAGCAAGATATGAAATCGTGGACACTTTGGGTGAAGGAGCCTTTGGCAAAGT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGTAGAGTGCATTGATCATGGCATGGATGGCATGCATGTAGCAGTGAAAATCGTAAAAAATGTAGGCCGTTACC 592
|||||||||.|.|||||||||||||||||.||||||||||||||||||||||
Sbjct 1 ----------------------ATGGATGGCTTACATGTAGCAGTGAAAATTGTAAAAAATGTAGGCCGTTACC 52
Query 593 GTGAAGCAGCTCGTTCAGAAATCCAAGTATTAGAGCACTTAAATAGTACTGATCCCAATAGTGTCTTCCGATGT 666
|.||.|||||||||||.||||||||||||||.||||||||.||.||.|||||.|||||.||||||||||||||.
Sbjct 53 GGGAGGCAGCTCGTTCTGAAATCCAAGTATTGGAGCACTTGAACAGCACTGACCCCAACAGTGTCTTCCGATGC 126
Query 667 GTCCAGATGCTAGAATGGTTTGATCATCATGGTCATGTTTGTATTGTGTTTGAACTACTGGGACTTAGTACTTA 740
||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 127 GTCCAGATGCTAGAGTGGTTTGATCATCATGGTCATGTTTGTATTGTGTTTGAGCTGCTGGGACTTAGTACCTA 200
Query 741 CGATTTCATTAAAGAAAACAGCTTTCTGCCATTTCAAATTGACCACATCAGGCAGATGGCGTATCAGATCTGCC 814
.|||||.|||||||||||.||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||||
Sbjct 201 TGATTTTATTAAAGAAAATAGTTTTCTGCCATTTCAAATTGATCACATCAGGCAAATGGCTTATCAGATCTGCC 274
Query 815 AGTCAATAAATTTTTTACATCATAATAAATTAACCCATACAGATCTGAAGCCTGAAAATATTTTGTTTGTGAAG 888
||||.|||||||||||||||||||||||||||||.||.||.||.||.||.||||||||||||||.|||||||||
Sbjct 275 AGTCTATAAATTTTTTACATCATAATAAATTAACACACACGGACCTAAAACCTGAAAATATTTTATTTGTGAAG 348
Query 889 TCTGACTATGTAGTCAAATATAATTCTAAAATGAAACGTGATGAACGCACACTGAAAAACACAGATATCAAAGT 962
||||||||||||||||||||.|||||||||||||||||.|||||.||||||.||||||||||||||||||||||
Sbjct 349 TCTGACTATGTAGTCAAATACAATTCTAAAATGAAACGAGATGAGCGCACATTGAAAAACACAGATATCAAAGT 422
Query 963 TGTTGACTTTGGAAGTGCAACGTATGATGATGAACATCACAGTACTTTGGTGTCTACCCGGCACTACAGAGCTC 1036
||||||.||||||||||||||.|||||.||.||||||||.||||||||||||||.||..||||||||||.||||
Sbjct 423 TGTTGATTTTGGAAGTGCAACATATGACGACGAACATCATAGTACTTTGGTGTCCACAAGGCACTACAGGGCTC 496
Query 1037 CCGAGGTCATTTTGGCTTTAGGTTGGTCTCAGCCTTGTGATGTTTGGAGCATAGGTTGCATTCTTATTGAATAT 1110
|.|||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||.||.
Sbjct 497 CAGAGGTCATTTTGGCTCTAGGTTGGTCTCAGCCTTGTGATGTTTGGAGCATAGGCTGCATTCTTATTGAGTAC 570
Query 1111 TACCTTGGTTTCACAGTCTTTCAGACTCATGATAGTAAAGAGCACCTGGCAATGATGGAACGAATATTAGGACC 1184
||||||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||.||.||.||||||||
Sbjct 571 TACCTTGGGTTCACAGTCTTTCAGACCCACGATAGTAAAGAGCACCTGGCAATGATGGAGCGGATCTTAGGACC 644
Query 1185 CATACCACAACACATGATTCAGAAAACAAGAAAACGCAAGTATTTTCACCATAACCAGCTAGATTGGGATGAAC 1258
|||.|||..|||.|||||.|||||.|||||.||||||||||||||.|||||||||||||||||||||||.||.|
Sbjct 645 CATCCCAGCACATATGATCCAGAAGACAAGGAAACGCAAGTATTTCCACCATAACCAGCTAGATTGGGACGAGC 718
Query 1259 ACAGTTCTGCTGGTAGATATGTTAGGAGACGCTGCAAACCGTTGAAGGAATTTATGCTTTGTCATGATGAAGAA 1332
|.|||||.|||||.|||||||||||||||||||||||.|||||.||||||||||||||.||||||||.|||||.
Sbjct 719 ATAGTTCAGCTGGGAGATATGTTAGGAGACGCTGCAAGCCGTTAAAGGAATTTATGCTGTGTCATGACGAAGAG 792
Query 1333 CATGAGAAACTGTTTGACCTGGTTCGAAGAATGTTAGAATATGATCCAACTCAAAGAATTACCTTGGATGAAGC 1406
||||||||.||||||||||||||||||||||||||.||.|||||.|||.|...|||.||.||||||||||||||
Sbjct 793 CATGAGAAGCTGTTTGACCTGGTTCGAAGAATGTTGGAGTATGACCCAGCGAGAAGGATCACCTTGGATGAAGC 866
Query 1407 ATTGCAGCATCCTTTCTTTGACTTATTAAAAAAGAAA 1443
|||||||||.||||||||||||||||||||||.||||
Sbjct 867 ATTGCAGCACCCTTTCTTTGACTTATTAAAAAGGAAA 903
