Nucleotide Global Alignment

Description

• Query: TRCN0000491457
• Subject: NM_001323320.2
• Aligned Length: 1401
• Identities: 722
• Gaps: 483

Alignment

Query    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA  148
                                                    |||||||.||||||...|||||||.|.||.||.|
Sbjct    1  ----------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATTTTTATA  34

Query  149  GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT  222
            ||||.||..|.|||||.||.||.||||||||.||.||.||.||.||||||.||||.|||||.|||||.||.|||
Sbjct   35  GTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGCT  108

Query  223  CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296
            ||.||.|||||.||.||.||.||||||||..|.|||||.||||||||.||.||.||||||||.|||.||||.||
Sbjct  109  CAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCATT  182

Query  297  TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370
            ||||||.||.||.|||||||||.|.||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.|
Sbjct  183  TCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATAA  256

Query  371  TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG  444
            ||.|..|.||.|||||.||||||||.||||||.|.||.||.||.||.||||||||||||.||||.|||||.||.
Sbjct  257  TTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCTC  330

Query  445  ATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAA  517
            ||||||||.|| ||| ||.|||||||||||||||||..||||.|||||..|||||||.|||||.||.||.||.|
Sbjct  331  ATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA  403

Query  518  TGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTC  591
            ||.|||||||.||.||||||||.||||||||||||||||||||..||||.|||||.||.|||||.||.|||||.
Sbjct  404  TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA  477

Query  592  AAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCC  665
            ||.|||||||||||.|||||.||.||.|||||.||.|||||||||||.|||||.||.||.||.||||||||.||
Sbjct  478  AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC  551

Query  666  ATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATAT  739
            .|||||.|||||.||.||.||||||||.||.|||||||||||.||.||||||||||||||.|||          
Sbjct  552  TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAAC----------  615

Query  740  GGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTGACCAG  813
                                                                                      
Sbjct  616  --------------------------------------------------------------------------  615

Query  814  TGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGTAAGAAA  887
                                                                                      
Sbjct  616  --------------------------------------------------------------------------  615

Query  888  CTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCCCAGCAG  961
                                                                                  ||.|
Sbjct  616  ----------------------------------------------------------------------GCTG  619

Query  962  ACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGACCCAGCA  1035
            ||||.||.|||||.|||||.||||||||.||.||.|||||.|||||.||.||.|||||.||.||.||..||.|.
Sbjct  620  ACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCATCT  693

Query 1036  AAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGTGGAGGC  1109
            |||||.||.||.||.||.||.||..|.||.||.||.||||||||.|||||||||||.||..|.||||..||.||
Sbjct  694  AAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAAGC  767

Query 1110  GCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAACTTATCT  1183
            .||.|||||..||||...||||||||||||.||||||||.|||||||||||.|||||.|||||||||.|.||.|
Sbjct  768  TCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGATAT  841

Query 1184  ACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTTCAGCACAG  1257
            |.||||||||.|||.|.|..||.||.|..||.||.|||||.||..||...||.|||||.|||||||     .||
Sbjct  842  ATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTT-----TAG  910

Query 1258  GTGCAGCAG-----------------------------------------------------------------  1266
            |||||||||                                                                 
Sbjct  911  GTGCAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGTCAACA  984

Query 1267  ---------------------------------------------------------------------  1266
                                                                                 
Sbjct  985  GATCCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA  1053