Nucleotide Global Alignment
Description
- Query:
- TRCN0000491501
- Subject:
- NM_001177382.2
- Aligned Length:
- 3119
- Identities:
- 771
- Gaps:
- 2170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGATTTCGGGTTTGGGGTGCTGCAGACCGCCCCGCTCCGAAGTAGCAGTCCTGGGCCCCTGTTCTGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGTATGGTCCTTACGCCGTGGGGTCCGTCAACCCGCTGCCCTCCGCCACGCCCTTCGGCCCACTGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCACCGTTGCCTGTCACCGGCTTCTTAGAGGCCGCCTCCCCCTTCTCCGTCCCCCTCGGCGGCGGCGCGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCGGCCGCCGCCGCTTCCTCTTCCTCCCCGTTCCTGGCGCATCAGCAGACCATGCAGGATGAGCTGCTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAAACTCCCCGACCACCACCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCACCCCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGCAGGACTTCAGTAAGCGGCAGCAGCAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGAGCAGCCAGAAGAGGAAAGAGTTCAGCCCTCCCCACCTTCCCCACCCTCCGGACTCGAAGCCGCCGCCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCCTCCGCCGCTCCACTGCCCCGGTCGGTTCAGCCCGCCGCCGCCGCCAGCCGGCCCGCTCCTCCAGCCGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCTCGCTCAGCGCCAGCAGCAACAGCCGCCGCAGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACTTCGCCCCGCGGCAGCGTCCGGCAGACCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCGGCGCCGCCACGGAGGCGCGGGCAGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAATGCGGGCTTGGCCTCCTCGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTCCCCCAACCACCCTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTCAACAGTCCCAGTAACCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTTCCACACCCGGGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGTCGCCGCCGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGCCGCCCAGCCCCGAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCGCACGGCTGCACTGGGCTCAGCGTTCCGACGAGCGGCGGCGGCGGCGGCGGCTTCGGCGGCCCCTTCTCGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACCGCTGTGCCCCCTCCGCCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATACACTCTTACCCTTACAGGTGAGATCTAGTTTGCAGTTGCCAGCTTGGGGCTCAGATTCACTCCAAGATAGT 1998
Query 1 ------------------------------------------------------------------ATGCACTC 8
||||||||
Sbjct 1999 TGGTGCACTGCAGCCGGAACATCCAGAATAGACCAGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTC 2072
Query 9 ACTGGAGAGTTCACTCATTGACATAATGAGAGCTGAAAATGATACCATTAA----------------------- 59
..||||.|.|||.||.||.||.||.||||||||.||..|||||.|..||||
Sbjct 2073 TTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATC 2146
Query 60 ----------------------------------------------------AGGTCAGTCTTCACTGTTTCCA 81
|||||..|||||.||.||||||
Sbjct 2147 CAGGAACTGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCCCTCTTTCCA 2220
Query 82 ATGGAAGATGGATT-CTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGG--------GTTCACC 146
||.||.|||||.|| ||| ||||||||.|...|.||||| ||| ||| .||||||
Sbjct 2221 ATAGATGATGGCTTGCTT-GATGATGGTCACAGTGATCA----------AGT----TGGAGTTTTAAATTCACC 2279
Query 147 TCAC---TGCTTCAG-TCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTG 216
||| |..||||| ||||||.|||||.||..||.|.|||||.|..||||||||.||.|||||.||.||..|.
Sbjct 2280 -CACCTGTTATTCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTT 2352
Query 217 CCTCCAGACATTGATGAAGATGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCA 290
||||||||.||||||||||||||.||.||.|||||.||..|..|.|||||.|||.||.|.||.|||||||||||
Sbjct 2353 CCTCCAGATATTGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCA 2426
Query 291 TAAAGCTGAGAGCAAATCCTATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGC 364
||||||.||.|||||.|||||||||||.||.||||||||||||||.||.||.||||||||.||.|||||.||.|
Sbjct 2427 TAAAGCAGAAAGCAAGTCCTATTTTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTC 2500
Query 365 AGGCTCTCATTGATGCATGCATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGAT 438
||||.|||||||||||.||.|||||||||||||||||||||||.||.|||||.||.||.||.|||||||||||.
Sbjct 2501 AGGCACTCATTGATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGAC 2574
Query 439 AAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCC 512
||.|||||.||.||.||.|||||||||.|.|||||.|||||.|||||.|||||||||||.|||||..|.||.||
Sbjct 2575 AAACCAGTTCAAATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCC 2648
Query 513 ACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGC 586
.||||||||.||.||||||||.|||||||||.|.||||||.|.||||||||.|||||.|||||.|||||.||||
Sbjct 2649 CCGAAAAACAATTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGC 2722
Query 587 TATATGGAGGTGTGTGCTACGCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTT 660
|.|||||.||.||.||.||.||.||.||||||||.||.|||||||||||||||||||||||.||||||.|||||
Sbjct 2723 TGTATGGTGGAGTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTT 2796
Query 661 GCGTTCTCTAATCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGA 734
||.|||||.|||||.|||||.||.||.|||||.||.|||||.||.|||||||||||.||||||||.||.||.||
Sbjct 2797 GCTTTCTCCAATCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGA 2870
Query 735 TAAACGGGTGGAAGTTAAGCCATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGG 808
||||||.|||||.||.|||||||||||..|.|||||.|||.|||||||||||||.|||||.||.||.|||||.|
Sbjct 2871 TAAACGTGTGGAGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTG 2944
Query 809 GGAAATTTGCTCCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATC 882
|.|||||||||||.|||||.|||||.|||||.||.||.|||||||||||||||||.|.|||.|||||...||||
Sbjct 2945 GAAAATTTGCTCCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATC 3018
Query 883 CATTCTCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCA-T 955
||.|||||||||||..|.||.|||||.|||||..||||.||||||||.|.|||.|||||.||.||.| |.|| |
Sbjct 3019 CACTCTCGTGCTGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGA-TCCACT 3091
Query 956 TCCGCTGGAAC 966
|||||||||||
Sbjct 3092 TCCGCTGGAAC 3102
