Nucleotide Global Alignment
Description
- Query:
- TRCN0000491501
- Subject:
- NM_182485.3
- Aligned Length:
- 3095
- Identities:
- 772
- Gaps:
- 2146
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGATTTCGGGTTTGGGGTGCTGCAGACCGCCCCGCTCCGAAGTAGCAGTCCTGGGCCCCTGTTCTGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGTATGGTCCTTACGCCGTGGGGTCCGTCAACCCGCTGCCCTCCGCCACGCCCTTCGGCCCACTGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCACCGTTGCCTGTCACCGGCTTCTTAGAGGCCGCCTCCCCCTTCTCCGTCCCCCTCGGCGGCGGCGCGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCGGCCGCCGCCGCTTCCTCTTCCTCCCCGTTCCTGGCGCATCAGCAGACCATGCAGGATGAGCTGCTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAAACTCCCCGACCACCACCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCACCCCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGCAGGACTTCAGTAAGCGGCAGCAGCAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGAGCAGCCAGAAGAGGAAAGAGTTCAGCCCTCCCCACCTTCCCCACCCTCCGGACTCGAAGCCGCCGCCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCCTCCGCCGCTCCACTGCCCCGGTCGGTTCAGCCCGCCGCCGCCGCCAGCCGGCCCGCTCCTCCAGCCGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCTCGCTCAGCGCCAGCAGCAACAGCCGCCGCAGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACTTCGCCCCGCGGCAGCGTCCGGCAGACCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCGGCGCCGCCACGGAGGCGCGGGCAGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAATGCGGGCTTGGCCTCCTCGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTCCCCCAACCACCCTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTCAACAGTCCCAGTAACCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTTCCACACCCGGGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGTCGCCGCCGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGCCGCCCAGCCCCGAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCGCACGGCTGCACTGGGCTCAGCGTTCCGACGAGCGGCGGCGGCGGCGGCGGCTTCGGCGGCCCCTTCTCGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACCGCTGTGCCCCCTCCGCCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATACACTCTTACCCTTACAGGTGAGATCTAGTTTGCAGTTGCCAGCTTGGGGCTCAGATTCACTCCAAGATAGT 1998
Query 1 ------------------------------------------------------------------ATGCACTC 8
||||||||
Sbjct 1999 TGGTGCACTGCAGCCGGAACATCCAGAATAGACCAGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTC 2072
Query 9 ACTGGAGAGTTCACTCATTGACATAATGAGAGCTGAAAATGATACCATTAAAGGTC-----AG----------- 66
..||||.|.|||.||.||.||.||.||||||||.||..|||||.|..||||.|||| ||
Sbjct 2073 TTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATC 2146
Query 67 -----------------------------------TCTTCACTGTTTCCAATGGAAGATGGATT-CTTGGATGA 104
|||||.||.||||||||.||.|||||.|| ||| |||||
Sbjct 2147 CAGGAACTGACAATCTGTTGATGTTAAATGGTCGTTCTTCCCTCTTTCCAATAGATGATGGCTTGCTT-GATGA 2219
Query 105 TGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGG--------GTTCACCTCAC---TGCTTCAG-TCACCAGA 166
|||.|...|.||||| ||| ||| .|||||| ||| |..||||| ||||||.|
Sbjct 2220 TGGTCACAGTGATCA----------AGT----TGGAGTTTTAAATTCACC-CACCTGTTATTCAGCTCACCAAA 2278
Query 167 ATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTGCCTCCAGACATTGATGAAGATGAG 240
||||.||..||.|.|||||.|..||||||||.||.|||||.||.||..|.||||||||.||||||||||||||.
Sbjct 2279 ATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATATTGATGAAGATGAA 2352
Query 241 ATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAAATCCTATTT 314
||.||.|||||.||..|..|.|||||.|||.||.|.||.|||||||||||||||||.||.|||||.||||||||
Sbjct 2353 ATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAAGCAAGTCCTATTT 2426
Query 315 TCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG 388
|||.||.||||||||||||||.||.||.||||||||.||.|||||.||.|||||.|||||||||||.||.||||
Sbjct 2427 TCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATTGATGCTTGTATTG 2500
Query 389 AAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCTTGG 462
|||||||||||||||||||.||.|||||.||.||.||.|||||||||||.||.|||||.||.||.||.||||||
Sbjct 2501 AAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCAAATACGTCCTTGG 2574
Query 463 AATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGG 536
|||.|.|||||.|||||.|||||.|||||||||||.|||||..|.||.||.||||||||.||.||||||||.||
Sbjct 2575 AATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAATTTTTGTTGGAGG 2648
Query 537 TGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGCTATATGGAGGTGTGTGCTACGCTG 610
|||||||.|.||||||.|.||||||||.|||||.|||||.|||||.|||||.|||||.||.||.||.||.||.|
Sbjct 2649 TGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGAGTTTGTTATGCAG 2722
Query 611 GGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTTGCGTTCTCTAATCAACAGAGTTAC 684
|.||||||||.||.|||||||||||||||||||||||.||||||.|||||||.|||||.|||||.|||||.||.
Sbjct 2723 GAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAATCAGCAGAGCTAT 2796
Query 685 ATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGATAAACGGGTGGAAGTTAAGCCATA 758
||.|||||.||.|||||.||.|||||||||||.||||||||.||.||.||||||||.|||||.||.||||||||
Sbjct 2797 ATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGGAGGTAAAGCCATA 2870
Query 759 TGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGGGGAAATTTGCTCCATTTTTCTGTG 832
|||..|.|||||.|||.|||||||||||||.|||||.||.||.|||||.||.|||||||||||.|||||.||||
Sbjct 2871 TGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCTCCCTTTTTTTGTG 2944
Query 833 CTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAGGGAATTC 906
|.|||||.||.||.|||||||||||||||||.|.|||.|||||...||||||.|||||||||||..|.||.|||
Sbjct 2945 CCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGCTGGACGTGAGTTC 3018
Query 907 CACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCA-TTCCGCTGGAAC 966
||.|||||..||||.||||||||.|.|||.|||||.||.||.| |.|| ||||||||||||
Sbjct 3019 CATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGA-TCCACTTCCGCTGGAAC 3078
