Nucleotide Global Alignment

Description

• Query: TRCN0000491501
• Subject: XM_017007733.1
• Aligned Length: 1406
• Identities: 771
• Gaps: 457

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGAATCCCAGGAACTATGAATCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATTTACTCGCTCAACTCCATCAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTAATACACTCTTACCCTTACAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTAAGAATGGTGAGATCTAGTTTGCAGTTGCCAGCTTGGGGCTCAGATTCACTCCAAGATAGTTGGTGCACTGC  296

Query    1  -------------------------------------------------------ATGCACTCACTGGAGAGTT  19
                                                                   ||||||||..||||.|.||
Sbjct  297  AGCCGGAACATCCAGAATAGACCAGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTCTTTGGAAAATT  370

Query   20  CACTCATTGACATAATGAGAGCTGAAAATGATACCATTAA----------------------------------  59
            |.||.||.||.||.||||||||.||..|||||.|..||||                                  
Sbjct  371  CCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATCCAGGAACTGAC  444

Query   60  -----------------------------------------AGGTCAGTCTTCACTGTTTCCAATGGAAGATGG  92
                                                     |||||..|||||.||.||||||||.||.|||||
Sbjct  445  AATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCCCTCTTTCCAATAGATGATGG  518

Query   93  ATT-CTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGG--------GTTCACCTCAC---TGCT  154
            .|| ||| ||||||||.|...|.|||||          |||    |||        .|||||| |||   |..|
Sbjct  519  CTTGCTT-GATGATGGTCACAGTGATCA----------AGT----TGGAGTTTTAAATTCACC-CACCTGTTAT  576

Query  155  TCAG-TCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTGCCTCCAGACAT  227
            |||| ||||||.|||||.||..||.|.|||||.|..||||||||.||.|||||.||.||..|.||||||||.||
Sbjct  577  TCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATAT  650

Query  228  TGATGAAGATGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCATAAAGCTGAGA  301
            ||||||||||||.||.||.|||||.||..|..|.|||||.|||.||.|.||.|||||||||||||||||.||.|
Sbjct  651  TGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAA  724

Query  302  GCAAATCCTATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGCAGGCTCTCATT  375
            ||||.|||||||||||.||.||||||||||||||.||.||.||||||||.||.|||||.||.|||||.||||||
Sbjct  725  GCAAGTCCTATTTTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATT  798

Query  376  GATGCATGCATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA  449
            |||||.||.|||||||||||||||||||||||.||.|||||.||.||.||.|||||||||||.||.|||||.||
Sbjct  799  GATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCA  872

Query  450  GATTCGGCCTTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCCACGAAAAACTA  523
            .||.||.|||||||||.|.|||||.|||||.|||||.|||||||||||.|||||..|.||.||.||||||||.|
Sbjct  873  AATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAA  946

Query  524  TATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGCTATATGGAGGT  597
            |.||||||||.|||||||||.|.||||||.|.||||||||.|||||.|||||.|||||.|||||.|||||.||.
Sbjct  947  TTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGA  1020

Query  598  GTGTGCTACGCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTTGCGTTCTCTAA  671
            ||.||.||.||.||.||||||||.||.|||||||||||||||||||||||.||||||.|||||||.|||||.||
Sbjct 1021  GTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAA  1094

Query  672  TCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGATAAACGGGTGG  745
            |||.|||||.||.||.|||||.||.|||||.||.|||||||||||.||||||||.||.||.||||||||.||||
Sbjct 1095  TCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGG  1168

Query  746  AAGTTAAGCCATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGGGGAAATTTGCT  819
            |.||.|||||||||||..|.|||||.|||.|||||||||||||.|||||.||.||.|||||.||.|||||||||
Sbjct 1169  AGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCT  1242

Query  820  CCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATCCATTCTCGTGC  893
            ||.|||||.|||||.|||||.||.||.|||||||||||||||||.|.|||.|||||...||||||.||||||||
Sbjct 1243  CCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGC  1316

Query  894  TGGCAGGGAATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCA-TTCCGCTGGAAC  966
            |||..|.||.|||||.|||||..||||.||||||||.|.|||.|||||.||.||.| |.|| ||||||||||||
Sbjct 1317  TGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGA-TCCACTTCCGCTGGAAC  1389