Nucleotide Global Alignment
Description
- Query:
- TRCN0000491519
- Subject:
- XM_006521013.2
- Aligned Length:
- 2589
- Identities:
- 838
- Gaps:
- 1632
Alignment
Query 1 ATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAAGGACCTGACGCCTACCCATGTCCTGCAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TACATGAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGAGAGTCGGGCATCCAGAGTTCGAGCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCCTCTTTGGCTGCCTGCGCCCTGTCTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGAGGTCCCCTTTGAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAATCCTGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTTCCTGGGGCGCTTCCACGGGGAGGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACAT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CATCACTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCCAGGGCCAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TGTATGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGTTGACTGGTCCATGGGCATCGCTGGT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GGCATGAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAACATGCTAATCACCTACGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CGATGTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GGACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGAGAAGGTCGACATCTGGTCCTTT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GGCGTGGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGACGTAGATTCCTCAGCCATTATCTGGGG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGT 1036
|||||||.||.||.||.||||||||||
Sbjct 1 -----------------------------------------------ATGGTTTTAAAATTCTACTTCGCCAGT 27
Query 1037 GCTGGAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCTGCATCTGGACATTGCCTCAGCTGAT 1110
|||||||.||||||||||||||||||||||||||||||||||||.|||||||.||||||||.|||||.||||||
Sbjct 28 GCTGGAACAGCAAACCACGAAATCGCCCATCATTCCGACAGATCTTGCTGCACCTGGACATCGCCTCCGCTGAT 101
Query 1111 GTACTCTCCACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGGCGGGAA-----------GAAGTAAAA 1173
||.|||||.||||||||||||||||||||||||||||| ||.|||| |.|||
Sbjct 102 GTGCTCTCTACACCCCAGGAGACTTACTTTAAGTCCCA---------GCAGGAACCATTCATCATGGAGT---- 162
Query 1174 CTGCACTTTGAAAAG------ATTAAGTCAGAAGGGA--CCTGTCTGCACCGCCT-AGAAGAGGAACTGGTGAT 1238
|||...|||.|| .||..|.||.|||.|| ||.| || ||||| | .|||.|..|.||
Sbjct 163 ---CACAGAGAACAGGGTCCATTTCGGCCACAAGCGAACCCAG-CT-CACCG--TGGGAAAATCATCT------ 223
Query 1239 GAGGAGGAGGGAGGAGC----TCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAGCC 1308
|| |||||||.|||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 224 ---------------GCCCTTTCAGACATGCCCTGGACATCAGGGAGCACTATGAACGGAAGTTGGAGAGAGCC 282
Query 1309 AACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGA 1382
|||||||||||.||||||||.||||||||||||.||||.||.||||||||.||||||||..|||||||||||||
Sbjct 283 AACAACCTGTACATGGAACTGAATGCCCTCATGCTGCAACTAGAACTCAAAGAGAGGGAATTGCTCAGGCGAGA 356
Query 1383 GCAAGCTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAA 1456
|||.||||||||..||.||||.||.||.||.||.|||.||||||||||.|||||||||||.|||||||||||.|
Sbjct 357 GCAGGCTTTAGAAAGGCGGTGTCCTGGTCTACTAAAGTCACACCCTTCTCGGGGCCTCCTACATGGAAACACTA 430
Query 1457 TGGAGAAGCTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCTCAAG 1530
||||||||||.||||||||.|||||.|||||||||||.|||||.|||||.|||||||||||||||||.||||||
Sbjct 431 TGGAGAAGCTCATCAAGAAAAGGAACGTGCCACAGAAACTGTCGCCCCACAGCAAAAGGCCAGATATTCTCAAG 504
Query 1531 ACGGAGTCTTTGCTCCCTAAACTAGATGCAGCCCTGAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCC 1604
||.|||||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 505 ACAGAGTCGTTGCTACCTAAACTAGATGCAGCCCTAAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCC 578
Query 1605 CTCACCAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGC 1678
.|||||.|||.|||||||.||||||||||||||||||||.||||||||.||||||||.||||||||.|||||||
Sbjct 579 TTCACCTGGAAGGAGTCGGCGTGGCAAGACCCGTCACCGAAAGGCCAGTGCCAAGGGCAGCTGTGGAGACCTGC 652
Query 1679 CTGGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGCCTAGGAGGGGGACCC 1752
|||||||||||.|||||.|||||||||||||.||||||||||.|||||||||||||||||||||||.|||.||.
Sbjct 653 CTGGGCTTCGTGCAGCTTTGCCACCCCATGAGCCTGGAGGACTAGGAAGCCCAGGGGGCCTAGGAGTGGGCCCT 726
Query 1753 TCAGCCTGGGAGGCCTGCCCTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCATC 1826
|||||.|||||.||.|||||.||.||.||||||||.||.||.||||||||.||.|||||.||.|||||.|||||
Sbjct 727 TCAGCTTGGGATGCTTGCCCCCCTGCTCTCCGTGGACTCCACCATGACCTTCTACTCCGAAAGATGTCATCATC 800
Query 1827 GTCCCCAGACCTGCTGTCAGCAGCACTAGGGTCCCGGGGCCGGGGGGCCACAGGCGGAGCTGGGGATCCTGGCT 1900
.||||||||||||||.||||||||.||.||..||||.|||||.|||||.|||||.||||||.||||||||||||
Sbjct 801 ATCCCCAGACCTGCTATCAGCAGCGCTGGGAGCCCGAGGCCGAGGGGCTACAGGGGGAGCTCGGGATCCTGGCT 874
Query 1901 CACCACCTCCGGCCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCT 1974
||||||||||..|||.|||.||.||.||.|||||||||||.|||||.|||||.|||||||||||||||||.|||
Sbjct 875 CACCACCTCCACCCCAGGGCGATACTCCTCCAAGTGAGGGATCAGCTCCTGGTTCCACCAGCCCAGATTCGCCT 948
Query 1975 GGGGGAGCCAAAGGGGAACCACCTCCTCC-------CCTC---------------------------------- 2007
||||||||.|||||||||||.|||||.|| |||.
Sbjct 949 GGGGGAGCTAAAGGGGAACCCCCTCCACCAGTAGGGCCTGGAGAAGGTGTGGGGCTGCTGGGAACTGGAAGGGA 1022
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1023 AGGGACTGCAGGCCGGGGAGGAAACCGGGCTGGGTCCCAGCACTTGACCCCCGCTGCGCTGCTGTACAGGGCTG 1096
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1097 CTGTGACTCGAAGTCAGAAACGTGGTATCTCATCTGAAGAAGAAGAAGGAGAGGTAGACAGTGAAGTAGAGCTA 1170
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1171 CCCCCAAGTCAAAGGTGGCCTCAGGGCCCGAACATGCGTCAGTCACTATCTACATTCAGCTCAGAGAACCCATC 1244
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1245 AGATGTGGAGGAAGGTACAGCTAGTGAGCCTTCCCCAAGTGGCACACCAGAAGTTGGCAGTACCAACACTGATG 1318
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1319 AGCGACCAGATGAACGATCTGATGACATGTGCTCACAGGGCTCAGAAATTCCACTGGACCTACCTACTTCAGAG 1392
Query 2008 -------------------------------------------------------------------------- 2007
Sbjct 1393 GTGGTCCCTGAACGTGAAGCCAGCTCCTTGCCCATGCAACACCAGGATGGCCAGGGCCCCAATCCTGAAGACTC 1466
Query 2008 ------------------------------------------------------------------------- 2007
Sbjct 1467 AGACTGTGACAGCACTGAATTGGACAACTCCAACAGCATTGATGCCTTGCGGCCCCCAGCCTCCCTTCCTCCA 1539
