Nucleotide Global Alignment
Description
- Query:
- TRCN0000491519
- Subject:
- XR_001781538.1
- Aligned Length:
- 2763
- Identities:
- 1295
- Gaps:
- 1336
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCACCCCCTTAGCATATGTTAGTTACACATTTTAATGGGTTTCACTGTTACATTTTCATACGTGTGTGTAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTACTTGATCACCCATATTCCCCATAACTCTGGTTCCATCGTTCCCATAGCCTCCTTGTCTCCTTACATTGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATCGGTTTTTGTTTTGTTTTTTGTTTTGTTTTTGTGACCCACAGAGTTTAACTAGGTTTGCAAATAGGATCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAATGAGGGTTAATTTACAGTATCACTAGCACCTTATCAATGGCTATACCATCAAAGAAAATGGCTTTCCTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCAGCAACCATTAGCTGCATGTATAGTCTCAACAATAGAGGACCAGAGGGAGGGAAGAGGTGATGTGGTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCCCTCCATATCTCAGGATTGCATGTTCACATATCCAATATGTGATAATCACTATATTTTATGCTGATAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTATATCCCTAGAGTTTATGGGTTTGTTTGTTTGTTTGTTTGTTTTTAAGACAAACTTTCACTCTATAGCCTAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGCCTGAAACTCACTATGAAGCCAGAGATGACCTTGAACTTCTGATCCTCTCACCTCCATCCCTGAGTGCT 592
Query 1 --------------------------------------------ATGGCTTGCCTCCATGAGACCCGAACACCC 30
|||||.|||||||||||.||||||||||||
Sbjct 593 GGGACTGCTGGGCCCGCTGCTCAGCACACCTGGCTCCAGAGGCCATGGCCTGCCTCCATGAAACCCGAACACCC 666
Query 31 TCTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACACTTCTGA 104
||.||||||||||||||||||||||||||.|||||||||||.||.|||||.||||||||.|||||||||||.||
Sbjct 667 TCCCCTTCCTTTGGGGGCTTTGTGTCTACTCTAAGTGAGGCTTCTATGCGAAAGCTGGATCCAGACACTTCAGA 740
Query 105 CTGCACTCCCGAGAAGGACCTGACGCCTACCCA----------------------------------------- 137
||||||.||||||||.|||||||||||.|||||
Sbjct 741 CTGCACCCCCGAGAAAGACCTGACGCCCACCCAATGTGTACTTCGAGATGTTGTGCCTCTCGGTGGGCAGGGTG 814
Query 138 ----------------------------------------------------------TGTCCTGCAGCTACAT 153
||||||.|||||||||
Sbjct 815 GAGGAGGACCCAGCCCCTCCCCAGGTGGAGAGCCTCCCCCAGAGCCTTTTGCCAATAGTGTCCTCCAGCTACAT 888
Query 154 GAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACGA 227
|||||||||.||||.||.|||||||||||..|||||||||||||||||||.|||||.||||||||||||||.||
Sbjct 889 GAGCAGGATACAGGTGGGCCAGGGGGAGCCACTGGGTCACCTGAGAGTCGAGCATCTAGAGTTCGAGCTGATGA 962
Query 228 GGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCCTCTTTGGCTGCCTGCGCCCTGTCTGGACCA 301
|||.||.||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||.|
Sbjct 963 GGTACGTCTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAAGGTCTTTTTGGCTGCCTGCGCCCTGTCTGGACAA 1036
Query 302 TGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGAGGTCCCCTTTGAGGAAATC 375
||||||||||||||||||||||.||.||||||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1037 TGATTGGCAAAGCCTACTCCACAGAACACAAGCAACAGCAGGAAGACCTTTGGGAAGTCCCCTTTGAGGAAATC 1110
Query 376 CTGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTTCCTGGGGCGCTTCCACGGGGAGGAGGTGGC 449
|||||||||||||||||.|||||||||||.|||||||||||.||||||||.||||||||||||||||||||.||
Sbjct 1111 CTGGACCTGCAGTGGGTAGGCTCAGGGGCTCAGGGTGCTGTTTTCCTGGGACGCTTCCACGGGGAGGAGGTAGC 1184
Query 450 TGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCA-CTTGCGAAAGCTGAAGCACCCCAACATCATC 522
||||||||||||.|||||.|||||.||.||.||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 1185 TGTGAAGAAGGTTCGAGATCTCAAGGAGACTGACATCAAGCATCTT-CGAAAGCTGAAGCACCCCAACATCATC 1257
Query 523 ACTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTA 596
||||||||||||||.|||||.|||||.|||||||||||||||||.|||||.||||||||.||.||.|||||.||
Sbjct 1258 ACTTTCAAGGGTGTTTGCACACAGGCCCCCTGCTACTGCATCCTTATGGAATTCTGCGCTCAAGGACAGCTATA 1331
Query 597 TGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGTTGACTGGTCCATGGGCATCGCTGGTGGCA 670
||||||.||..|.||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1332 TGAGGTGCTCAGAGCCGGCCGCCCTGTCACCCCCTCCTTGCTGGTTGACTGGTCCATGGGCATCGCTGGTGGCA 1405
Query 671 TGAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAACATGCTAATCACCTACGACGAT 744
||||.|||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||.|||||||||
Sbjct 1406 TGAATTACCTGCACCTGCACAAGATTATCCACAGAGACCTGAAGTCACCCAACATGCTAATCACATACGACGAT 1479
Query 745 GTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGGAC 818
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1480 GTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGAAC 1553
Query 819 AGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGAGAAGGTCGACATCTGGTCCTTTGGCG 892
|||||||||||||||.|||||.||||||.|.|||||||||||||||||||||||.|||||||||||||||||.|
Sbjct 1554 AGTAGCCTGGATGGCTCCTGAAGTGATCAGAAATGAACCTGTGTCTGAGAAGGTTGACATCTGGTCCTTTGGGG 1627
Query 893 TGGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGACGTAGATTCCTCAGCCATTATCTGGGGTGTG 966
||||||||||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||||||
Sbjct 1628 TGGTGCTATGGGAACTACTGACTGGAGAGATTCCCTACAAAGATGTAGATTCCTCAGCCATCATCTGGGGTGTG 1701
Query 967 GGAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTG 1040
|||||||||||||||||.|||||.||.||||||||.||||||||||||||.||.||.||.||||||||||||||
Sbjct 1702 GGAAGCAACAGTCTCCACCTGCCTGTACCCTCCAGCTGCCCAGATGGTTTTAAAATTCTACTTCGCCAGTGCTG 1775
Query 1041 GAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCTGCATCTGGACATTGCCTCAGCTGATGTAC 1114
|||.||||||||||||||||||||||||||||||||||||.|||||||.||||||||.|||||.||||||||.|
Sbjct 1776 GAACAGCAAACCACGAAATCGCCCATCATTCCGACAGATCTTGCTGCACCTGGACATCGCCTCCGCTGATGTGC 1849
Query 1115 TCTCCACACCCCAGGAGACTTACTTTAAGTCCCAGG-------CAGAGTGGCGGGAAGAAGTAAAACTGCACTT 1181
||||.||||||||||||||||||||||||||||||| ||...||| ||| |||..
Sbjct 1850 TCTCTACACCCCAGGAGACTTACTTTAAGTCCCAGGAACCATTCATCATGG--------AGT-------CACAG 1908
Query 1182 TGAAAAG------ATTAAGTCAGAAGGGA--CCTGTCTGCACCGCCT-AGAAGAGGAACTGGTGATGAGGAGGA 1246
.|||.|| .||..|.||.|||.|| ||.| || ||||| | .|||.|..|.||
Sbjct 1909 AGAACAGGGTCCATTTCGGCCACAAGCGAACCCAG-CT-CACCG--TGGGAAAATCATCT-------------- 1964
Query 1247 GGGAGGAGC----TCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAGCCAACAACCT 1316
|| |||||||.|||||||||||||||||||||||||||.|||||.|||||||||||||||||||
Sbjct 1965 -------GCCCTTTCAGACATGCCCTGGACATCAGGGAGCACTATGAACGGAAGTTGGAGAGAGCCAACAACCT 2031
Query 1317 GTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTT 1390
|||.||||||||.||||||||||||.||||.||.||||||||.||||||||..||||||||||||||||.||||
Sbjct 2032 GTACATGGAACTGAATGCCCTCATGCTGCAACTAGAACTCAAAGAGAGGGAATTGCTCAGGCGAGAGCAGGCTT 2105
Query 1391 TAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAG 1464
||||..||.||||.||.||.||.||.|||.||||||||||.|||||||||||.|||||||||||.|||||||||
Sbjct 2106 TAGAAAGGCGGTGTCCTGGTCTACTAAAGTCACACCCTTCTCGGGGCCTCCTACATGGAAACACTATGGAGAAG 2179
Query 1465 CTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCTCAAGACGGAGTC 1538
||.|
Sbjct 2180 CTCA---------------------------------------------------------------------- 2183
Query 1539 TTTGCTCCCTAAACTAGATGCAGCCCTGAGTGGGGTGGGGCTTCCTGGGTGTCCTAAGGGCCCCCCCTCACCAG 1612
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1613 GACGGAGTCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGCCTGGGCTT 1686
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1687 CGTACAGCTGTGCCACCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGCCTAGGAGGGGGACCCTCAGCCTG 1760
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1761 GGAGGCCTGCCCTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGTCCCCAG 1834
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1835 ACCTGCTGTCAGCAGCACTAGGGTCCCGGGGCCGGGGGGCCACAGGCGGAGCTGGGGATCCTGGCTCACCACCT 1908
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1909 CCGGCCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGC 1982
Sbjct 2184 -------------------------------------------------------------------------- 2183
Query 1983 CAAAGGGGAACCACCTCCTCCCCTC 2007
Sbjct 2184 ------------------------- 2183
